Pre_GI: BLASTP Hits

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Query: NC_015275:654959:665010 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 665010, End: 666170, Length: 1161

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014633:713285:7294997294997306501152Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencePucR family transcriptional regulator2e-45183
NC_021182:1077721:1082388108238810836081221Clostridium pasteurianum BC1, complete genomepurine catabolism regulator-like protein7e-34145
NC_017078:247045:2665012665012676731173Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative transcriptional regulator2e-30133
NC_009633:712500:7266587266587278931236Alkaliphilus metalliredigens QYMF chromosome, complete genomePucR family transcriptional regulator2e-1480.1
NC_020210:1275031:1322407132240713240291623Geobacillus sp. GHH01, complete genometranscriptional regulator PucR family4e-1375.9
NC_016593:1527456:1541211154121115428391629Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, PucR1e-1274.7
NC_012914:5372712:5382379538237953839921614Paenibacillus sp. JDR-2, complete genometranscriptional regulator, CdaR2e-1274.3
NC_014915:1376035:1389782138978213914101629Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, PucR family3e-1273.2
NC_013411:2236166:2249838224983822514661629Geobacillus sp. Y412MC61, complete genometranscriptional regulator, PucR family3e-1273.2
NC_006510:1446490:1460168146016814617961629Geobacillus kaustophilus HTA426, complete genomehypothetical protein3e-1273.2
NC_007644:2205599:2222659222265922243201662Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, CdaR1e-1170.9
NC_009922:944538:9500319500319516921662Alkaliphilus oremlandii OhILAs, complete genome3e-1170.1
NC_015172:951550:9598089598089609861179Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, CdaR3e-1169.7
NC_010397:815549:8207628207628222821521Mycobacterium abscessus chromosome Chromosome, complete sequenceHypothetical peptidase4e-1169.3
NC_014829:988980:1010582101058210122641683Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, PucR family3e-1066.6
NC_016604:2944555:2946429294642929481711743Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein3e-1066.2
NC_014210:2638773:2655191265519126567531563Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, CdaR4e-1066.2
NC_004668:1010610:1030956103095610326261671Enterococcus faecalis V583, complete genomehypothetical protein9e-1065.1
NC_013165:413098:4370054370054383121308Slackia heliotrinireducens DSM 20476, complete genomehypothetical protein2e-0964.3
NC_007907:3872805:3874445387444538756681224Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0861.2
NC_011959:131800:1318001318001333351536Thermomicrobium roseum DSM 5159, complete genomehelix-turn-helix, Fis-type1e-0861.2
NC_016023:1839503:186109818610981861964867Bacillus coagulans 36D1 chromosome, complete genomeputative PucR family transcriptional regulator2e-0860.5
NC_015958:2251619:226591522659152266721807Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeputative PucR family transcriptional regulator4e-0859.7
NC_009848:3582384:3597045359704535981571113Bacillus pumilus SAFR-032, complete genomesugar diacid utilization regulator6e-0858.9
NC_007333:2093167:2096318209631820978771560Thermobifida fusca YX, complete genomehelix-turn-helix, Fis-type8e-0858.5
NC_012914:5618000:5640716564071656422901575Paenibacillus sp. JDR-2, complete genometranscriptional regulator, PucR family7e-0858.5
NC_018750:770500:7876197876197895171899Streptomyces venezuelae ATCC 10712, complete genomeRegulator of polyketide synthase expression1e-0757.8
NC_008697:118859:1497331497331514241692Nocardioides sp. JS614 plasmid pNOCA01, complete sequencehypothetical protein1e-0757.8
NC_014829:1475000:1487324148732414889401617Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, CdaR1e-0757.8
NC_018581:4992952:5014521501452150156631143Gordonia sp. KTR9 chromosome, complete genometranscriptional regulator, CdaR1e-0757.8
NC_020210:2133996:2200219220021922018351617Geobacillus sp. GHH01, complete genomepurine catabolism regulatory protein3e-0756.6
NC_014830:1252249:1287378128737812885531176Intrasporangium calvum DSM 43043 chromosome, complete genometranscriptional regulator, CdaR4e-0756.2
NC_009328:2378345:2390632239063223923681737Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein7e-0755.5
NC_009454:259022:2753762753762769711596Pelotomaculum thermopropionicum SI, complete genomeregulator of polyketide synthase expression1e-0654.7
NC_011830:1923158:1927219192721919289071689Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, PucR family1e-0654.7
NC_013523:2560000:2566516256651625684531938Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genometranscriptional regulator, CdaR3e-0653.5
NC_021182:4058873:4072227407222740738551629Clostridium pasteurianum BC1, complete genomepurine catabolism regulator-like protein3e-0653.1
NC_009328:2378345:2405166240516624068481683Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein4e-0652.8
NC_010001:2125500:2142860214286021444221563Clostridium phytofermentans ISDg, complete genometranscriptional regulator, CdaR4e-0652.8
NC_014220:1732254:1739146173914617403361191Syntrophothermus lipocalidus DSM 12680 chromosome, complete genometranscriptional regulator, CdaR1e-0551.6