Pre_GI: BLASTP Hits

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Query: NC_015224:2618192:2622718 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 2622718, End: 2623128, Length: 411

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2448583:245311024531102453520411Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,global DNA-binding transcriptional dual regulator H-NS2e-46183
NC_015061:2867027:287810528781052878512408Rahnella sp. Y9602 chromosome, complete genomehistone family protein nucleoid-structuring protein H-NS1e-42171
NC_009832:2969376:298269729826972983104408Serratia proteamaculans 568, complete genomehistone family protein nucleoid-structuring protein H-NS4e-41166
NC_017168:3290380:331383833138383314248411Yersinia pestis A1122 chromosome, complete genomeglobal DNA-binding transcriptional dual regulator H-NS6e-41166
NC_014306:2703544:271566027156602716067408Erwinia billingiae Eb661, complete genomeHistone-like nucleoid-structuring protein (H-NS)8e-40162
NC_008149:1842500:185677118567711857178408Yersinia pestis Nepal516, complete genomeDNA-binding protein Hns1e-39161
NC_010465:2282874:230574723057472306154408Yersinia pseudotuberculosis YPIII, complete genomehistone family protein nucleoid-structuring protein H-NS1e-39161
NC_010634:2376245:239190323919032392310408Yersinia pseudotuberculosis PB1/+, complete genomehistone family protein nucleoid-structuring protein H-NS1e-39161
NC_010159:2252380:226955522695552269962408Yersinia pestis Angola, complete genomeDNA-binding protein H-NS1e-39161
NC_004088:2366000:237164123716412372048408Yersinia pestis KIM, complete genomeDNA-binding protein HLP-II (HU, BH2, HD, NS)1e-39161
NC_006155:2461262:247560124756012476008408Yersinia pseudotuberculosis IP 32953, complete genomeDNA-binding protein Hns1e-39161
NC_005810:2180303:219597521959752196382408Yersinia pestis biovar Microtus str. 91001, complete genomeglobal DNA-binding transcriptional dual regulator H-NS1e-39161
NC_009708:2245586:226842622684262268833408Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeglobal DNA-binding transcriptional dual regulator H-NS1e-39161
NC_017265:2087487:209333920933392093746408Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,global DNA-binding transcriptional dual regulator H-NS1e-39161
NC_009381:1064227:108635510863551086783429Yersinia pestis Pestoides F chromosome, complete genomeglobal DNA-binding transcriptional dual regulator H-NS9e-40161
NC_017160:2054289:209254120925412092939399Yersinia pestis D182038 chromosome, complete genomeDNA-binding protein Hns1e-39161
NC_017154:2430093:244506024450602445458399Yersinia pestis D106004 chromosome, complete genomeDNA-binding protein Hns1e-39161
NC_014029:2138000:216494921649492165347399Yersinia pestis Z176003 chromosome, complete genomeDNA-binding protein Hns1e-39161
NC_003143:2433190:244815724481572448555399Yersinia pestis CO92, complete genomeDNA-binding protein Hns1e-39161
NC_008150:1705152:172011917201191720517399Yersinia pestis Antiqua, complete genomeDNA-binding protein Hns1e-39161
NC_013421:2453078:247008424700842470491408Pectobacterium wasabiae WPP163, complete genomehistone family protein nucleoid-structuring protein H-NS6e-39159
NC_015968:2583721:259642225964222596835414Enterobacter asburiae LF7a chromosome, complete genomehistone family protein nucleoid-structuring protein H-NS1e-32138
NC_014121:1653385:165816616581661658579414Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeH-NS protein1e-32138
NC_016514:2647984:266089026608902661303414Enterobacter cloacae EcWSU1 chromosome, complete genomeDNA-binding protein H-NS1e-32138
NC_013850:2103469:210815321081532108560408Klebsiella variicola At-22 chromosome, complete genomehistone family protein nucleoid-structuring protein H-NS1e-32138
NC_009778:1477841:148417514841751484588414Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-32136
NC_020260:1535394:154307915430791543492414Cronobacter sakazakii Sp291, complete genomeglobal DNA-binding transcriptional dual regulator H-NS3e-32136
NC_008253:1938975:196648719664871966891405Escherichia coli 536, complete genomeputative DNA-binding protein5e-24109
NC_004431:2185750:221332922133292213733405Escherichia coli CFT073, complete genomeDNA-binding protein H-NS5e-24109
NC_013716:2139952:216115221611522161556405Citrobacter rodentium ICC168, complete genomeDNA-binding protein H-NS8e-24108
NC_003384:109036:131457131457131861405Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative DNA-binding protein1e-23108
NC_016825:158626:158626158626159030405Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12DNA-binding protein H-NS3e-23107
NC_011205:2180598:220938422093842209788405Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853H-NS histone family protein2e-23107
NC_011274:2044000:207349720734972073901405Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding protein2e-23107
NC_011294:2053991:208236920823692082773405Salmonella enterica subsp. enterica serovar Enteritidis strDNA-binding protein2e-23107
NC_016831:947281:960683960683961087405Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative DNA-binding protein (histone-like protein hlp-II)2e-23107
NC_004547:3207776:324113032411303241531402Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeDNA-binding protein Hns1e-22105
NC_013421:3093995:310667131066713107072402Pectobacterium wasabiae WPP163, complete genomehistone family protein nucleoid-structuring protein H-NS2e-22104
NC_004547:1873390:191476319147631915161399Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeDNA-binding protein Hns2e-22104
NC_014500:1862000:190280419028041903211408Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein H-NS3e-22103
NC_011745:2209288:226333422633342263738405Escherichia coli ED1a chromosome, complete genomeDNA-binding protein H-NS (Histone-like protein HLP-II)8e-22102
NC_014500:894136:904677904677905084408Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein H-NS3e-21100
NC_011601:2998326:302395430239543024358405Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA binding protein6e-1889.4
NC_011742:2863316:288528828852882885692405Escherichia coli S88 chromosome, complete genomeDNA binding protein7e-1889.4
NC_000913:2746886:279611327961132796517405Escherichia coli K12, complete genomeDNA binding protein, nucleoid-associated3e-1787.4
AP010958:3238742:326061632606163261020405Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA binding protein StpA, nucleoid-associated3e-1787.4
NC_010473:2839902:288787828878782888282405Escherichia coli str. K-12 substr. DH10B, complete genomeDNA binding protein, nucleoid-associated3e-1787.4
CP002185:2919752:294420629442062944610405Escherichia coli W, complete genomeDNA binding protein, nucleoid-associated3e-1787.4
CU928160:2818750:284300028430002843404405Escherichia coli IAI1 chromosome, complete genomeDNA binding protein, nucleoid-associated3e-1787.4
AC_000091:2747520:279674727967472797151405Escherichia coli W3110 DNA, complete genomeDNA binding protein, nucleoid-associated3e-1787.4
NC_011741:2818750:284300028430002843404405Escherichia coli IAI1 chromosome, complete genomeDNA binding protein, nucleoid-associated3e-1787.4
NC_012759:2633949:268192526819252682329405Escherichia coli BW2952 chromosome, complete genomeDNA binding protein3e-1787.4
NC_012967:2669182:269284426928442693248405Escherichia coli B str. REL606 chromosome, complete genomeDNA binding protein3e-1787.4
NC_013353:3238742:326061632606163261020405Escherichia coli O103:H2 str. 12009, complete genomeDNA binding protein StpA, nucleoid-associated3e-1787.4
NC_013364:3339768:336170533617053362109405Escherichia coli O111:H- str. 11128, complete genomeDNA binding protein StpA, nucleoid-associated3e-1787.4
NC_011750:2928990:296562729656272966031405Escherichia coli IAI39 chromosome, complete genomeDNA binding protein, nucleoid-associated3e-1787
NC_016612:477407:488100488100488564465Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative DNA-binding protein7e-1579.3
NC_008570:2216736:225203222520322252442411Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeDNA-binding protein Hns1e-1168.6
NC_009350:6987:164801648016890411Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completehistone-like nucleoid structuring protein3e-1063.9
NC_009350:137645:531531941411Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completehistone-like nucleoid structuring protein5e-1063.2
NC_015424:3112637:311882531188253119235411Aeromonas veronii B565 chromosome, complete genomehistone-like nucleoid structuring protein6e-1062.8
NC_010519:1411347:141313014131301413534405Haemophilus somnus 2336 chromosome, complete genomehistone family protein nucleoid-structuring protein H-NS1e-0858.5
NC_008309:842072:842970842970843374405Haemophilus somnus 129PT, complete genomeDNA-binding protein H-NS3e-0857.4
NC_007713:1:250925092943435Sodalis glossinidius str. 'morsitans' plasmid pSG1, completeDNA-binding protein8e-0752.4