Pre_GI: BLASTP Hits

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Query: NC_014328:3747973:3751655 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 3751655, End: 3751996, Length: 342

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012673:785718:792796792796793152357Exiguobacterium sp. AT1b, complete genometranscriptional regulator, PadR-like family4e-27119
NC_003366:863437:878020878020878352333Clostridium perfringens str. 13, complete genome30S ribosomal protein homolog2e-25114
NC_008261:817295:834077834077834409333Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, PadR family7e-25112
NC_014393:4612301:463298446329844633328345Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, PadR-like family2e-24110
NC_019897:700332:733396733396733758363Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator4e-23106
NC_014393:4352216:437518143751814375525345Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, PadR-like family9e-22102
NC_004193:375416:420145420145420480336Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-2097.8
NC_011725:1032500:104332810433281043660333Bacillus cereus B4264 chromosome, complete genomePadR family transcriptional regulator2e-1994.7
NC_017208:1050414:106205310620531062385333Bacillus thuringiensis serovar chinensis CT-43 chromosome, completePadR family transcriptional regulator2e-1994.7
NC_004722:1008500:101926110192611019602342Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, PadR family1e-1994.7
NC_014330:1010000:101901510190151019344330Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative transcriptional regulator2e-1994.4
NC_019908:2183215:219799821979982198327330Brachyspira pilosicoli P43/6/78 chromosome, complete genometranscriptional regulator3e-1994
NC_014171:1018338:102901910290191029351333Bacillus thuringiensis BMB171 chromosome, complete genomePadR family transcriptional regulator5e-1992.8
NC_010184:1017000:102748510274851027817333Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family2e-1891.3
NC_015690:790500:804304804304804633330Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator2e-1891.3
NC_016935:789849:805610805610805939330Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR-like family transcriptional regulator4e-1890.1
NC_008278:2813362:282291428229142823243330Frankia alni ACN14a, complete genomePutative PadR family transcriptional regulator7e-1889.4
NC_015690:6595395:660345166034516603786336Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator3e-1787.4
NC_012778:364728:368015368015368353339Eubacterium eligens ATCC 27750, complete genomehypothetical protein6e-1786.3
NC_015589:814530:827671827671828009339Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator PadR family protein1e-1685.1
NC_018664:2638102:264078026407802641118339Clostridium acidurici 9a chromosome, complete genometranscriptional regulator, PadR family6e-1579.7
NC_007907:4956500:496671849667184967065348Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-1475.9
NC_011830:1037520:105271710527171053064348Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, PadR-like family8e-1372.4
NC_009464:931647:932620932620932970351Uncultured methanogenic archaeon RC-I, complete genomeputative transcription regulator (PadR family)1e-1168.6
NC_013665:1766158:179097717909771791321345Methanocella paludicola SANAE, complete genomeputative PadR-like family transcriptional regulator1e-1168.6
NC_013406:1145268:114943211494321149938507Paenibacillus sp. Y412MC10 chromosome, complete genomePadR-like family transcriptional regulator4e-1166.6
NC_010184:4497473:450447345044734504817345Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family7e-1165.9
NC_005957:4472800:447576544757654476109345Bacillus thuringiensis serovar konkukian str. 97-27, completepossible transcriptional regulator, PadR family9e-1165.5
NC_012483:996555:101723810172381017600363Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, PadR family1e-1065.5
NC_013730:4573077:459200745920074592351345Spirosoma linguale DSM 74, complete genometranscriptional regulator, PadR-like family6e-1062.8
NC_015690:2039215:204633620463362046665330Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator8e-1062.4
NC_015275:1480500:149883014988301499192363Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, PadR-like family1e-0962
NC_014335:4414052:441474244147424415086345Bacillus cereus biovar anthracis str. CI chromosome, completeputative PadR family transcriptional regulator2e-0961.2
NC_018704:1424728:142569314256931426040348Amphibacillus xylanus NBRC 15112, complete genomeputative PadR family transcriptional regulator1e-0858.9
NC_014624:828943:843139843139843462324Eubacterium limosum KIST612 chromosome, complete genometranscription regulator (putative)1e-0858.9
NC_015500:2417041:242087724208772421203327Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, PadR-like family2e-0857.4
NC_009328:293000:348394348394348717324Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator3e-0857.4
NC_006348:2738425:275557927555792755920342Burkholderia mallei ATCC 23344 chromosome 1, complete sequencetranscriptional regulator, PadR family9e-0855.8
NC_008009:2430509:244906824490682449397330Acidobacteria bacterium Ellin345, complete genometranscriptional regulator, PadR-like family1e-0755.5
NC_016935:2567039:259505025950502595394345Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR-like family transcriptional regulator2e-0754.7
NC_004193:375416:597160597160597489330Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-0754.7
NC_015683:2249949:227154922715492271923375Corynebacterium ulcerans BR-AD22 chromosome, complete genomePadR family transcription regulator3e-0753.9
NC_017317:2149794:217301021730102173384375Corynebacterium ulcerans 809 chromosome, complete genomePadR-family transcription regulator3e-0753.9
NC_006582:2205154:221626422162642216584321Bacillus clausii KSM-K16, complete genometranscriptional regulator, PadR family5e-0753.1
NC_014963:4091910:410257441025744102915342Terriglobus saanensis SP1PR4 chromosome, complete genomePadR family transcriptional regulator6e-0752.8
NC_011773:4541306:454435645443564544616261Bacillus cereus AH820 chromosome, complete genomePadR family transcriptional regulator7e-0752.8
NC_013891:640784:661436661436661762327Listeria seeligeri serovar 1/2b str. SLCC3954, complete genometranscriptional regulator, PadR family2e-0651.6
NC_014963:4416339:442588144258814426225345Terriglobus saanensis SP1PR4 chromosome, complete genomePadR family transcriptional regulator2e-0651.6
NC_011660:1889504:189448518944851894811327Listeria monocytogenes HCC23 chromosome, complete genomePadR family transcriptional regulator2e-0651.2
NC_009033:755226:756710756710757102393Staphylothermus marinus F1, complete genometranscriptional regulator, PadR-like family3e-0650.4
NC_007644:2452244:246911124691112469470360Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, PadR-like family4e-0650.1
NC_015144:367278:373210373210373542333Weeksella virosa DSM 16922 chromosome, complete genometranscriptional regulator, PadR-like family5e-0649.7
NC_013037:6209424:621816562181656218518354Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, PadR-like family6e-0649.7