Pre_GI: BLASTP Hits

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Query: NC_015275:3299923:3313547 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 3313547, End: 3314023, Length: 477

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012563:4101000:411587741158774116353477Clostridium botulinum A2 str. Kyoto, complete genometranscriptional regulator, MarR family2e-38157
NC_010516:3903867:391871239187123919188477Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator, MarR family3e-38157
NC_009495:3832500:384735938473593847835477Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeMarR family transcriptional regulator6e-38156
NC_009697:3809044:382389338238933824369477Clostridium botulinum A str. ATCC 19397 chromosome, completeMarR family transcriptional regulator6e-38156
NC_010520:3938490:395335339533533953829477Clostridium botulinum A3 str. Loch Maree, complete genometranscriptional regulator, MarR family5e-38156
NC_012658:3923546:393841339384133938889477Clostridium botulinum Ba4 str. 657 chromosome, complete genomeMarR family transcriptional regulator5e-38156
NC_009698:3706154:372100337210033721479477Clostridium botulinum A str. Hall chromosome, complete genomeMarR family transcriptional regulator2e-37154
NC_004557:81362:859488594886403456Clostridium tetani E88, complete genometranscriptional regulator, marR family8e-37152
NC_017297:3939328:395418039541803954656477Clostridium botulinum F str. 230613 chromosome, complete genomeMarR family transcriptional regulator7e-36149
NC_009699:3940984:395583739558373956313477Clostridium botulinum F str. Langeland chromosome, complete genomeMarR family transcriptional regulator7e-36149
NC_004668:2762464:276372527637252764177453Enterococcus faecalis V583, complete genometranscriptional regulator, MarR family5e-35146
NC_008593:37456:420304203042500471Clostridium novyi NT, complete genometranscriptional regulator, MarR family1e-33142
NC_015425:34861:412974129741770474Clostridium botulinum BKT015925 chromosome, complete genomeMarR family transcriptional regulator4e-33140
NC_017295:3762622:377774937777493778213465Clostridium acetobutylicum EA 2018 chromosome, complete genomeTranscriptional regulator, MarR/EmrR family2e-32138
NC_003030:3763054:377839737783973778861465Clostridium acetobutylicum ATCC 824, complete genomeTranscriptional regulator, MarR/EmrR family2e-32138
NC_015687:3766000:377998037799803780444465Clostridium acetobutylicum DSM 1731 chromosome, complete genomeMarR family transcriptional regulator2e-32138
NC_021182:4882494:489591748959174896384468Clostridium pasteurianum BC1, complete genometranscriptional regulator3e-32137
NC_014393:4988127:500199150019915002452462Clostridium cellulovorans 743B chromosome, complete genomeregulatory protein MarR1e-31135
NC_010723:1133163:113855311385531139002450Clostridium botulinum E3 str. Alaska E43, complete genomeMarR-family transcriptional regulator2e-31134
NC_020291:1266885:128943012894301289879450Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, MarR family1e-30132
NC_010674:1170264:117469911746991175148450Clostridium botulinum B str. Eklund 17B, complete genomeMarR-family transcriptional regulator6e-31132
NC_015391:1323171:133944613394461339895450Carnobacterium sp. 17-4 chromosome, complete genomeputative transcriptional regulator3e-30130
NC_009617:1278000:128011812801181280567450Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeMarR family transcriptional regulator6e-30129
NC_014328:4546390:456014745601474560623477Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative MarR family transcriptional regulator2e-28124
NC_016938:1492486:150347315034731503910438Melissococcus plutonius DAT561 chromosome 1, complete genomeMarR family transcriptional regulator9e-26115
NC_006448:351998:372814372814373248435Streptococcus thermophilus LMG 18311, complete genometranscriptional regulator, MarR family1e-22105
NC_007929:473500:499199499199499639441Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, MarR family2e-22104
NC_013928:395028:415234415234415668435Streptococcus mutans NN2025, complete genometranscriptional regulator1e-21102
NC_010163:63209:816968169682133438Acholeplasma laidlawii PG-8A chromosome, complete genomeMarR family transcriptional regulator4e-2097.1
NC_015977:3011177:303536230353623035814453Roseburia hominis A2-183 chromosome, complete genomeMarR family transcriptional regulator6e-1993.2
NC_015602:1949610:194961019496101950077468Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeMarR family transcriptional regulator1e-1685.1
NC_018528:1932000:195252719525271952994468Lactobacillus helveticus R0052 chromosome, complete genomeMarR family transcriptional regulator2e-1684.7
NC_015574:806762:807398807398807838441Methanobacterium sp. SWAN-1 chromosome, complete genomeMarR family transcriptional regulator2e-0652
NC_011725:334000:338817338817339299483Bacillus cereus B4264 chromosome, complete genomeMarR family transcriptional regulator3e-0651.2
NC_014171:343834:347511347511347993483Bacillus thuringiensis BMB171 chromosome, complete genomeMarR family transcriptional regulator3e-0651.2
NC_016779:312500:327713327713328072360Bacillus cereus F837/76 chromosome, complete genomeMarR family transcriptional regulator2e-0651.2
NC_011772:323050:325020325020325502483Bacillus cereus G9842, complete genometranscriptional regulator, MarR family2e-0651.2
NC_007181:1766910:176691017669101767353444Sulfolobus acidocaldarius DSM 639, complete genomeconserved Prokaryal protein5e-0650.4
NC_004193:375416:471200471200471631432Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator5e-0650.1
NC_020389:1936000:195655219565521957028477Methanosarcina mazei Tuc01, complete genomeTranscriptional regulator, MarR family6e-0650.1
NC_016791:3953972:398156539815653982005441Clostridium sp. BNL1100 chromosome, complete genometranscriptional regulator6e-0650.1