Pre_GI: BLASTP Hits

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Query: NC_014355:3951855:3959824 Candidatus Nitrospira defluvii, complete genome

Start: 3959824, End: 3960999, Length: 1176

Host Lineage: Nitrospira defluvii; Nitrospira; Nitrospiraceae; Nitrospirales; Nitrospirae; Bacteria

General Information: This nitrite-oxidizing bacterium was found through enrichment from activated sludge from a municipal wastewater treatment plant. Phylogenetic analysis of 16S rRNA gene sequences revealed that the enriched bacteria represented a novel Nitrospira species closely related to uncultured Nitrospira-like bacteria previously found in wastewater treatment plants and nitrifying bioreactors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014355:3951855:3970106397010639713381233Candidatus Nitrospira defluvii, complete genomeputative phage integrase9e-58224
NC_006350:3957454:396679739667973967651855Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative bacteriophage integrase1e-1481.3
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase5e-1479.3
NC_020911:3046916:3057856305785630589891134Octadecabacter antarcticus 307, complete genomeDNA integration/recombination/inversion protein2e-1377
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase1e-1274.3
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase3e-1273.2
NC_015514:3508022:3525391352539135265331143Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase family protein5e-1272.4
NC_020911:2921925:2929766292976629308961131Octadecabacter antarcticus 307, complete genomeputative phage integrase8e-1272
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase5e-1168.9
NC_010577:1188438:1204296120429612055281233Xylella fastidiosa M23, complete genomeintegrase family protein1e-1068.2
NC_004556:1178897:1194756119475611959881233Xylella fastidiosa Temecula1, complete genomephage-related integrase1e-1068.2
NC_015388:1020747:102930310293031030148846Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeintegrase family protein2e-1067.4
NC_015942:403296:4146714146714157651095Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein2e-1067.4
NC_015593:2553500:2557151255715125582871137Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein4e-1066.2
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase4e-1066.2
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein4e-1066.2
NC_011891:17940:2105121051222951245Anaeromyxobacter dehalogenans 2CP-1, complete genomeintegrase family protein1e-0964.7
NC_017030:8599515:8613843861384386150331191Corallococcus coralloides DSM 2259 chromosome, complete genomephage integrase family site specific recombinase4e-0963.2
NC_007626:959684:9702309702309713091080Magnetospirillum magneticum AMB-1, complete genomeIntegrase4e-0962.8
NC_014216:2538500:255809425580942559092999Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeintegrase family protein4e-0962.8
NC_011757:5693584:5696052569605256971161065Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein5e-0962.8
NC_013282:1200993:1204148120414812053111164Cronobacter turicensis, complete genomeProphage DLP12 integrase8e-0962
NC_014844:442380:4744144744144754451032Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase family protein8e-0962
NC_010084:534937:541878541878542864987Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein1e-0861.2
NC_007759:2179000:2183062218306221841561095Syntrophus aciditrophicus SB, complete genomephage integrase family protein2e-0860.8
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family2e-0860.8
NC_021184:4456904:446470544647054465562858Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD2e-0860.5
NC_008609:3921113:3938275393827539394831209Pelobacter propionicus DSM 2379, complete genomephage integrase family protein4e-0859.7
NC_011751:643976:6449436449436461061164Escherichia coli UMN026 chromosome, complete genomeputative integrase; DLP12 prophage4e-0859.7
NC_011415:600375:6083326083326094951164Escherichia coli SE11 chromosome, complete genomephage integrase4e-0859.7
NC_000913:558920:5640385640385652011164Escherichia coli K12, complete genomeDLP12 prophage; predicted integrase4e-0859.7
NC_010473:498252:5033705033705045331164Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted integrase4e-0859.7
NC_010793:1922000:1940379194037919415181140Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase4e-0859.7
AC_000091:558920:5640385640385652011164Escherichia coli W3110 DNA, complete genomepredicted integrase4e-0859.7
NC_012759:461680:4667984667984679611164Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative integrase4e-0859.7
NC_016860:364981:3688873688873700501164Salmonella enterica subsp. enterica serovar Typhimurium strintegrase4e-0859.7
NC_014391:16188:1618816188173391152Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein5e-0859.3
NC_012796:3374911:3425871342587134269291059Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase4e-0859.3
NC_012947:3231893:3247313324731332484761164Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase4e-0859.3
NC_012967:531000:5369295369295380921164Escherichia coli B str. REL606 chromosome, complete genomeputative integrase4e-0859.3
NC_008825:4025705:4038547403854740397581212Methylibium petroleiphilum PM1, complete genomephage-related integrase7e-0858.9
NC_009076:3876733:388817438881743888692519Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family9e-0858.5
NC_011094:593100:6007016007016018641164Salmonella enterica subsp. enterica serovar Schwarzengrund strprophage DLP12 integrase9e-0858.2
NC_006905:368942:3728473728473740101164Salmonella enterica subsp. enterica serovar Choleraesuis strInt1e-0757.8
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein1e-0757.8
NC_010501:4379920:4392912439291243939341023Pseudomonas putida W619, complete genomeintegrase family protein2e-0757.4
NC_017167:351069:3541843541843551881005Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein2e-0757.4
NC_008260:2340824:2352446235244623535491104Alcanivorax borkumensis SK2, complete genomeshufflon-specific DNA recombinase3e-0757
NC_007520:903799:9043479043479053721026Thiomicrospira crunogena XCL-2, complete genomePhage integrase2e-0757
NC_009074:3791232:380235838023583802657300Burkholderia pseudomallei 668 chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-0757
NC_007298:1129889:1137870113787011388861017Dechloromonas aromatica RCB, complete genomePhage integrase2e-0757
NC_014414:1140357:1144723114472311460451323Parvularcula bermudensis HTCC2503 chromosome, complete genomePhage integrase2e-0757
NC_011745:3443371:3443889344388934450131125Escherichia coli ED1a chromosome, complete genomeShufflon-specific DNA recombinase2e-0757
NC_015850:1006980:1008592100859210096021011Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phage integrase2e-0757
NC_011083:374000:3768503768503780131164Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,site-specific recombinase, phage integrase family3e-0756.6
NC_012214:2805297:282140528214052822034630Erwinia pyrifoliae Ep1/96, complete genomephage integrase family, fragment3e-0756.6
NC_014391:1910273:1918870191887019200061137Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein3e-0756.6
NC_020418:3133831:3146831314683131479941164Morganella morganii subsp. morganii KT, complete genomeintegrase4e-0756.2
NC_012796:1049034:1098591109859110997391149Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase4e-0756.2
NC_011205:609464:6170646170646182271164Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853prophage DLP12 integrase3e-0756.2
NC_014623:1074299:1120983112098311221911209Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein5e-0755.8
NC_014623:2418762:2452315245231524535021188Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein8e-0755.5
NC_015671:557720:5618825618825630091128Cellvibrio gilvus ATCC 13127 chromosome, complete genomeintegrase family protein7e-0755.5
NC_014623:7482229:7485115748511574862601146Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein7e-0755.5
NC_007760:4055860:408811340881134088940828Anaeromyxobacter dehalogenans 2CP-C, complete genomePhage integrase7e-0755.5
NC_012796:1049034:1064468106446810655861119Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase6e-0755.5
NC_015580:141379:1621711621711633671197Novosphingobium sp. PP1Y, complete genomephage integrase9e-0755.1
NC_012751:1538500:1538746153874615398911146Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeAPSE-2 prophage; integrase1e-0654.7
NC_007626:3996000:4009811400981140109021092Magnetospirillum magneticum AMB-1, complete genomeIntegrase1e-0654.7
NC_007651:3719191:373247537324753732954480Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-0653.9
NC_006526:1976779:1984282198428219854811200Zymomonas mobilis subsp. mobilis ZM4, complete genomeintegrase2e-0653.9
NC_016845:1285435:1288374128837412895371164Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,site-specific recombinase, phage integrase family2e-0653.9
NC_011283:4212000:4229167422916742303301164Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase2e-0653.9
NC_003911:1265972:1279111127911112802381128Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family2e-0653.9
NC_004463:925140:940715940715941704990Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase3e-0653.5
NC_014623:1600360:1600360160036016015471188Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein2e-0653.5
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family3e-0653.1
NC_011206:1233985:123407912340791235074996Acidithiobacillus ferrooxidans ATCC 53993, complete genomeintegrase family protein3e-0653.1
NC_009052:4335754:4352962435296243540921131Shewanella baltica OS155, complete genomephage integrase family protein5e-0652.4
NC_012880:3529017:3548469354846935495931125Dickeya dadantii Ech703, complete genomeintegrase family protein5e-0652.4
NC_014830:3275474:3280621328062132817451125Intrasporangium calvum DSM 43043 chromosome, complete genomeintegrase family protein7e-0652
NC_020387:796253:8023368023368034931158Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, phage integrase family7e-0652
NC_019673:3041936:3044993304499330466181626Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein9e-0651.6
NC_015580:3252534:326114932611493261649501Novosphingobium sp. PP1Y, complete genomephage-related integrase9e-0651.6
NC_010511:4313769:4325412432541243264611050Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-0551.6