Pre_GI: BLASTP Hits

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Query: NC_014355:220002:238023 Candidatus Nitrospira defluvii, complete genome

Start: 238023, End: 238568, Length: 546

Host Lineage: Nitrospira defluvii; Nitrospira; Nitrospiraceae; Nitrospirales; Nitrospirae; Bacteria

General Information: This nitrite-oxidizing bacterium was found through enrichment from activated sludge from a municipal wastewater treatment plant. Phylogenetic analysis of 16S rRNA gene sequences revealed that the enriched bacteria represented a novel Nitrospira species closely related to uncultured Nitrospira-like bacteria previously found in wastewater treatment plants and nitrifying bioreactors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014206:1497942:150841915084191509048630Geobacillus sp. C56-T3 chromosome, complete genomeLuxR family transcriptional regulator2e-0755.8
NC_013411:2951559:296736429673642967993630Geobacillus sp. Y412MC61, complete genometwo component transcriptional regulator, LuxR family2e-0755.8
NC_014915:2092678:210729521072952107924630Geobacillus sp. Y412MC52 chromosome, complete genometwo component transcriptional regulator, LuxR family2e-0755.8
NC_006510:2110430:212705221270522127681630Geobacillus kaustophilus HTA426, complete genometwo component response regulator2e-0755.8
NC_016609:7565483:756867775686777569318642Niastella koreensis GR20-10 chromosome, complete genometwo component transcriptional regulator, LuxR family4e-0754.3
NC_016943:336550:356544356544357191648Blastococcus saxobsidens DD2, complete genomeputative Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain2e-0652
NC_016810:3993863:401186640118664012456591Salmonella enterica subsp. enterica serovar Typhimurium strtwo-component system response regulator protein3e-0651.2
NC_011083:3985618:400476340047634005353591Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulatory protein UhpA3e-0651.2
NC_003197:3971905:399055439905543991144591Salmonella typhimurium LT2, complete genomeresponse regulator3e-0651.2
NC_013037:2043921:206658620665862067209624Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LuxR family3e-0651.2
NC_004337:3590323:390070439007043901294591Shigella flexneri 2a str. 301, complete genomeresponse regulator3e-0651.2
NC_016857:3993864:401186740118674012520654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA-binding transcriptional activator UhpA3e-0651.2
NC_012125:3905782:392501239250123925665654Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA-binding transcriptional activator UhpA4e-0651.2
NC_006905:3913988:393022039302203930873654Salmonella enterica subsp. enterica serovar Choleraesuis strresponse regulator (repressor) in two-component regulatory system wtih UhpB, regulates uhpT operon (LuxR/UhpA family)4e-0651.2
NC_016856:3985597:400424640042464004836591Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA-binding transcriptional activator UhpA3e-0651.2
NC_016860:4055117:409566540956654096255591Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding transcriptional activator UhpA3e-0651.2
NC_011147:3755725:377436437743643774954591Salmonella enterica subsp. enterica serovar Paratyphi A strDNA-binding transcriptional activator UhpA3e-0651.2
NC_011094:3853036:387226638722663872856591Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-binding transcriptional activator UhpA3e-0651.2
NC_010102:3919999:393864839386483939238591Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0651.2
NC_006511:3759550:377868537786853779275591Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtwo-component system response regulator protein3e-0651.2
NC_011080:3941909:396113839611383961728591Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulatory protein UhpA3e-0651.2
NC_011149:3895921:391506639150663915656591Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulatory protein UhpA3e-0651.2
NC_017046:3991551:401069440106944011284591Salmonella enterica subsp. enterica serovar Typhimurium str. 798two-component system response regulator protein3e-0651.2
NC_016863:3933848:395185339518533952443591Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA-binding transcriptional activator UhpA3e-0651.2
NC_021066:4177217:417662741766274177220594Raoultella ornithinolytica B6, complete genomeDNA-binding transcriptional activator UhpA5e-0650.8
NC_010524:4788753:479252847925284793181654Leptothrix cholodnii SP-6, complete genometwo component transcriptional regulator, LuxR family5e-0650.8
NC_011601:4096427:415036341503634150953591Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional activator UhpA5e-0650.4
NC_008027:2648560:265985426598542660426573Pseudomonas entomophila L48, complete genomePAS domain containing response regulator, LuxR family9e-0650.1