Pre_GI: BLASTP Hits

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Query: NC_014666:4547873:4556746 Frankia sp. EuI1c chromosome, complete genome

Start: 4556746, End: 4557366, Length: 621

Host Lineage: Frankia; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Host, Plant symbiont, Soil; Temp: Mesophile. Frankia sp. EuI1c was isolated from the Autumn olive, Elaeagnus umbellata. Frankia sp. (strain EuI1c) is an aerobic Gram-positive bacterium isolated from four continents (North America, South America, Africa, and Asia) and different habitats, including dry soils with high salinity levels, steppe-like plains at 900 m, and mountain forests at 3,000 m.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014666:4547873:455305045530504553733684Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-71266
NC_015434:3581001:359056835905683591095528Verrucosispora maris AB-18-032 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily protein1e-28126
NC_015957:527777:538567538567539109543Streptomyces violaceusniger Tu 4113 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-26118
NC_013131:7530000:754581375458137546373561Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-25114
NC_015434:4640769:466706546670654667562498Verrucosispora maris AB-18-032 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily protein1e-24113
NC_009664:4347718:437238843723884373200813Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-22105
NC_015953:3782302:380522238052223805776555Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit6e-21100
NC_013929:1119384:113906711390671139573507Streptomyces scabiei 87.22 chromosome, complete genomesigma factor1e-2099.8
NC_021177:4124839:414665741466574147223567Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase ECF-subfamily sigma factor1e-2099.4
NC_013595:3952196:396014139601413960653513Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1994.4
NC_015953:3159234:316146431614643162048585Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit9e-1993.6
NC_014318:1537732:154374515437451544242498Amycolatopsis mediterranei U32 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-1789.7
NC_016582:5769080:578069657806965781226531Streptomyces bingchenggensis BCW-1 chromosome, complete genomeECF subfamily RNA polymerase sigma factor1e-1686.7
NC_015671:1865752:188091018809101881560651Cellvibrio gilvus ATCC 13127 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1686.3
NC_014830:4012999:100361003610545510Intrasporangium calvum DSM 43043 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1686.3
NC_009664:4423829:462452046245204625191672Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1686.3
NC_017955:3670670:368276836827683683406639Modestobacter marinus, complete genomeRNA polymerase sigma-E factor1e-1686.3
NC_009664:4423829:467450146745014674992492Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1684.7
NC_016582:5769080:579130957913095791824516Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative sigma factor2e-1582.4
NC_010572:3925803:395301139530113953586576Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative RNA polymerase ECF-subfamily sigma factor6e-1477.4
NC_017093:3777178:379561837956183796130513Actinoplanes missouriensis 431, complete genomeputative RNA polymerase ECF-subfamily sigma factor1e-1376.6
NC_016111:3052494:309113230911323091815684Streptomyces cattleya NRRL 8057, complete genomeRNA polymerase ECF-subfamily sigma factor1e-1376.6
NC_013131:10413240:104313391043133910431857519Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1376.6
NC_013729:6217500:621908162190816219575495Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1272.8
NC_015957:336500:352252352252352833582Streptomyces violaceusniger Tu 4113 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-1272
NC_016109:2938000:295136229513622951883522Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor3e-1168.6
NC_013510:5175649:517647651764765177051576Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1066.6
NC_013947:3406000:341769134176913418221531Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily4e-1064.7
NC_014815:658893:678552678552679058507Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily1e-0963.2
NC_014960:72737:752717527175828558Anaerolinea thermophila UNI-1, complete genomeRNA polymerase ECF-type sigma factor2e-0962.8
NC_014391:2875553:288034328803432880780438Micromonospora aurantiaca ATCC 27029 chromosome, complete genomesigma-70 family RNA polymerase2e-0962.8
NC_009664:4696961:473045147304514731020570Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0960.5
NC_021184:3174500:320020332002033200760558Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family9e-0960.1
NC_015311:1157679:115767911576791158305627Prevotella denticola F0289 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0859.7
NC_019673:3253650:325714232571423257648507Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0858.2
NC_014833:3268102:327741332774133277916504Ruminococcus albus 7 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0858.2
NC_016109:4088259:408825940882594088831573Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor7e-0857.4
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0857
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H1e-0756.2
NC_012880:3982383:400842040084204008974555Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.8
NC_011758:369704:379094379094379606513Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.8
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0755.5
NC_020054:1335699:135291713529171353507591Fibrella aestuarina BUZ 2 drat genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0754.3
NC_002516:1474000:147472714747271475467741Pseudomonas aeruginosa PAO1, complete genomeprobable sigma-70 factor, ECF subfamily6e-0754.3
NC_009720:2945655:295479629547962955302507Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-0653.5
NC_009720:251703:267010267010267516507Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-0653.5
NC_020301:1486695:150583015058301506384555Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeRNA polymerase sigma factor2e-0652.8
NC_013131:10322152:103279401032794010328452513Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.8
NC_011992:1318691:131869113186911319206516Acidovorax ebreus TPSY, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.8
NC_009925:1184442:118898911889891189603615Acaryochloris marina MBIC11017, complete genomeRNA polymerase sigma-24 subunit2e-0652.4
NC_008786:1936626:194198719419871942556570Verminephrobacter eiseniae EF01-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.4
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit4e-0651.2