Pre_GI: BLASTP Hits

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Query: NC_014817:332000:346335 Asticcacaulis excentricus CB 48 chromosome 2, complete sequence

Start: 346335, End: 346922, Length: 588

Host Lineage: Asticcacaulis excentricus; Asticcacaulis; Caulobacteraceae; Caulobacterales; Proteobacteria; Bacteria

General Information: Environment: Fresh water; Isolation: Pondwater; Temp: Mesophile; Isolation: pond water. Asticcacaulis excentricus inhabits aquatic environments and plays an important part in biogeochemical cycling of organic nutrients. This bacterium undergoes an unusual developmental cycle in which a swarming motile cell becomes a stalked cell that is attached to a solid surface. The stalked cell then undergoes asymmetric cell division and produces one flagellated motile daughter cell and one stalked daughter cell. Thus, the asymmetric processes in this organism provide useful models for differentiation and development.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014098:2225174:224373822437382244325588Bacillus tusciae DSM 2912 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0960.1
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)6e-0753.9
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor3e-0651.6
NC_010002:4175809:418865341886534189231579Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0652
NC_015563:3401867:340751334075133408091579Delftia sp. Cs1-4 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor5e-0650.8
NC_021184:3149000:315104331510433151618576Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0755.8
NC_012912:1200000:122636512263651226940576Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0650.4
NC_013037:5395951:539916253991625399872711Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.6
NC_020054:1335699:135291713529171353507591Fibrella aestuarina BUZ 2 drat genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_016906:1458158:147173414717341472315582Gordonia polyisoprenivorans VH2 chromosome, complete genomesigma-70 family RNA polymerase sigma factor8e-0650.4
NC_017955:2327500:232853923285392329084546Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0756.6
NC_017080:1194199:119784911978491198454606Phycisphaera mikurensis NBRC 102666, complete genomeRNA polymerase ECF-type sigma factor1e-0653.1
NC_017986:5467279:548737254873725487980609Pseudomonas putida ND6 chromosome, complete genomeRNA polymerase sigma factor8e-0650.4
NC_014311:1106871:112273411227341123375642Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor, sigma-246e-0753.9
NC_015703:5272193:529904352990435299582540Runella slithyformis DSM 19594 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.6
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor5e-0650.8
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE5e-0754.3
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0754.3
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor4e-0858.2
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor2e-0755.8
NC_016114:3655005:367332236733223674023702Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.6
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor1e-0859.3
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor6e-0960.8
NC_014931:1642179:165110916511091651702594Variovorax paradoxus EPS chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.9
NC_014931:1044313:106127810612781061889612Variovorax paradoxus EPS chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652