Pre_GI: BLASTP Hits

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Query: NC_015067:1145101:1157850 Bifidobacterium longum subsp. longum JCM 1217, complete genome

Start: 1157850, End: 1158884, Length: 1035

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008541:4679022:1965196530891125Arthrobacter sp. FB24 chromosome 1, complete sequenceDNA polymerase III, beta subunit3e-1686.3
NC_008711:4579997:1995199531191125Arthrobacter aurescens TC1, complete genomeDNA polymerase III, beta subunit6e-1685.1
NC_011886:4376261:2127212732511125Arthrobacter chlorophenolicus A6, complete genomeDNA polymerase III, beta subunit1e-1584.3
NC_015145:4232283:2347234734711125Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeDNA polymerase III subunit beta1e-1584.3
NC_014550:3839389:2256225633831128Arthrobacter arilaitensis Re117, complete genomeDNA polymerase III subunit beta1e-1377.8
NC_014151:4106624:2426242635561131Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA polymerase III, beta subunit4e-1375.9
NC_013521:4240468:2337233734671131Sanguibacter keddieii DSM 10542, complete genomeDNA polymerase III, beta subunit6e-1272
NC_003888:4251867:4268713426871342698431131Streptomyces coelicolor A3(2), complete genomeDNA polymerase III subunit beta2e-1170.5
NC_015067:2371428:2239223933631125Bifidobacterium longum subsp. longum JCM 1217, complete genomeDNA polymerase III beta subunit2e-1067
NC_004307:1620500:1622403162240316235271125Bifidobacterium longum NCC2705, complete genomeDNA polymerase III subunit beta2e-1067
NC_015052:2383865:2239223933631125Bifidobacterium longum subsp. infantis 157F, complete genomeDNA polymerase III subunit beta2e-1067
NC_010816:1660066:1664070166407016651941125Bifidobacterium longum DJO10A, complete genomeDNA polymerase sliding clamp subunit2e-1067
NC_014656:1634397:1638401163840116395251125Bifidobacterium longum subsp. longum BBMN68 chromosome, completednan2e-1067
NC_017221:2268276:2270009227000922711331125Bifidobacterium longum subsp. longum KACC 91563 chromosome,DNA polymerase III subunit beta2e-1067
NC_014830:4012999:2567256736941128Intrasporangium calvum DSM 43043 chromosome, complete genomeDNA polymerase III, beta subunit4e-1065.9
NC_013595:10329633:2672267238111140Streptosporangium roseum DSM 43021, complete genomeDNA-directed DNA polymerase1e-0964.3
NC_014210:5752651:3397339745361140Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, beta subunit4e-0962.4
NC_014211:439611:4582334582334593871155Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidDNA polymerase III, beta subunit5e-0962.4
NC_018750:3964784:3969808396980839709381131Streptomyces venezuelae ATCC 10712, complete genomeDNA polymerase III beta subunit1e-0860.8
NC_013929:5135285:5137597513759751387271131Streptomyces scabiei 87.22 chromosome, complete genomeDNA polymerase III subunit beta3e-0859.7
NC_015953:3684065:3689253368925336903831131Streptomyces sp. SirexAA-E chromosome, complete genomeDNA polymerase III subunit beta7e-0858.5
NC_015125:1597600:1601432160143216025891158Microbacterium testaceum StLB037, complete genomeDNA polymerase sliding clamp subunit8e-0858.2
NC_007333:3626510:2824282439421119Thermobifida fusca YX, complete genomeDNA polymerase III subunit beta8e-0858.2
NC_007333:1:2824282439421119Thermobifida fusca YX, complete genomeDNA polymerase III subunit beta8e-0858.2
NC_013510:1:2867286739941128Thermomonospora curvata DSM 43183, complete genomeDNA polymerase III, beta subunit2e-0757
NC_013093:1:2628262837641137Actinosynnema mirum DSM 43827, complete genomeDNA polymerase III, beta subunit1e-0654.3
NC_015312:1:2771277139011131Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA polymerase III subunit beta3e-0653.1