Pre_GI: BLASTP Hits

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Query: NC_014666:5449884:5452454 Frankia sp. EuI1c chromosome, complete genome

Start: 5452454, End: 5453449, Length: 996

Host Lineage: Frankia; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Host, Plant symbiont, Soil; Temp: Mesophile. Frankia sp. EuI1c was isolated from the Autumn olive, Elaeagnus umbellata. Frankia sp. (strain EuI1c) is an aerobic Gram-positive bacterium isolated from four continents (North America, South America, Africa, and Asia) and different habitats, including dry soils with high salinity levels, steppe-like plains at 900 m, and mountain forests at 3,000 m.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013131:3473843:3473843347384334748471005Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-77289
NC_013510:4319296:433794943379494338947999Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-53210
NC_014815:5888934:589354558935455894543999Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily8e-47187
NC_009953:3316782:3328358332835833294311074Salinispora arenicola CNS-205 chromosome, complete genomeRNA polymerase factor sigma-705e-45181
NC_014666:4419693:4438717443871744400121296Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-44179
NC_016935:4038265:405515440551544056110957Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-39162
NC_016109:327826:348659348659349585927Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor2e-37156
NC_012914:5225609:523278752327875233743957Paenibacillus sp. JDR-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-36153
NC_014318:6817860:683774368377436838723981Amycolatopsis mediterranei U32 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily8e-33141
NC_017186:6817904:683778768377876838761975Amycolatopsis mediterranei S699 chromosome, complete genomeRNA polymerase factor sigma-701e-32140
NC_015690:3477573:349535034953503496201852Paenibacillus mucilaginosus KNP414 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-30132
NC_013169:513327:539599539599540546948Kytococcus sedentarius DSM 20547, complete genomeRNA polymerase sigma-70 factor, TIGR02960 family2e-28126
NC_013947:3785332:381242738124273813008582Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-1789.7
NC_017904:2641270:266192226619222662830909Mycobacterium sp. MOTT36Y chromosome, complete genomeECF family RNA polymerase sigma factor5e-1168.9
NC_014330:1957725:196524019652401965806567Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma-24 subunit6e-1168.6
NC_019908:1296870:130311113031111303680570Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma-24 subunit6e-1168.6
NC_017955:3731480:383478738347873835308522Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-1067
NC_016109:3963189:396631339663133967236924Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor3e-1066.2
NC_013929:9038500:903995490399549040901948Streptomyces scabiei 87.22 chromosome, complete genomesigma factor3e-1066.2
NC_014150:1006000:102603910260391026611573Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1065.1
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor6e-1065.1
NC_015312:1191633:120925612092561210143888Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0964.3
NC_016641:5926000:592727759272775928050774Paenibacillus terrae HPL-003 chromosome, complete genomeDNA-directed RNA polymerase subunit sigma4e-0962.8
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0860.8
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor3e-0859.7
NC_008554:1623041:164580616458061646414609Syntrophobacter fumaroxidans MPOB, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0859.3
NC_020133:3787844:380841538084153809068654Mycobacterium liflandii 128FXT, complete genomealternative RNA polymerase sigma factor7e-0858.2
NC_012560:2315350:232811423281142328680567Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma-70 factor7e-0858.2
NC_021150:2315362:232812623281262328692567Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor SigX7e-0858.2
NC_015673:464630:467907467907468443537Corynebacterium resistens DSM 45100 chromosome, complete genomeECF-family sigma factor W1e-0757.4
NC_016609:4834378:488406148840614884942882Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0757.4
NC_013729:1556922:157591315759131576869957Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0755.8
NC_018681:2985078:300081030008103001703894Nocardia brasiliensis ATCC 700358 chromosome, complete genomeputative Sigma factor, sigma 70 type, group 4 (ECF)5e-0755.5
NC_011891:4450031:447536544753654476306942Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0755.5
NC_002944:2373873:239794423979442398834891Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein7e-0755.1
NC_015064:2341152:236514523651452365786642Acidobacterium sp. MP5ACTX9 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0653.9
NC_013093:1411882:141263314126331413622990Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0652.8
NC_009953:3552738:355452635545263555413888Salinispora arenicola CNS-205 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor5e-0652.4
NC_013947:2113941:214394221439422144847906Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily5e-0652.4
NC_009921:3384116:338747933874793388363885Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0652
NC_016935:1365463:137867613786761379554879Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF family RNA polymerase sigma factor8e-0651.6