Pre_GI: BLASTP Hits

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Query: NC_015224:4473230:4476296 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 4476296, End: 4477015, Length: 720

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:3590323:368939936893993690229831Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-52205
NC_008258:3581583:360124036012403602070831Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-52205
NC_011601:3951324:397221639722163972926711Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-52205
NC_012214:3931824:395367239536723954388717Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein yiaF1e-59229
NC_006905:3780000:378549237854923786202711Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane lipoprotein2e-53209