Pre_GI: BLASTP Hits

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Query: NC_015224:1514747:1531720 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 1531720, End: 1533165, Length: 1446

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015186:2839668:2839668283966828412871620Acidiphilium multivorum AIU301, complete genomedeoxyribodipyrimidine photo-lyase9e-24112
NC_008782:1863853:1869256186925618707221467Acidovorax sp. JS42, complete genomeDeoxyribodipyrimidine photo-lyase9e-69261
NC_018643:857911:8799138799138813371425Alpha proteobacterium HIMB5 chromosome, complete genomeFAD-binding protein, DNA photolyase family,DNA photolyase3e-64246
NC_018644:137755:1403511403511417961446Alpha proteobacterium HIMB59 chromosome, complete genomeFAD-binding protein, DNA photolyase family,DNA photolyase2e-1790.9
NC_018644:516157:536362536362537096735Alpha proteobacterium HIMB59 chromosome, complete genomeFAD-binding protein, DNA photolyase family2e-1894
NC_018679:2412000:2430005243000524314351431Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completedeoxyribodipyrimidine photo-lyase1e-67257
NC_009485:5171658:5173487517348751749321446Bradyrhizobium sp. BTAi1 chromosome, complete genomedeoxyribodipyrimidine photo-lyase type I8e-65248
NC_017079:5034500:5058257505825750596331377Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein9e-1375.1
NC_007205:1232734:1253122125312212545431422Candidatus Pelagibacter ubique HTCC1062, complete genomeDeoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactivating enzyme)4e-61235
NC_013446:2237854:2258323225832322597441422Comamonas testosteroni CNB-2, complete genomeDNA photolyase, FAD-binding protein5e-32139
NC_003450:627500:6425536425536440011449Corynebacterium glutamicum ATCC 13032, complete genomedeoxyribodipyrimidine photolyase2e-52207
NC_006958:628035:6440146440146454621449Corynebacterium glutamicum ATCC 13032, complete genomeDEOXYRIBODIPYRIMIDINE PHOTOLYASE2e-52207
NC_012779:2755338:2773018277301827744331416Edwardsiella ictaluri 93-146, complete genomedeoxyribodipyrimidine photo-lyase2e-148526
NC_012947:3077922:3082785308278530842061422Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completedeoxyribodipyrimidine photolyase4e-161568
NC_010468:3209326:3214192321419232156101419Escherichia coli ATCC 8739, complete genomeDeoxyribodipyrimidine photo-lyase3e-161568
NC_012967:707083:7204007204007218211422Escherichia coli B str. REL606 chromosome, complete genomedeoxyribodipyrimidine photolyase4e-161568
CP002185:794732:8102778102778116951419Escherichia coli W, complete genomedeoxyribodipyrimidine photolyase, FAD-binding protein2e-161569
NC_009718:1470972:1490049149004914913591311Fervidobacterium nodosum Rt17-B1, complete genomedeoxyribodipyrimidine photo-lyase1e-50201
NC_017095:1627686:1632270163227016336101341Fervidobacterium pennivorans DSM 9078 chromosome, complete genomedeoxyribodipyrimidine photolyase5e-63242
NC_016001:1893685:1914423191442319157091287Flavobacterium branchiophilum, complete genomeDeoxyribodipyrimidine photolyase PhrB14e-61236
NC_013757:900500:9014229014229027861365Geodermatophilus obscurus DSM 43160, complete genomeDeoxyribodipyrimidine photo-lyase3e-67256
NC_010125:763141:7676137676137690041392Gluconacetobacter diazotrophicus PAl 5, complete genomeputative deoxyribodipyrimidine photo-lyase8e-67254
NC_006677:1052031:1073968107396810754071440Gluconobacter oxydans 621H, complete genomeDeoxyribodipyrimidine photolyase5e-59229
NC_015948:2367000:2368100236810023697041605Haloarcula hispanica ATCC 33960 chromosome chromosome I, completedeoxyribodipyrimidine photolyase3e-32139
NC_013967:2641433:2680567268056726820781512Haloferax volcanii DS2 chromosome, complete genomedeoxyribodipyrimidine photolyase1e-38160
NC_015557:765500:7810077810077823741368Hydrogenobaculum sp. 3684 chromosome, complete genomeDNA photolyase FAD-binding protein5e-0859.7
NC_020411:765500:7810347810347824011368Hydrogenobaculum sp. HO, complete genomeDNA photolyase FAD-binding protein5e-0859.7
NC_015587:765500:7810627810627824291368Hydrogenobaculum sp. SHO chromosome, complete genomeDNA photolyase FAD-binding protein5e-0859.7
NC_008576:1413778:1431359143135914327891431Magnetococcus sp. MC-1, complete genomeDeoxyribodipyrimidine photo-lyase6e-60232
NC_008347:1636660:1636660163666016381591500Maricaulis maris MCS10, complete genomeDeoxyribodipyrimidine photo-lyase2e-68260
NC_014752:2087998:2114050211405021153511302Neisseria lactamica ST-640, complete genomedeoxyribodopyrimidine photolyase1e-33144
NC_013960:243884:2613422613422627751434Nitrosococcus halophilus Nc4 chromosome, complete genomeDeoxyribodipyrimidine photo-lyase2e-65250
NC_020911:4428000:4449886444988644514211536Octadecabacter antarcticus 307, complete genomecytochrome/photolyase-like protein1e-25118
NC_020911:4428000:4436048443604844372651218Octadecabacter antarcticus 307, complete genomehypothetical protein2e-1067.4
NC_010003:1052997:1059259105925910606471389Petrotoga mobilis SJ95, complete genomeDeoxyribodipyrimidine photo-lyase2e-61236
NC_008027:896000:9163439163439177971455Pseudomonas entomophila L48, complete genomedeoxyribodipyrimidine photolyase (photoreactivation), FAD-binding4e-112405
NC_020209:47504:1247871247871262291443Pseudomonas poae RE*1-1-14, complete genomedeoxyribodipyrimidine photolyase4e-107389
NC_009428:807577:8293688293688307801413Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomedeoxyribodipyrimidine photo-lyase1e-44181
NC_017059:1727095:1727095172709517282041110Rhodospirillum photometricum DSM 122, complete genomeDeoxyribodipyrimidine photo-lyase type I1e-53211
NC_007940:97949:1207501207501221771428Rickettsia bellii RML369-C, complete genomeDeoxyribodipyrimidine photo-lyase5e-64245
NC_011147:2085241:2109527210952721109481422Salmonella enterica subsp. enterica serovar Paratyphi A strdeoxyribodipyrimidine photolyase9e-160563
NC_006511:2090058:2114344211434421157651422Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCdeoxyribodipyrimidine photolyase9e-160563
NC_010102:2322866:2347834234783423493361503Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-161567
NC_016832:2201860:2226120222612022275411422Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Deoxyribodipyrimidine photo-lyase6e-160564
NC_004631:2205821:2229355222935522307761422Salmonella enterica subsp. enterica serovar Typhi Ty2, completedeoxyribodipyrimidine photolyase6e-160564
NC_016940:3632974:3632974363297436343111338Saprospira grandis str. Lewin chromosome, complete genomedeoxyribodipyrimidine photo-lyase5e-58225
NC_012588:211633:2264832264832277841302Sulfolobus islandicus M.14.25 chromosome, complete genomedeoxyribodipyrimidine photo-lyase2e-45184
NC_010730:741842:7476487476487490151368Sulfurihydrogenibium sp. YO3AOP1, complete genomeDeoxyribodipyrimidine photo-lyase9e-0858.9
NC_008319:262894:263822263822264769948Synechococcus sp. CC9311, complete genomeblue light photoreceptor cryptochrome2e-1377.4
NC_007516:193498:2206182206182220511434Synechococcus sp. CC9605, complete genomeDeoxyribodipyrimidine photolyase3e-68259
NC_010475:2896000:2918298291829829197311434Synechococcus sp. PCC 7002, complete genomedeoxyribopyrimidine photolyase2e-74280
NC_017270:1755552:1790924179092417923121389Vibrio cholerae LMA3984-4 chromosome chromosome I, completeDeoxyribodipyrimidine photolyase, single-strand- specific1e-27125
NC_012668:1688500:1691333169133316927181386Vibrio cholerae MJ-1236 chromosome 1, complete sequencedeoxyribodipyrimidine photolyase single-strand-specific1e-26121
NC_017262:1913302:1925116192511619265191404Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completedeoxyribodipyrimidine photo-lyase1e-62241