Pre_GI: BLASTP Hits

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Query: NC_015214:48999:50037 Lactobacillus acidophilus 30SC chromosome, complete genome

Start: 50037, End: 50462, Length: 426

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010080:69000:703367033671160825Lactobacillus helveticus DPC 4571, complete genome7e-63238
NC_004741:1792442:1809541180954118110761536Shigella flexneri 2a str. 2457T, complete genomeacid sensitivity protein, putative transporter4e-1786.7
NC_007613:1533024:1556412155641215579471536Shigella boydii Sb227, complete genomeacid sensitivity protein, putative transporter4e-1786.7
NC_008258:1750964:1771126177112617726611536Shigella flexneri 5 str. 8401, complete genomeacid sensitivity protein, putative transporter4e-1786.7
NC_004431:1754627:1754627175462717561621536Escherichia coli CFT073, complete genomeAmino acid antiporter4e-1786.7
NC_009699:2654672:2656302265630226577471446Clostridium botulinum F str. Langeland chromosome, complete genomeamino acid permease9e-0752.4
NC_009697:2478261:2479892247989224813371446Clostridium botulinum A str. ATCC 19397 chromosome, completeamino acid permease1e-0651.6
NC_009698:2450606:2452237245223724536821446Clostridium botulinum A str. Hall chromosome, complete genomeamino acid permease1e-0651.6
NC_014618:2423661:2444986244498624464371452Enterobacter cloacae SCF1 chromosome, complete genomeamino acid permease3e-1270.5
NC_009495:2606238:2607869260786926093141446Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeamino acid permease1e-0651.6
NC_010516:2594159:2595779259577925972241446Clostridium botulinum B1 str. Okra, complete genomeamino acid permease family protein8e-0752.4
NC_017297:2635892:2656451265645126578961446Clostridium botulinum F str. 230613 chromosome, complete genomeamino acid permease family protein9e-0752.4
NC_010520:2668702:2670322267032226717671446Clostridium botulinum A3 str. Loch Maree, complete genomeamino acid permease family protein8e-0752.4
NC_012563:2761570:2782140278214027835851446Clostridium botulinum A2 str. Kyoto, complete genomeamino acid permease family protein1e-0652
NC_012658:2641446:2663215266321526646601446Clostridium botulinum Ba4 str. 657 chromosome, complete genomeamino acid permease family protein9e-0752.4
NC_009380:4944183:4952656495265649541431488Salinispora tropica CNB-440 chromosome, complete genomeamino acid permease-associated protein2e-1064.7
NC_014507:2568933:2568933256893325703721440Methanoplanus petrolearius DSM 11571 chromosome, complete genomeamino acid permease-associated protein4e-0856.6
NC_014507:2319842:2333086233308623345161431Methanoplanus petrolearius DSM 11571 chromosome, complete genomeamino acid permease-associated protein8e-0752.4
NC_008497:79144:7992879928814331506Lactobacillus brevis ATCC 367, complete genomeGlutamate gamma-aminobutyrate antiporter4e-25113
NC_016822:1781644:1801998180199818035331536Shigella sonnei 53G, complete genomeglutamate/g-aminobutyrate antiporter4e-1786.7
NC_009614:4802000:4809599480959948111761578Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglutamate/gamma-aminobutyrate anti-porter1e-0858.9
NC_014106:54587:5458754587560291443Lactobacillus crispatus ST1, complete genomeGlutamate/gamma-aminobutyrate antiporter2e-62236
NC_013941:1894496:1894496189449618960311536Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeglutamate/gamma-aminobutyrate antiporter4e-1786.7
NC_011353:2004800:2004800200480020063351536Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeglutamate:gamma aminobutyrate antiporter4e-1787
NC_010658:1593137:1593137159313715946721536Shigella boydii CDC 3083-94, complete genomeglutamate:gamma aminobutyrate antiporter4e-1786.7
NC_009801:1678790:1678790167879016803251536Escherichia coli E24377A, complete genomeglutamate:gamma aminobutyrate antiporter4e-1786.7
NC_011740:1595381:1615255161525516167901536Escherichia fergusonii ATCC 35469, complete genomeglutamate:gamma-aminobutyric acid antiporter4e-1786.7
NC_013353:1711656:1711656171165617131911536Escherichia coli O103:H2 str. 12009, complete genomeglutamate:gamma-aminobutyric acid antiporter GadC4e-1786.7
NC_013361:2047170:2047170204717020487051536Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglutamate:gamma-aminobutyric acid antiporter GadC4e-1786.7
NC_006814:51500:5256852568540251458Lactobacillus acidophilus NCFM, complete genomeglutamategamma-aminobutyrate antiporter4e-62236
NC_005362:52848:6874268742703371596Lactobacillus johnsonii NCC 533, complete genomehypothetical protein1e-45181
AP010958:1711656:1711656171165617131911536Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted glutamate:gamma-aminobutyric acid antiporter GadC4e-1786.7
NC_008258:2542863:2552467255246725539271461Shigella flexneri 5 str. 8401, complete genomeputative amino acid antiporter2e-1581.3
NC_004337:2548288:2557990255799025594501461Shigella flexneri 2a str. 301, complete genomeputative amino acid antiporter2e-1581.3
NC_017328:2586171:2595628259562825970881461Shigella flexneri 2002017 chromosome, complete genomeputative amino acid antiporter2e-1581.3
NC_004741:2526421:2536123253612325375831461Shigella flexneri 2a str. 2457T, complete genomeputative amino acid antiporter2e-1581.3
NC_015224:3892972:3907937390793739094931557Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative amino acid permease3e-0857
NC_008800:4013298:4030666403066640322221557Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative amino acid permease3e-0857
NC_013364:1902761:1902761190276119042961536Escherichia coli O111:H- str. 11128, complete genomeputative glutamate:gamma-aminobutyric acid antiporter GadC4e-1786.7