Pre_GI: BLASTN Hits

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Query: NC_014802:1392831 Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, complete

Start: 1392831, End: 1413684, Length: 20854

Host Lineage: Campylobacter jejuni; Campylobacter; Campylobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: Gram-negative, microaerophilic, flagellate, spiral bacterium, Campylobacter species are the leading cause of food-borne gastroenteritis in developed countries. Infection with C. jejuni is the most frequent antecedent to a form of neuromuscular paralysis known as Guillain-Barre syndrome (GBS). Strain ICDCCJ07001 was isolated following a GBS outbreak in Shuangyang, a town in northern China in 2007, from a severely affected 15 year-old girl GBS patient who had been on a ventilator for 180 days. Her clinical symptoms were motor axonal neuropathy. This organism is the leading cause of bacterial food poisoning (campylobacteriosis) in the world, and is more prevalent than Salmonella enteritis (salmonellosis). Found throughout nature, it can colonize the intestines of both mammals and birds, and transmission to humans occurs via contaminated food products. This organism can invade the epithelial layer by first attaching to epithelial cells, then penetrating through them. Systemic infections can also occur causing more severe illnesses.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008787:1345988*1345988137061924632Campylobacter jejuni subsp. jejuni 81-176, complete genome01467BLASTN svgBLASTP svg
NC_002163:13542151354215137844524231Campylobacter jejuni subsp. jejuni NCTC 11168, complete genome3e-98367BLASTN svgBLASTP svg
NC_012039:257962*25796228248324522Campylobacter lari RM2100, complete genome7e-19103BLASTN svgBLASTP svg
NC_014803:475355*47535549809922745Pseudoalteromonas sp. SM9913 chromosome chromosome I, complete4e-1797.6BLASTN svgBLASTP svg
NC_004547:16009001600900162975328854Erwinia carotovora subsp. atroseptica SCRI1043, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015676:1736375*1736375177700440630Methanosalsum zhilinae DSM 4017 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014506:14824011482401150477822378Sulfurimonas autotrophica DSM 16294 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015578:18074281807428184533137904Treponema primitia ZAS-2 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007954:3171081*3171081321159940519Shewanella denitrificans OS217, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013515:347671*34767139636648696Streptobacillus moniliformis DSM 12112, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011753:20617820617823311626939Vibrio splendidus LGP32 chromosome 1, complete genome6e-0763.9BLASTN svgBLASTP svg