Pre_GI: BLASTN Hits

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Query: NC_015224:1641819 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 1641819, End: 1665099, Length: 23281

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014228:1336466*1336466135833321868Xenorhabdus nematophila ATCC 19061, complete genome3e-37165BLASTN svgBLASTP svg
NC_012751:275336*27533629828722952Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete2e-19105BLASTN svgBLASTP svg
NC_009778:17174581717458175914341686Enterobacter sakazakii ATCC BAA-894, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008322:37585003758500378050122002Shewanella sp. MR-7, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014840:20572320572326669960977Pantoea sp. At-9b plasmid pPAT9B03, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_013956:18100261810026182909919074Pantoea ananatis LMG 20103 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003116:1518110*1518110154147823369Neisseria meningitidis Z2491, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014306:3006028*3006028304213136104Erwinia billingiae Eb661, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002946:618439*61843964067022232Neisseria gonorrhoeae FA 1090, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020064:1409596*1409596145680247207Serratia marcescens FGI94, complete genome2e-0765.9BLASTN svgBLASTP svg