Pre_GI: BLASTP Hits

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Query: NC_015224:3291736:3313379 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 3313379, End: 3313507, Length: 129

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3245000:3263297326329732645501254Escherichia coli ED1a chromosome, complete genomeIntegrase from prophage1e-0961.6
NC_010498:4072681:4081597408159740827601164Escherichia coli SMS-3-5, complete genomephage integrase family site specific recombinase6e-0959.7
NC_013361:4959323:4965243496524349664121170Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase6e-0959.3
NC_015224:4426167:4437677443767744388461170Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative phage integrase8e-0959.3
NC_012917:3198000:3204199320419932053891191Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein1e-0858.2
NC_010468:49074:5411954119552941176Escherichia coli ATCC 8739, complete genomeintegrase family protein5e-0856.6
NC_009832:110239:1164641164641176331170Serratia proteamaculans 568, complete genomeintegrase family protein5e-0856.6
NC_008150:4634695:4641845464184546430381194Yersinia pestis Antiqua, complete genomeputative phage integrase7e-0855.8
NC_017160:4508000:4519840451984045210331194Yersinia pestis D182038 chromosome, complete genomeputative phage integrase7e-0855.8
NC_014306:4901390:4945226494522649464011176Erwinia billingiae Eb661, complete genomePhage integrase1e-0755.1
NC_020211:996497:1003680100368010048461167Serratia marcescens WW4, complete genomeputative site specific integrase2e-0754.3
NC_013508:876431:8847268847268859491224Edwardsiella tarda EIB202, complete genomeputative site specific integrase2e-0754.3
NC_011083:2542876:2550781255078125520101230Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,integrase5e-0753.1
NC_015224:3291736:3302103330210333032661164Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Integrase7e-0752.8
NC_002655:301940:3107563107563119881233Escherichia coli O157:H7 EDL933, complete genomeintegrase protein for prophage CP-933I1e-0652
NC_011353:305820:3146363146363158681233Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesite-specific recombinase, phage integrase family1e-0652
NC_002695:301939:3108063108063119871182Escherichia coli O157:H7 str. Sakai, complete genomeputative integrase2e-0651.2