Pre_GI: BLASTP Hits

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Query: NC_014933:2240000:2240134 Bacteroides helcogenes P 36-108 chromosome, complete genome

Start: 2240134, End: 2240682, Length: 549

Host Lineage: Bacteroides helcogenes; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: Environment: Host; Isolation: Pig faeces; Temp: Mesophile. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. This organism produces many extracellular enzymes which assist in the breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides. This species has been isolated from abscesses in pigs.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020054:1335699:135291713529171353507591Fibrella aestuarina BUZ 2 drat genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-34145
NC_013730:6901725:691767169176716918270600Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-31135
NC_015846:790374:805927805927806496570Capnocytophaga canimorsus Cc5 chromosome, complete genomesigma-W factor1e-22105
NC_014655:424486:427004427004427549546Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily3e-1994.7
NC_013037:2231006:224359722435972244193597Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1787.8
NC_016609:2224212:223966622396662240211546Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1479.3
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1479.3
NC_015496:2279829:228225522822552282800546Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1478.6
NC_015846:369500:389672389672390220549Capnocytophaga canimorsus Cc5 chromosome, complete genomesigma-W factor2e-1375.5
NC_016627:689406:701226701226701768543Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-1375.1
NC_015064:2341152:236514523651452365786642Acidobacterium sp. MP5ACTX9 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1270.1
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor5e-1167.4
NC_011725:1032500:104531410453141045847534Bacillus cereus B4264 chromosome, complete genomeRNA polymerase factor sigma C2e-1065.1
NC_012912:1200000:122636512263651226940576Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1064.3
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU4e-1064.3
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)5e-1063.9
NC_008554:1623041:164580616458061646414609Syntrophobacter fumaroxidans MPOB, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-1063.5
NC_016627:4323370:436892043689204369462543Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor8e-1063.2
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor1e-0962.8
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor1e-0962.4
NC_009012:2953638:301233430123343012897564Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.4
NC_012880:3241886:326005132600513260626576Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.4
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor2e-0962.4
NC_009142:267550:269255269255269797543Saccharopolyspora erythraea NRRL 2338, complete genomeRNA polymerase sigma-70 factor, ECF family2e-0962
NC_008536:3160540:318629731862973186758462Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962
NC_014393:4541000:454485545448554545400546Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962
NC_014171:1018338:103091910309191031539621Bacillus thuringiensis BMB171 chromosome, complete genomeRNA polymerase ECF-type sigma factor2e-0962
NC_020126:5152359:515339351533935153953561Myxococcus stipitatus DSM 14675, complete genomeECF family RNA polymerase sigma factor5e-0960.8
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor5e-0960.8
NC_016610:2489415:249031924903192490903585Tannerella forsythia ATCC 43037 chromosome, complete genomeRNA polymerase sigma-70 factor6e-0960.5
NC_015589:2019370:202926920292692029814546Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor6e-0960.5
NC_017208:1050414:106404110640411064574534Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase ECF-type sigma factor6e-0960.5
NC_021184:1024305:103925110392511039850600Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0859.7
NC_014210:5752651:575645957564595757085627Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,RNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.7
NC_014833:3268102:327741332774133277916504Ruminococcus albus 7 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0859.3
NC_021184:3149000:315104331510433151618576Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0859.3
NC_017030:9818064:981751098175109818067558Corallococcus coralloides DSM 2259 chromosome, complete genomeECF subfamily RNA polymerase sigma factor1e-0859.3
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0859.3
NC_017200:1157835:117323311732331173853621Bacillus thuringiensis serovar finitimus YBT-020 chromosome,RNA polymerase factor sigma C1e-0859.3
NC_010320:671699:672453672453672983531Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase sigma factor SigY2e-0858.9
NC_011969:1084000:109474110947411095211471Bacillus cereus Q1 chromosome, complete genomeRNA polymerase factor sigma c2e-0858.9
NC_016048:987699:100993810099381010423486Oscillibacter valericigenes Sjm18-20, complete genomeRNA polymerase ECF subfamily sigma factor2e-0858.9
NC_010184:1017000:102909510290951029628534Bacillus weihenstephanensis KBAB4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_017986:5467279:548737254873725487980609Pseudomonas putida ND6 chromosome, complete genomeRNA polymerase sigma factor2e-0858.5
NC_021184:3174500:320020332002033200760558Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0858.5
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE2e-0858.5
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_016048:2907702:297798929779892978513525Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase ECF subfamily sigma factor3e-0858.2
NC_006274:1040836:105320610532061053739534Bacillus cereus E33L, complete genomeRNA polymerase sigma C factor3e-0858.2
NC_016609:5890292:591106159110615911663603Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0857.8
NC_013165:1294000:129584012958401296331492Slackia heliotrinireducens DSM 20476, complete genomeRNA polymerase sigma factor, sigma-70 family4e-0857.8
NC_015966:1145974:116775911677591168322564Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0857.8
NC_016627:4270949:428432542843254284810486Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor4e-0857.4
NC_012483:3000619:301439730143973015074678Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor5e-0857.4
NC_013730:4399643:441409444140944414645552Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0857.4
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor7e-0857
NC_016620:24354:450414504145571531Bacteriovorax marinus SJ, complete genomeputative RNA polymerase ECF-type sigma factor7e-0857
NC_014829:178000:186205186205186768564Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0857
NC_015703:5272193:529904352990435299582540Runella slithyformis DSM 19594 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit6e-0857
NC_014033:1664500:168220716822071682704498Prevotella ruminicola 23 chromosome, complete genomeECF family RNA polymerase sigma-70 factor6e-0857
NC_004557:558500:573257573257573847591Clostridium tetani E88, complete genomeRNA polymerase sigma-70 factor9e-0856.6
NC_012659:1008028:102019010201901020723534Bacillus anthracis str. A0248, complete genomeRNA polymerase factor sigma C1e-0756.6
NC_003997:1007139:102029010202901020823534Bacillus anthracis str. Ames, complete genomeRNA polymerase sigma C factor1e-0756.6
NC_007530:1007140:102029010202901020823534Bacillus anthracis str. 'Ames Ancestor', complete genomeRNA polymerase sigma C factor1e-0756.6
NC_011992:1318691:131869113186911319206516Acidovorax ebreus TPSY, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.2
NC_002936:149100:163656163656164207552Dehalococcoides ethenogenes 195, complete genomeRNA polymerase sigma factor SigW, putative1e-0756.2
NC_010170:3908500:391055939105593911074516Bordetella petrii, complete genomeRNA polymerase sigma factor1e-0756.2
NC_008600:1042477:105546210554621055995534Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0756.2
NC_005957:1037205:104952510495251050058534Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma C factor1e-0756.2
NC_016779:991298:100202010020201002553534Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor1e-0756.2
NC_011898:426951:428407428407428976570Clostridium cellulolyticum H10, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0755.8
NC_018665:139646:154042154042154605564Exiguobacterium antarcticum B7 chromosome, complete genomeRNA polymerase sigma factor SigW1e-0755.8
NC_005945:1008000:102009610200961020716621Bacillus anthracis str. Sterne, complete genomeRNA polymerase sigma C factor2e-0755.8
NC_015160:2239933:226227222622722262844573Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.8
NC_009454:1577319:163526116352611635848588Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit2e-0755.5
NC_011772:1011220:102153510215351022068534Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-0755.5
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor2e-0755.5
NC_009615:2709040:272511227251122725837726Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor2e-0755.1
NC_014328:3294086:329497232949723295487516Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma-E factor3e-0755.1
NC_004193:3215500:321633632163363216875540Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase ECF-type sigma factor3e-0755.1
NC_015172:850802:875550875550876032483Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.7
NC_012214:1117325:114286111428611143436576Erwinia pyrifoliae Ep1/96, complete genomeRNA polymerase sigma E3e-0754.7
NC_014220:837926:841866841866842591726Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily3e-0754.7
NC_007333:3626510:363293636329363633556621Thermobifida fusca YX, complete genomeRNA polymerase sigma-70 factor3e-0754.7
NC_009523:379705:396061396061396654594Roseiflexus sp. RS-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor4e-0754.3
NC_016830:2168523:218617921861792186661483Pseudomonas fluorescens F113 chromosome, complete genomeprotein FpvI4e-0754.3
NC_011773:1050000:106249510624951063028534Bacillus cereus AH820 chromosome, complete genomeRNA polymerase factor sigma C4e-0754.3
NC_011961:304158:307073307073307639567Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily4e-0754.3
NC_011894:2747491:276819727681972768877681Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0754.3
NC_008686:1592073:161056416105641611091528Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily6e-0753.9
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW5e-0753.9
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W5e-0753.9
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W5e-0753.9
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW5e-0753.9
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor5e-0753.9
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW5e-0753.9
NC_015953:4908069:492497149249714925813843Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-0753.9
NC_010556:141374:154091154091154654564Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0753.5
NC_007760:645016:645016645016645522507Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma-24 (FecI-like)8e-0753.5
NC_021182:3409199:341352734135273414072546Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0653.1
NC_014318:3947845:396962239696223970236615Amycolatopsis mediterranei U32 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0653.1
NC_017186:3947874:396965139696513970265615Amycolatopsis mediterranei S699 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor1e-0653.1
NC_010552:58294:958139581396517705Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0653.1
NC_012491:5914500:591721659172165917788573Brevibacillus brevis NBRC 100599, complete genomeRNA polymerase ECF-type sigma factor1e-0652.8
NC_014148:3368519:337293333729333373580648Planctomyces limnophilus DSM 3776 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0652.4
NC_013730:2490000:249877424987742499262489Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.4
NC_015144:1576047:158985115898511590342492Weeksella virosa DSM 16922 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.4
NC_013166:1149760:116568711656871166253567Kangiella koreensis DSM 16069, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.4
NC_015311:720631:726166726166726678513Prevotella denticola F0289 chromosome, complete genomeSigma-70 region 21e-0652.4
NC_015160:1734454:175079817507981751364567Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_013446:2237854:225325022532502253825576Comamonas testosteroni CNB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_014098:2225174:224373822437382244325588Bacillus tusciae DSM 2912 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_019978:2036779:205421120542112054906696Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma-K factor2e-0652
NC_016114:3655005:367332236733223674023702Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.6
NC_015277:5211779:522919252291925229782591Sphingobacterium sp. 21 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_008391:2045348:206876820687682069472705Burkholderia cepacia AMMD chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_015172:1075592:107559210755921076101510Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0651.2
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily4e-0651.2
NC_018750:3481476:348147634814763482261786Streptomyces venezuelae ATCC 10712, complete genomeputative RNA polymerase ECF-subfamily sigma factor4e-0651.2
NC_016109:5290000:529044352904435291108666Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor3e-0651.2
NC_004663:4373902:437668943766894377198510Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor4e-0650.8
NC_020126:10117469:101278211012782110128642822Myxococcus stipitatus DSM 14675, complete genomeECF family RNA polymerase sigma factor5e-0650.8
NC_015953:3684065:370288037028803703584705Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-0650.8
NC_012673:1540000:154720815472081547783576Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0650.8
NC_011830:3369282:338259733825973383103507Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0650.4
NC_010337:2848360:286534728653472865868522Heliobacterium modesticaldum Ice1, complete genomeRNA polymerase sigma-70, region 45e-0650.4
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit7e-0650.1
NC_016627:762000:776639776639777193555Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor8e-0650.1
NC_009342:951761:964659964659965279621Corynebacterium glutamicum R chromosome, complete genomeRNA polymerase sigma factor RpoE8e-0650.1
NC_003450:788000:804408804408805028621Corynebacterium glutamicum ATCC 13032, complete genomeRNA polymerase sigma factor RpoE8e-0650.1
NC_016776:3485688:348838334883833488895513Bacteroides fragilis 638R, complete genomeputative RNA polymerase sigma factor9e-0650.1
NC_003228:3455405:345667234566723457184513Bacteroides fragilis NCTC 9343, complete genomeputative RNA polymerase sigma factor9e-0650.1
NC_017955:3731480:383478738347873835308522Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit9e-0649.7