Pre_GI: BLASTN Hits

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Query: NC_015224:1763848 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 1763848, End: 1798250, Length: 34403

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02936BLASTN svgBLASTP svg
NC_015061:19022511902251193341231162Rahnella sp. Y9602 chromosome, complete genome01092BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02690BLASTN svgBLASTP svg
NC_015224:3225000*3225000325159926600Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02710BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02821BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02827BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02839BLASTN svgBLASTP svg
NC_015224:10673901067390110671739328Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02845BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02878BLASTN svgBLASTP svg
NC_015224:14402831440283145849618214Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02886BLASTN svgBLASTP svg
NC_015224:88953688953690956920034Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02892BLASTN svgBLASTP svg
NC_014562:20499212049921207971629796Pantoea vagans C9-1 chromosome, complete genome2e-177630BLASTN svgBLASTP svg
NC_014306:32103113210311325712846818Erwinia billingiae Eb661, complete genome5e-172613BLASTN svgBLASTP svg
NC_012917:15060831506083154696940887Pectobacterium carotovorum subsp. carotovorum PC1, complete genome3e-158567BLASTN svgBLASTP svg
NC_014837:2803447*2803447283151828072Pantoea sp. At-9b chromosome, complete genome2e-156561BLASTN svgBLASTP svg
NC_013282:28277572827757286060332847Cronobacter turicensis, complete genome3e-136494BLASTN svgBLASTP svg
NC_014121:33996853399685343519435510Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-135490BLASTN svgBLASTP svg
NC_015968:29753512975351299850323153Enterobacter asburiae LF7a chromosome, complete genome1e-132482BLASTN svgBLASTP svg
NC_013421:32794993279499331516735669Pectobacterium wasabiae WPP163, complete genome2e-128468BLASTN svgBLASTP svg
NC_013961:2260250*2260250228983729588Erwinia amylovora, complete genome1e-126462BLASTN svgBLASTP svg
NC_010694:15020191502019153332131303Erwinia tasmaniensis, complete genome7e-125456BLASTN svgBLASTP svg
NC_009792:71495371495374483829886Citrobacter koseri ATCC BAA-895, complete genome1e-120442BLASTN svgBLASTP svg
NC_010498:10354061035406106309927694Escherichia coli SMS-3-5, complete genome4e-120440BLASTN svgBLASTP svg
NC_009832:17191491719149175798638838Serratia proteamaculans 568, complete genome6e-116426BLASTN svgBLASTP svg
NC_011750:10349191034919106622831310Escherichia coli IAI39 chromosome, complete genome3e-115424BLASTN svgBLASTP svg
NC_009778:11417161141716117336531650Enterobacter sakazakii ATCC BAA-894, complete genome6e-110406BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome9e-109402BLASTN svgBLASTP svg
NC_011740:21351412135141215307917939Escherichia fergusonii ATCC 35469, complete genome4e-108400BLASTN svgBLASTP svg
NC_010468:17750001775000180518230183Escherichia coli ATCC 8739, complete genome4e-108400BLASTN svgBLASTP svg
NC_008563:21822702182270221156429295Escherichia coli APEC O1, complete genome4e-108400BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome4e-108400BLASTN svgBLASTP svg
NC_020063:16597951659795169109931305Enterobacteriaceae bacterium strain FGI 57, complete genome1e-107398BLASTN svgBLASTP svg
NC_007606:19998701999870202709927230Shigella dysenteriae Sd197, complete genome9e-106392BLASTN svgBLASTP svg
CU928160:21559472155947218736531419Escherichia coli IAI1 chromosome, complete genome6e-104387BLASTN svgBLASTP svg
NC_009648:26997392699739273776838030Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-103385BLASTN svgBLASTP svg
NC_013956:27496852749685278184532161Pantoea ananatis LMG 20103 chromosome, complete genome9e-103383BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome5e-101377BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome5e-101377BLASTN svgBLASTP svg
NC_021066:46029246029251915858867Raoultella ornithinolytica B6, complete genome2e-100375BLASTN svgBLASTP svg
NC_011751:23958822395882242503029149Escherichia coli UMN026 chromosome, complete genome3e-99371BLASTN svgBLASTP svg
CP002516:18464921846492187615129660Escherichia coli KO11, complete genome2e-94355BLASTN svgBLASTP svg
CP002185:22337322233732226508731356Escherichia coli W, complete genome2e-94355BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome8e-94353BLASTN svgBLASTP svg
NC_008253:21341102134110216406229953Escherichia coli 536, complete genome8e-94353BLASTN svgBLASTP svg
NC_009801:22761312276131230753131401Escherichia coli E24377A, complete genome8e-94353BLASTN svgBLASTP svg
NC_011748:23244952324495235493330439Escherichia coli 55989, complete genome2e-91345BLASTN svgBLASTP svg
CU928145:23244952324495235493330439Escherichia coli 55989 chromosome, complete genome2e-91345BLASTN svgBLASTP svg
AP010958:25040722504072253559331522Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-86329BLASTN svgBLASTP svg
NC_011080:21616962161696219837536680Salmonella enterica subsp. enterica serovar Newport str. SL254,4e-86327BLASTN svgBLASTP svg
NC_020260:11841741184174121484630673Cronobacter sakazakii Sp291, complete genome2e-79305BLASTN svgBLASTP svg
NC_009800:21560912156091218719031100Escherichia coli HS, complete genome6e-79303BLASTN svgBLASTP svg
NC_010067:80712980712983359926471Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete6e-79303BLASTN svgBLASTP svg
NC_013716:22551022255102228502629925Citrobacter rodentium ICC168, complete genome4e-77297BLASTN svgBLASTP svg
NC_015567:16604621660462170120640745Serratia sp. AS9 chromosome, complete genome2e-75291BLASTN svgBLASTP svg
NC_015566:16592881659288170119441907Serratia sp. AS12 chromosome, complete genome2e-75291BLASTN svgBLASTP svg
NC_011149:21108612110861214483233972Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-74287BLASTN svgBLASTP svg
NC_010102:86186086186089518233323Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,9e-72280BLASTN svgBLASTP svg
NC_006905:21753612175361220410628746Salmonella enterica subsp. enterica serovar Choleraesuis str9e-72280BLASTN svgBLASTP svg
NC_003198:21097752109775214492235148Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-69272BLASTN svgBLASTP svg
NC_004631:86200286200289659934598Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-69272BLASTN svgBLASTP svg
NC_006511:85478585478589509940315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-69272BLASTN svgBLASTP svg
NC_011083:22006132200613223455433942Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,5e-67264BLASTN svgBLASTP svg
NC_003197:21529942152994218696633973Salmonella typhimurium LT2, complete genome5e-67264BLASTN svgBLASTP svg
NC_020211:17045001704500175039445895Serratia marcescens WW4, complete genome1e-64256BLASTN svgBLASTP svg
NC_007946:22318722231872226061428743Escherichia coli UTI89, complete genome5e-58234BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-57232BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome5e-55224BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome5e-55224BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome5e-55224BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome7e-54220BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome7e-54220BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome7e-54220BLASTN svgBLASTP svg
NC_013850:16580101658010169680438795Klebsiella variicola At-22 chromosome, complete genome1e-49206BLASTN svgBLASTP svg
NC_020064:15475241547524158410636583Serratia marcescens FGI94, complete genome4e-49204BLASTN svgBLASTP svg
NC_020181:36050036050040550545006Enterobacter aerogenes EA1509E, complete genome1e-43186BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome4e-43184BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-41178BLASTN svgBLASTP svg
NC_010465:34653513465351350059935249Yersinia pseudotuberculosis YPIII, complete genome9e-35157BLASTN svgBLASTP svg
NC_010159:12880001288000132559537596Yersinia pestis Angola, complete genome9e-35157BLASTN svgBLASTP svg
NC_008150:28784502878450291443935990Yersinia pestis Antiqua, complete genome9e-35157BLASTN svgBLASTP svg
NC_008149:11226931122693115815435462Yersinia pestis Nepal516, complete genome9e-35157BLASTN svgBLASTP svg
NC_005810:87267287267291210839437Yersinia pestis biovar Microtus str. 91001, complete genome9e-35157BLASTN svgBLASTP svg
NC_004088:11968751196875123427537401Yersinia pestis KIM, complete genome9e-35157BLASTN svgBLASTP svg
NC_003143:34467403446740346555618817Yersinia pestis CO92, complete genome9e-35157BLASTN svgBLASTP svg
NC_011026:24503252450325248697436650Chloroherpeton thalassium ATCC 35110, complete genome1e-33153BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome2e-32149BLASTN svgBLASTP svg
NC_006155:11913071191307123066739361Yersinia pseudotuberculosis IP 32953, complete genome5e-30141BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-28135BLASTN svgBLASTP svg
NC_015424:16895001689500172544435945Aeromonas veronii B565 chromosome, complete genome1e-24123BLASTN svgBLASTP svg
NC_004547:16009001600900162975328854Erwinia carotovora subsp. atroseptica SCRI1043, complete genome5e-24121BLASTN svgBLASTP svg
NC_007912:26975812697581271653118951Saccharophagus degradans 2-40, complete genome3e-22115BLASTN svgBLASTP svg
NC_009792:36653693665369370602240654Citrobacter koseri ATCC BAA-895, complete genome5e-21111BLASTN svgBLASTP svg
NC_002505:23856923856927414635578Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete2e-20109BLASTN svgBLASTP svg
NC_012968:1108687*1108687113956830882Methylotenera mobilis JLW8, complete genome3e-19105BLASTN svgBLASTP svg
NC_014506:14824011482401150477822378Sulfurimonas autotrophica DSM 16294 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_005139:34350034350037669433195Vibrio vulnificus YJ016 chromosome I, complete sequence5e-18101BLASTN svgBLASTP svg
NC_008345:3394154*3394154341832224169Shewanella frigidimarina NCIMB 400, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_014733:107394*10739413952432131Methylovorus sp. MP688 chromosome, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_011138:10058721005872102609920228Alteromonas macleodii 'Deep ecotype', complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012982:18999731899973192773327761Hirschia baltica ATCC 49814, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013411:33454933454935568121133Geobacillus sp. Y412MC61, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014500:14916601491660151533923680Dickeya dadantii 3937 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014915:23876392387639241026922631Geobacillus sp. Y412MC52 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013421:2453078*2453078247692623849Pectobacterium wasabiae WPP163, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014655:27054822705482272826722786Leadbetterella byssophila DSM 17132 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_009092:15995261599526164486445339Shewanella loihica PV-4, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014500:4257145*4257145428370126557Dickeya dadantii 3937 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_007335:11590001159000117708118082Prochlorococcus marinus str. NATL2A, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_019904:52414445241444528632244879Echinicola vietnamensis DSM 17526 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015224:13910881391088142166930582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-0973.8BLASTN svgBLASTP svg
NC_014306:2703544*2703544272704423501Erwinia billingiae Eb661, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013406:2207520*2207520223225024731Paenibacillus sp. Y412MC10 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012214:15885731588573162042231850Erwinia pyrifoliae Ep1/96, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007514:90456590456594230337739Chlorobium chlorochromatii CaD3, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007498:10721121072112109809925988Pelobacter carbinolicus DSM 2380, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013222:72138472138474880827425Robiginitalea biformata HTCC2501, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014803:475355*47535549809922745Pseudoalteromonas sp. SM9913 chromosome chromosome I, complete4e-0971.9BLASTN svgBLASTP svg
NC_014839:253961*25396131222658266Pantoea sp. At-9b plasmid pPAT9B02, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_015061:3840463*3840463391463974177Rahnella sp. Y9602 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015224:27903727903730366824632Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,7e-0867.9BLASTN svgBLASTP svg
NC_014541:475350*47535053312757778Ferrimonas balearica DSM 9799 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_014012:16769831676983170572328741Shewanella violacea DSS12, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_004668:1010610*1010610103713326524Enterococcus faecalis V583, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011060:51487451487456528450411Pelodictyon phaeoclathratiforme BU-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015497:12878771287877133880050924Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006349:40080740080742001219206Burkholderia mallei ATCC 23344 chromosome 2, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_006351:2398403*2398403241919020788Burkholderia pseudomallei K96243 chromosome 2, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_007435:1077792*1077792110044222651Burkholderia pseudomallei 1710b chromosome II, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_007796:2387002*2387002242101934018Methanospirillum hungatei JF-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008835:18279051827905185016122257Burkholderia mallei NCTC 10229 chromosome I, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_009075:2428248*2428248244904320796Burkholderia pseudomallei 668 chromosome II, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_009078:2351046*2351046237054119496Burkholderia pseudomallei 1106a chromosome II, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_009079:40289140289142220419314Burkholderia mallei NCTC 10247 chromosome I, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_018697:2055725*2055725207885823134Cycloclasticus sp. P1 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004545:96422*9642212057224151Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome4e-0661.9BLASTN svgBLASTP svg