Query: NC_015224:2017781 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,
Start: 2017781, End: 2040352, Length: 22572
Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009778:1222273 | 1222273 | 1248844 | 26572 | Enterobacter sakazakii ATCC BAA-894, complete genome | 1e-116 | 428 | BLASTN svg | BLASTP svg |
| NC_014562:1844268 | 1844268 | 1876326 | 32059 | Pantoea vagans C9-1 chromosome, complete genome | 4e-113 | 416 | BLASTN svg | BLASTP svg |
| NC_014837:2586870 | 2586870 | 2611292 | 24423 | Pantoea sp. At-9b chromosome, complete genome | 1e-110 | 408 | BLASTN svg | BLASTP svg |
| NC_012917:2921932* | 2921932 | 2950501 | 28570 | Pectobacterium carotovorum subsp. carotovorum PC1, complete genome | 2e-105 | 391 | BLASTN svg | BLASTP svg |
| NC_014500:3023762* | 3023762 | 3061700 | 37939 | Dickeya dadantii 3937 chromosome, complete genome | 1e-88 | 335 | BLASTN svg | BLASTP svg |
| NC_012912:1788308* | 1788308 | 1846627 | 58320 | Dickeya zeae Ech1591, complete genome | 7e-87 | 329 | BLASTN svg | BLASTP svg |
| NC_013592:1730505* | 1730505 | 1763165 | 32661 | Dickeya dadantii Ech586, complete genome | 2e-84 | 321 | BLASTN svg | BLASTP svg |
| NC_013956:4490000 | 4490000 | 4513709 | 23710 | Pantoea ananatis LMG 20103 chromosome, complete genome | 8e-62 | 246 | BLASTN svg | BLASTP svg |
| NC_015968:2845751 | 2845751 | 2882221 | 36471 | Enterobacter asburiae LF7a chromosome, complete genome | 3e-61 | 244 | BLASTN svg | BLASTP svg |
| NC_013956:2523955 | 2523955 | 2544160 | 20206 | Pantoea ananatis LMG 20103 chromosome, complete genome | 2e-47 | 198 | BLASTN svg | BLASTP svg |
| NC_012880:1765920* | 1765920 | 1843830 | 77911 | Dickeya dadantii Ech703, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
| NC_003197:2894344* | 2894344 | 2942880 | 48537 | Salmonella typhimurium LT2, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
| NC_006511:2718401 | 2718401 | 2737051 | 18651 | Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC | 4e-42 | 180 | BLASTN svg | BLASTP svg |
| NC_010102:2862178 | 2862178 | 2880126 | 17949 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 4e-42 | 180 | BLASTN svg | BLASTP svg |
| NC_011080:2870428 | 2870428 | 2894130 | 23703 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 4e-42 | 180 | BLASTN svg | BLASTP svg |
| NC_011083:2847318* | 2847318 | 2917391 | 70074 | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, | 4e-42 | 180 | BLASTN svg | BLASTP svg |
| NC_004547:1970686* | 1970686 | 1996513 | 25828 | Erwinia carotovora subsp. atroseptica SCRI1043, complete genome | 6e-32 | 147 | BLASTN svg | BLASTP svg |
| NC_012779:2281700* | 2281700 | 2305599 | 23900 | Edwardsiella ictaluri 93-146, complete genome | 9e-31 | 143 | BLASTN svg | BLASTP svg |
| NC_006905:2857699 | 2857699 | 2899093 | 41395 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 4e-30 | 141 | BLASTN svg | BLASTP svg |
| NC_011740:1189455* | 1189455 | 1212599 | 23145 | Escherichia fergusonii ATCC 35469, complete genome | 5e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_014121:1357339 | 1357339 | 1383127 | 25789 | Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_019940:293476* | 293476 | 311504 | 18029 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_015731:990000* | 990000 | 1012761 | 22762 | Nitrosomonas sp. Is79A3 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_011080:2761403* | 2761403 | 2779599 | 18197 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |