Pre_GI: BLASTP Hits

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Query: NC_014824:133065:146480 Ruminococcus albus 7 plasmid pRUMAL01, complete sequence

Start: 146480, End: 147916, Length: 1437

Host Lineage: Ruminococcus albus; Ruminococcus; Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Host; Temp: Mesophile; Temp: 40C. Ruminococcus albus 7 is a common rumen bacterium. This organism is able to degrade cellulose and also produces an antimicrobial compound that prevents the growth of Ruminococcus flavefaciens. The bacterium requires phenylacetic and phenylpropionic acids for maximal growth. The organism produces cellulosomes at the cell surface that are multimeric protein complexes that contain scaffolding proteins and degradative enzymes. Understanding the metabolism of plant polysaccharides may enable scientists to improve the productivity of ruminant organisms such as cattle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015958:1983815:2002191200219120037321542Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase large subunit domain-containing protein2e-122439
NC_010520:3580000:3589336358933635908291494Clostridium botulinum A3 str. Loch Maree, complete genome[Fe] hydrogenase1e-100367
NC_009495:3502000:3512133351213335136291497Clostridium botulinum A str. ATCC 3502 chromosome, complete genome[Fe] hydrogenase6e-100365
NC_009697:3463736:3488121348812134896141494Clostridium botulinum A str. ATCC 19397 chromosome, complete[Fe] hydrogenase5e-100365
NC_009699:3581376:3605767360576736072601494Clostridium botulinum F str. Langeland chromosome, complete genome[Fe] hydrogenase3e-100365
NC_017297:3594000:3604382360438236058751494Clostridium botulinum F str. 230613 chromosome, complete genome[Fe] hydrogenase3e-100365
NC_015425:2389400:2403109240310924045931485Clostridium botulinum BKT015925 chromosome, complete genomeFe-hydrogenase large subunit family protein8e-98357
NC_012563:3729817:3754207375420737557001494Clostridium botulinum A2 str. Kyoto, complete genome[Fe] hydrogenase2e-97356
NC_008593:2136759:2146548214654821480321485Clostridium novyi NT, complete genomeFe-hydrogenase large subunit family protein4e-97355
NC_020291:491000:5095775095775110641488Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeferredoxin hydrogenase2e-93343
NC_010001:109893:1200331200331214871455Clostridium phytofermentans ISDg, complete genomeFerredoxin hydrogenase4e-93342
NC_004557:2552418:2556219255621925577031485Clostridium tetani E88, complete genomeperiplasmic [Fe] hydrogenase 18e-93341
NC_009617:385000:3941173941173956071491Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeferredoxin hydrogenase1e-91337
NC_010723:371741:3830613830613845451485Clostridium botulinum E3 str. Alaska E43, complete genomeiron-dependent hydrogenase3e-86319
NC_010674:370629:3876673876673891511485Clostridium botulinum B str. Eklund 17B, complete genomeiron-dependent hydrogenase2e-85316
NC_014364:3500041:3519450351945035209641515Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehydrogenase large subunit domain protein3e-85315
NC_013203:472679:4744474744474760421596Atopobium parvulum DSM 20469, complete genomeFerredoxin hydrogenase7e-82305
NC_015389:1298689:1320798132079813223511554Coriobacterium glomerans PW2 chromosome, complete genomehydrogenase large subunit domain protein4e-79295
NC_010424:448865:4541674541674556241458Candidatus Desulforudis audaxviator MP104C, complete genomehydrogenase large subunit domain protein7e-77288
NC_010644:485966:5097615097615111971437Elusimicrobium minutum Pei191, complete genomehydrogenase large subunit2e-68259
NC_006138:2683545:2717282271728227187331452Desulfotalea psychrophila LSv54, complete genomesimilar to hydrogenase2e-66253
NC_010516:3845942:3867259386725938686081350Clostridium botulinum B1 str. Okra, complete genome[Fe] hydrogenase3e-52206
NC_009698:3647955:3669220366922036705691350Clostridium botulinum A str. Hall chromosome, complete genome[Fe] hydrogenase3e-52206
NC_014328:2203437:2203437220343722047831347Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Iron only hydrogenase large subunit8e-52204
NC_007907:960104:9669189669189681951278Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-46187
NC_020134:2832857:2836197283619728375851389Clostridium stercorarium subsp. stercorarium DSM 8532, completehydrogenase large subunit domain protein2e-42173
NC_008261:304000:3265183265183278671350Clostridium perfringens ATCC 13124, complete genome[Fe] hydrogenase2e-40167
NC_008262:297960:3212573212573226061350Clostridium perfringens SM101, complete genomeHydrogenase subunit (ferredoxin)3e-40166
NC_007503:1383255:1383255138325513854532199Carboxydothermus hydrogenoformans Z-2901, complete genomesigma-54 dependent transcriptional regulator5e-29129
NC_010321:244371:2530382530382547711734Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehydrogenase2e-27124
NC_010320:671699:6831316831316848731743Thermoanaerobacter sp. X514 chromosome, complete genomeputative PAS/PAC sensor protein2e-27124
NC_019978:7535:2927929279309671689Halobacteroides halobius DSM 5150, complete genomeiron only hydrogenase large subunit1e-27124
NC_015949:2327500:2327610232761023294811872Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomemethyl-accepting chemotaxis sensory transducer3e-27123
NC_008261:2920999:2926027292602729277451719Clostridium perfringens ATCC 13124, complete genomeiron hydrogenase1e-26121
NC_014824:133065:1436251436251453011677Ruminococcus albus 7 plasmid pRUMAL01, complete sequenceputative PAS/PAC sensor protein1e-26121
NC_015958:1983815:1989439198943919911661728Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeputative PAS/PAC sensor protein2e-25117
NC_013385:1758383:1778719177871917804701752Ammonifex degensii KC4, complete genomehydrogenase, Fe-only3e-25116
NC_012778:207415:2259602259602276421683Eubacterium eligens ATCC 27750, complete genomeNADH dehydrogenase I chain G2e-24114
NC_015578:1038588:1043196104319610449471752Treponema primitia ZAS-2 chromosome, complete genomeferredoxin 23e-24113
NC_016012:879972:8821658821658839011737Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeiron hydrogenase8e-24112
NC_010001:109893:1227551227551244881734Clostridium phytofermentans ISDg, complete genomeputative PAS/PAC sensor protein1e-23111
NC_015589:2555000:2555101255510125568131713Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePAS fold domain-containing protein5e-23109
NC_010001:109893:1154371154371171401704Clostridium phytofermentans ISDg, complete genomehydrogenase, Fe-only2e-22107
NC_014377:532816:5487185487185504181701Thermosediminibacter oceani DSM 16646 chromosome, complete genomeNAD(P)-dependent iron-only hydrogenase catalytic subunit4e-22106
NC_015519:2605709:2613464261346426154431980Tepidanaerobacter sp. Re1 chromosome, complete genomehydrogenase, Fe-only7e-22105
NC_011830:2177187:2194046219404621974983453Desulfitobacterium hafniense DCB-2, complete genomehydrogenase, Fe-only7e-22105
NC_013740:2141523:2158428215842821601581731Acidaminococcus fermentans DSM 20731, complete genomehydrogenase, Fe-only3e-21103
NC_013385:1758383:1776695177669517784311737Ammonifex degensii KC4, complete genomehydrogenase, Fe-only9e-21102
NC_009706:830461:8417448417448431171374Clostridium kluyveri DSM 555 chromosome, complete genomeFe-Fe hydrogenase 26e-21102
NC_020291:2701149:2703814270381427051871374Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome[FeFe] hydrogenase, group A5e-21102
NC_011837:830436:8416928416928430921401Clostridium kluyveri NBRC 12016, complete genomehypothetical protein5e-21102
NC_016584:3826300:3826300382630038291252826Desulfosporosinus orientis DSM 765 chromosome, complete genomesignal transduction histidine kinase1e-20101
NC_016048:1602500:1603093160309316047871695Oscillibacter valericigenes Sjm18-20, complete genomeputative uptake hydrogenase subunit HupA1e-20101
NC_019978:2260395:2284480228448022862071728Halobacteroides halobius DSM 5150, complete genomehydrogenase, Fe-only1e-20101
NC_015425:2072703:2098141209814121000301890Clostridium botulinum BKT015925 chromosome, complete genometranscriptional regulator6e-2099.4
NC_014328:2203437:2216007221600722179231917Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator6e-2099
NC_007519:64157:7582175821770861266Desulfovibrio alaskensis G20 chromosome, complete genomeferredoxin hydrogenase6e-2099
NC_016627:1485799:1512139151213915134731335Clostridium clariflavum DSM 19732 chromosome, complete genomeiron only hydrogenase large subunit6e-2099
NC_014328:773095:7859367859367873241389Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeFe-Fe hydrogenase 22e-1997.4
NC_013315:3689422:3708153370815337095291377Clostridium difficile CD196 chromosome, complete genomehydrogenase6e-1995.9
NC_010334:1701957:1701957170195717031891233Shewanella halifaxensis HAW-EB4, complete genomehydrogenase, Fe-only7e-1995.9
NC_016627:1485799:1518304151830415200791776Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase, Fe-only1e-1791.7
NC_004663:107019:1132011132011149671767Bacteroides thetaiotaomicron VPI-5482, complete genomeNADH:ubiquinone oxidoreductase subunit4e-1583.2
NC_015577:3735558:3735558373555837376452088Treponema azotonutricium ZAS-9 chromosome, complete genome4Fe-4S binding domain-containing protein1e-1275.1
NC_010718:517473:526905526905527711807Natranaerobius thermophilus JW/NM-WN-LF, complete genomeelectron transport complex, RnfABCDGE type, B subunit3e-0757.4
NC_013887:245236:276610276610277101492Methanocaldococcus sp. FS406-22 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein4e-0756.6
NC_014377:532816:5468405468405487171878Thermosediminibacter oceani DSM 16646 chromosome, complete genomeNADH dehydrogenase (quinone)5e-0756.2
NC_014632:113420:1309721309721320721101Ilyobacter polytropus DSM 2926 chromosome, complete genomedihydroorotate dehydrogenase family protein6e-0756.2
NC_014632:11925:2504825048260521005Ilyobacter polytropus DSM 2926 chromosome, complete genomeRnfABCDGE type electron transport complex subunit B9e-0755.5
NC_013156:226215:2355912355912367631173Methanocaldococcus fervens AG86, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0654.3
NC_014222:1411155:1421542142154214227291188Methanococcus voltae A3 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0654.3
NC_015574:1046500:104863310486331049397765Methanobacterium sp. SWAN-1 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein2e-0653.9
NC_014122:341365:3498593498593510371179Methanocaldococcus infernus ME chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein3e-0653.5
NC_000909:446364:455930455930456421492Methanocaldococcus jannaschii DSM 2661, complete genomepolyferredoxin (mvhB)3e-0653.5
NC_009635:1283830:1287142128714212883381197Methanococcus aeolicus Nankai-3 chromosome, complete genome4Fe-4S ferredoxin5e-0653.1
NC_018664:1729794:1741071174107117437642694Clostridium acidurici 9a chromosome, complete genomeNADP-dependent formate dehydrogenase FdhA5e-0653.1
NC_014253:1954024:197387419738741974746873Methanohalobium evestigatum Z-7303 chromosome, complete genomeRnfABCDGE type electron transport complex subunit B5e-0653.1
NC_015589:2049328:2073624207362420747301107Desulfotomaculum ruminis DSM 2154 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein4e-0653.1
NC_014365:2359760:2361929236192923649673039Desulfarculus baarsii DSM 2075 chromosome, complete genomeFAD dependent oxidoreductase4e-0653.1
NC_009697:419443:426289426289427122834Clostridium botulinum A str. ATCC 19397 chromosome, completeferredoxin5e-0652.8
NC_000909:1123161:1134586113458611357701185Methanocaldococcus jannaschii DSM 2661, complete genomepolyferredoxin (mvhB)7e-0652.4
NC_015562:899030:9373779373779385821206Methanotorris igneus Kol 5 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein8e-0652.4
NC_000916:1417981:1421167142116714221771011Methanothermobacter thermautotrophicus str. Delta H, completetungsten formylmethanofuran dehydrogenase, subunit F1e-0552