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Query: NC_014334:589526 Lactobacillus casei str. Zhang chromosome, complete genome

Start: 589526, End: 612598, Length: 23073

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus casei str. Zhang was isolated from traditional home-made koumiss (fermented mare's milk) in Inner Mongolia, China. This strain has the potential probiotic properties such as high resistance to acidic pH and bile salt. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014334:36997436997439377323800Lactobacillus casei str. Zhang chromosome, complete genome02089BLASTN svgBLASTP svg
NC_014334:49330849330851458821281Lactobacillus casei str. Zhang chromosome, complete genome02087BLASTN svgBLASTP svg
NC_008526:50626350626352818721925Lactobacillus casei ATCC 334, complete genome02066BLASTN svgBLASTP svg
NC_008526:56590256590259093225031Lactobacillus casei ATCC 334, complete genome02060BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome02060BLASTN svgBLASTP svg
NC_008526:23731902373190239665623467Lactobacillus casei ATCC 334, complete genome02052BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome02044BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome02006BLASTN svgBLASTP svg
NC_014334:19543331954333198420029868Lactobacillus casei str. Zhang chromosome, complete genome01988BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome01877BLASTN svgBLASTP svg
NC_008526:250000*25000027159921600Lactobacillus casei ATCC 334, complete genome1e-51212BLASTN svgBLASTP svg
NC_008526:74500*7450011650442005Lactobacillus casei ATCC 334, complete genome7e-50206BLASTN svgBLASTP svg
NC_014334:99000*9900012029021291Lactobacillus casei str. Zhang chromosome, complete genome2e-47198BLASTN svgBLASTP svg
NC_010999:2450974*2450974247597425001Lactobacillus casei, complete genome1e-29139BLASTN svgBLASTP svg
NC_013199:11500001150000117399223993Lactobacillus rhamnosus Lc 705, complete genome2e-28135BLASTN svgBLASTP svg
NC_010999:21557142155714218202826315Lactobacillus casei, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010999:24830002483000250109918100Lactobacillus casei, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015759:66750566750568645218948Weissella koreensis KACC 15510 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013592:45114784511478453986728390Dickeya dadantii Ech586, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007929:11109211109213418323092Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012779:36527373652737367609923363Edwardsiella ictaluri 93-146, complete genome3e-0661.9BLASTN svgBLASTP svg