Pre_GI: BLASTP Hits

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Query: NC_015275:1:2827 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 2827, End: 3033, Length: 207

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003366:1:330433043510207Clostridium perfringens str. 13, complete genomehypothetical protein3e-1683.6
NC_008261:1:330533053511207Clostridium perfringens ATCC 13124, complete genomeS4 domain protein3e-1683.6
NC_008262:1:312931293335207Clostridium perfringens SM101, complete genomeS4 domain protein3e-1683.6
NC_014393:1:299529953252258Clostridium cellulovorans 743B chromosome, complete genomeS4 domain-containing protein YaaA5e-1579.7
NC_018664:1:285728573069213Clostridium acidurici 9a chromosome, complete genomeRNA-binding S4 domain-containing protein3e-1477
NC_003030:1:319531953401207Clostridium acetobutylicum ATCC 824, complete genomeSmall conserved protein, ortholog of YAAA B.subtilis6e-1476.3
NC_015687:1:319531953401207Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein6e-1476.3
NC_008593:2527064:254454325445432544749207Clostridium novyi NT, complete genomeS4 domain protein2e-1374.7
NC_020291:1:285528553061207Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA-binding S4 domain-containing protein1e-1271.6
NC_014378:525717:307530753284210Acetohalobium arabaticum DSM 5501 chromosome, complete genomeRNA-binding S4 domain protein2e-1271.2
NC_014973:4630132:464848946484894648686198Geobacter sp. M18 chromosome, complete genomeRNA-binding S4 domain-containing protein3e-1270.5
NC_010674:1:294529453151207Clostridium botulinum B str. Eklund 17B, complete genomeS4 domain protein YaaA1e-1168.9
NC_010723:1:289728973103207Clostridium botulinum E3 str. Alaska E43, complete genomeS4 domain protein YaaA1e-1168.9
NC_014328:1:284128413047207Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein1e-1065.5
NC_009089:1:280528053011207Clostridium difficile 630, complete genomeputative RNA-binding mediating protein9e-1165.5
NC_013192:2434664:273227322959228Leptotrichia buccalis DSM 1135, complete genomeS4 domain protein YaaA1e-1065.1
NC_011297:1357947:137723113772311377446216Dictyoglomus thermophilum H-6-12, complete genomehypothetical protein2e-1064.7
NC_009922:1:284628463061216Alkaliphilus oremlandii OhILAs, complete genomeRNA-binding S4 domain protein2e-1064.7
NC_015425:2752482:276998027699802770186207Clostridium botulinum BKT015925 chromosome, complete genomeS4 domain-containing protein2e-1064.3
NC_010520:1:273727372943207Clostridium botulinum A3 str. Loch Maree, complete genomeS4 domain protein2e-1064.3
NC_021182:1:317031703376207Clostridium pasteurianum BC1, complete genomehypothetical protein3e-1063.9
NC_014152:1:277527752999225Thermincola sp. JR, complete genomeRNA-binding S4 domain protein3e-1063.9
NC_010814:155834:164012164012164230219Geobacter lovleyi SZ, complete genomeS4 domain protein YaaA5e-1063.2
NC_010516:1:276027602966207Clostridium botulinum B1 str. Okra, complete genomeS4 domain protein9e-1062.4
NC_012563:1:287928793085207Clostridium botulinum A2 str. Kyoto, complete genomeS4 domain protein9e-1062.4
NC_009495:1:273227322938207Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeS4 domain-containing protein9e-1062.4
NC_009697:1:273227322938207Clostridium botulinum A str. ATCC 19397 chromosome, completeS4 domain-containing protein9e-1062.4
NC_009698:1:273227322938207Clostridium botulinum A str. Hall chromosome, complete genomeS4 domain-containing protein9e-1062.4
NC_009699:1:272327232929207Clostridium botulinum F str. Langeland chromosome, complete genomeS4 domain-containing protein9e-1062.4
NC_017297:1:272327232929207Clostridium botulinum F str. 230613 chromosome, complete genomeS4 domain-containing protein9e-1062.4
NC_006177:3549467:271827182945228Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein1e-0961.6
NC_012658:1:289628963102207Clostridium botulinum Ba4 str. 657 chromosome, complete genomeS4 domain-containing protein1e-0961.6
NC_014654:1:288928893107219Halanaerobium sp. 'sapolanicus' chromosome, complete genomeRNA-binding S4 domain protein3e-0960.8
NC_009706:1:274627462952207Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-0960.5
NC_011837:1:274627462952207Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-0960.5
NC_010718:1:291229123133222Natranaerobius thermophilus JW/NM-WN-LF, complete genomeS4-like RNA binding protein7e-0959.3
NC_018665:1:327232723493222Exiguobacterium antarcticum B7 chromosome, complete genomeS4 domain protein YaaA2e-0858.2
NC_015519:2739347:285428543075222Tepidanaerobacter sp. Re1 chromosome, complete genomeRNA-binding S4 domain-containing protein2e-0857.8
NC_011567:1:313631363348213Anoxybacillus flavithermus WK1, complete genomeS4-like RNA binding protein1e-0755.1
NC_010001:1:309930993314216Clostridium phytofermentans ISDg, complete genomeRNA-binding S4 domain protein2e-0754.7
NC_017317:134671:143442143442143732291Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein3e-0753.9
NC_015690:8645500:274927492964216Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYaaA4e-0753.5
NC_013171:1:297829783184207Anaerococcus prevotii DSM 20548, complete genomeS4 domain-containing protein6e-0752.8
NC_012673:1679744:169743216974321697647216Exiguobacterium sp. AT1b, complete genomeS4 domain protein YaaA8e-0752.4
NC_007929:1805000:308830883309222Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein1e-0652
NC_008319:1081614:108923710892371089461225Synechococcus sp. CC9311, complete genomeS4 domain protein2e-0651.6
NC_009092:2902171:290468629046862904916231Shewanella loihica PV-4, complete genomeRNA-binding S4 domain protein2e-0650.8
NC_012704:57437:755677556775908342Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein4e-0650.4
NC_007644:3229:308130813266186Moorella thermoacetica ATCC 39073, complete genomeRNA-binding S43e-0650.4
NC_017208:1:307530753287213Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein3e-0650.4
NC_013016:354000:377039377039377272234Neisseria meningitidis alpha14 chromosome, complete genomeputative RNA-binding protein4e-0650.1
NC_014171:1:307530753287213Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein4e-0650.1
NC_001263:1378605:139623013962301396544315Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein6e-0649.7
NC_011146:482440:490129490129490326198Geobacter bemidjiensis Bem, complete genomeRNA-binding S4 domain protein8e-0649.3