Pre_GI: BLASTP Hits

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Query: NC_015275:3594890:3596624 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 3596624, End: 3597184, Length: 561

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014019:3543389:356517835651783565735558Bacillus megaterium QM B1551 chromosome, complete genometranscriptional regulator, TetR family2e-1685.5
NC_014328:4316008:434294343429434343494552Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator4e-1064.7
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family4e-0754.3
NC_017098:1149145:115123711512371151950714Spirochaeta africana DSM 8902 chromosome, complete genometranscriptional regulator2e-0652.4
NC_020054:2679676:269998826999882700617630Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, TetR family5e-0650.8