Pre_GI: BLASTP Hits

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Query: NC_014328:3682000:3687411 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 3687411, End: 3688286, Length: 876

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018664:1795223:181566518156651816531867Clostridium acidurici 9a chromosome, complete genomeprotein-export membrane protein SecF1e-46186
NC_013520:718732:720003720003720896894Veillonella parvula DSM 2008, complete genomeprotein-export membrane protein SecF5e-38158
NC_013517:2909798:291486929148692915795927Sebaldella termitidis ATCC 33386, complete genomeprotein-export membrane protein SecF1e-36154
NC_010382:3783879:3801685380168538039102226Lysinibacillus sphaericus C3-41, complete genomeprotein-export membrane protein7e-36151
NC_013192:1941002:194753019475301948501972Leptotrichia buccalis DSM 1135, complete genomeprotein-export membrane protein SecF4e-34145
NC_003454:1346500:135842613584261359379954Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeProtein translocase subunit secF3e-34145
NC_014632:402500:414162414162415052891Ilyobacter polytropus DSM 2926 chromosome, complete genomeprotein translocase subunit secF6e-34144
NC_018697:1343756:134375613437561344691936Cycloclasticus sp. P1 chromosome, complete genomePreprotein translocase subunit SecF9e-34144
NC_011059:1:151901519016119930Prosthecochloris aestuarii DSM 271, complete genomeprotein-export membrane protein SecF2e-31135
NC_008601:1151653:115507811550781156022945Francisella tularensis subsp. novicida U112, complete genomepreprotein translocase, subunit F, membrane protein8e-31134
NC_007333:430000:4310844310844338192736Thermobifida fusca YX, complete genomeSecD/SecF/SecDF export membrane protein6e-31134
NC_018012:3401854:342196534219653422912948Thiocystis violascens DSM 198 chromosome, complete genomeprotein translocase subunit secF3e-30132
NC_004722:4333643:4346797434679743490612265Bacillus cereus ATCC 14579, complete genomeProtein translocase subunit SecD / Protein translocase subunit SecF1e-29130
NC_015557:114648:114648114648115529882Hydrogenobaculum sp. 3684 chromosome, complete genomeprotein-export membrane protein SecF1e-29130
NC_020411:114683:114683114683115564882Hydrogenobaculum sp. HO, complete genomeprotein-export membrane protein SecF1e-29130
NC_015587:114684:114684114684115565882Hydrogenobaculum sp. SHO chromosome, complete genomeprotein-export membrane protein SecF1e-29130
NC_013939:106681:106681106681107580900Deferribacter desulfuricans SSM1, complete genomepreprotein translocase subunit F3e-29129
NC_009465:938378:938378938378939292915Candidatus Vesicomyosocius okutanii HA, complete genomepreprotein translocase SecF subunit3e-29129
NC_015722:1050023:105002310500231050934912Candidatus Midichloria mitochondrii IricVA chromosome, completepreprotein translocase subunit SecF2e-28126
NC_011725:4373721:4390032439003243922962265Bacillus cereus B4264 chromosome, complete genomebifunctional preprotein translocase subunit SecD/SecF2e-28126
NC_016024:156000:1578501578501591301281Candidatus Chloracidobacterium thermophilum B chromosome chromosomeprotein-export membrane protein SecF2e-27123
NC_015496:2155816:2172082217208221750632982Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeprotein-export membrane protein SecD2e-27122
NC_015581:1133775:1133775113377511348211047Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeprotein-export membrane protein SecF3e-27122
NC_014355:3248386:325163932516393252556918Candidatus Nitrospira defluvii, complete genomeprotein-export membrane protein SecF3e-27122
NC_008610:1068429:107138710713871072313927Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),protein-export membrane protein SecF5e-27121
NC_017192:497950:517951517951518919969Arcobacter sp. L, complete genomepreprotein translocase subunit SecF9e-27120
NC_012660:5571500:557158355715835572497915Pseudomonas fluorescens SBW25 chromosome, complete genomepreprotein translocase subunit SecF1e-26120
NC_012559:978419:978419978419979399981Laribacter hongkongensis HLHK9, complete genomeSecF6e-26118
NC_013894:1194458:119536711953671196248882Thermocrinis albus DSM 14484 chromosome, complete genomeprotein-export membrane protein SecF2e-25116
NC_015379:1151143:117831611783161179230915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative Sec protein secretion system, subunit SecF2e-25116
NC_014041:4093190:4093190409319040961802991Zunongwangia profunda SM-A87 chromosome, complete genomebifunctional preprotein translocase subunit SecD/SecF2e-25116
NC_016830:1182765:120793012079301208844915Pseudomonas fluorescens F113 chromosome, complete genomeprotein SecF1e-25116
NC_010546:4786000:480177948017794802705927Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceprotein export membrane protein5e-25115
NC_013501:1691532:169509316950931696019927Rhodothermus marinus DSM 4252, complete genomeprotein-export membrane protein SecF5e-24111
NC_020054:2066510:2069969206996920730853117Fibrella aestuarina BUZ 2 drat genomeprotein-export membrane protein SecD6e-24111
NC_007492:5214709:521629552162955217209915Pseudomonas fluorescens PfO-1, complete genomeprotein export protein SecF2e-23109
NC_006156:685344:694552694552695451900Borrelia garinii PBi chromosome linear, complete sequenceprotein-export membrane protein9e-22104
NC_010571:4483500:4505305450530545078542550Opitutus terrae PB90-1, complete genomeprotein-export membrane protein SecD8e-22104
NC_020409:512861:5278205278205288811062Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeProtein-export membrane protein SecF2e-21103
NC_009455:273519:319927319927320832906Dehalococcoides sp. BAV1 chromosome, complete genomepreprotein translocase subunit SecF5e-21102
NC_008789:1837493:185138018513801852342963Halorhodospira halophila SL1, complete genomeprotein-export membrane protein SecF6e-21101
NC_011146:603429:611304611304612245942Geobacter bemidjiensis Bem, complete genomeprotein-export membrane protein SecF8e-21100
NC_013062:627000:6720266720266749412916Flavobacteriaceae bacterium 3519-10, complete genomeProtein-export membrane protein secD/ Protein-export membrane protein secF2e-2099.8
NC_002935:1378566:1389519138951913906311113Corynebacterium diphtheriae NCTC 13129, complete genomeprotein export protein SecF6e-2098.2
NC_016787:1350676:1356938135693813580501113Corynebacterium diphtheriae HC03 chromosome, complete genomepreprotein translocase subunit SecF6e-2098.2
NC_016790:1319060:1333006133300613341181113Corynebacterium diphtheriae VA01 chromosome, complete genomepreprotein translocase subunit SecF6e-2098.2
NC_013174:1459730:1462763146276314638631101Jonesia denitrificans DSM 20603, complete genomeprotein-export membrane protein SecF5e-2098.2
NC_016782:1359000:1363862136386213649741113Corynebacterium diphtheriae 241 chromosome, complete genomepreprotein translocase subunit SecF8e-2097.8
NC_016783:1374464:1386040138604013871521113Corynebacterium diphtheriae INCA 402 chromosome, complete genomepreprotein translocase subunit SecF8e-2097.8
NC_016786:1359064:1363832136383213649441113Corynebacterium diphtheriae HC01 chromosome, complete genomepreprotein translocase subunit SecF8e-2097.8
NC_016799:1343020:1417183141718314182951113Corynebacterium diphtheriae 31A chromosome, complete genomepreprotein translocase subunit SecF8e-2097.8
NC_016800:1378728:1390324139032413914361113Corynebacterium diphtheriae BH8 chromosome, complete genomepreprotein translocase subunit SecF8e-2097.8
NC_016802:1317365:1362652136265213637641113Corynebacterium diphtheriae HC02 chromosome, complete genomepreprotein translocase subunit SecF8e-2097.8
NC_016788:1349500:1360442136044213615541113Corynebacterium diphtheriae HC04 chromosome, complete genomepreprotein translocase subunit SecF2e-1997.1
NC_016785:1321700:1343344134334413444561113Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomepreprotein translocase subunit SecF2e-1997.1
NC_016789:1334514:1407540140754014086521113Corynebacterium diphtheriae PW8 chromosome, complete genomepreprotein translocase subunit SecF3e-1995.9
NC_016801:1361597:1406860140686014079721113Corynebacterium diphtheriae C7 (beta) chromosome, complete genomepreprotein translocase subunit SecF3e-1995.9
NC_007799:81723:849428494285823882Ehrlichia chaffeensis str. Arkansas, complete genomeprotein-export membrane protein SecF4e-1995.1
NC_007508:3034718:304807530480753049043969Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeprotein export protein SecF1e-1893.6
NC_017271:2789667:280419728041972805165969Xanthomonas campestris pv. raphani 756C chromosome, completeprotein-export membrane protein SecF2e-1893.2
NC_017305:1258840:1280652128065212817731122Corynebacterium pseudotuberculosis PAT10 chromosome, completeProtein-export membrane protein secF2e-1790.1
NC_017303:1261311:1283123128312312842441122Corynebacterium pseudotuberculosis I19 chromosome, complete genomeProtein-export membrane protein secF2e-1790.1
NC_017301:1261167:1282980128298012841011122Corynebacterium pseudotuberculosis C231 chromosome, completeProtein-export membrane protein secF2e-1790.1
NC_017031:1261289:1283101128310112842221122Corynebacterium pseudotuberculosis P54B96 chromosome, completeProtein-export membrane protein secF2e-1790.1
NC_012667:703852:728470728470729372903Vibrio cholerae MJ-1236 chromosome 2, complete genomeprotein-export membrane protein SecF2e-1789.7
NC_016932:1246235:1268031126803112691521122Corynebacterium pseudotuberculosis 316 chromosome, complete genomeprotein-export membrane protein secF3e-1789.4
NC_017300:1258861:1280674128067412817951122Corynebacterium pseudotuberculosis 1002 chromosome, completeProtein-export membrane protein secF5e-1788.6
NC_016781:1261300:1283112128311212842331122Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeprotein-export membrane protein secF5e-1788.6
NC_014329:1261480:1283292128329212844131122Corynebacterium pseudotuberculosis FRC41 chromosome, completeprotein-export membrane protein5e-1788.6
NC_015500:987641:1015053101505310163001248Treponema brennaborense DSM 12168 chromosome, complete genomeprotein-export membrane protein SecF2e-1170.5
NC_012225:1575432:159131815913181592241924Brachyspira hyodysenteriae WA1, complete genomepreprotein translocase2e-0859.7
NC_017243:517684:519159519159520082924Brachyspira intermedia PWS/A chromosome, complete genomepreprotein translocase3e-0859.3
NC_012883:1603744:162225116222511623111861Thermococcus sibiricus MM 739, complete genomeProtein-export membrane protein SecF1e-0757
NC_009465:938378:9392899392899411361848Candidatus Vesicomyosocius okutanii HA, complete genomepreprotein translocase SecD subunit6e-0755.1
NC_015581:1133775:1134831113483111367141884Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeprotein-export membrane protein SecD5e-0652