Pre_GI: BLASTP Hits

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Query: NC_014328:3066628:3073723 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 3073723, End: 3074046, Length: 324

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010520:1427981:143821914382191438539321Clostridium botulinum A3 str. Loch Maree, complete genomethioredoxin family protein8e-47185
NC_010516:1382000:139169013916901392010321Clostridium botulinum B1 str. Okra, complete genomethioredoxin family protein1e-46184
NC_009699:1400000:140949814094981409818321Clostridium botulinum F str. Langeland chromosome, complete genomethioredoxin family protein1e-46184
NC_009698:1337383:134509413450941345414321Clostridium botulinum A str. Hall chromosome, complete genomethioredoxin family protein4e-46183
NC_009697:1336889:134460013446001344920321Clostridium botulinum A str. ATCC 19397 chromosome, completethioredoxin family protein4e-46183
NC_009495:1368000:137598013759801376300321Clostridium botulinum A str. ATCC 3502 chromosome, complete genomethioredoxin family protein4e-46183
NC_012563:1464000:147377614737761474096321Clostridium botulinum A2 str. Kyoto, complete genomethioredoxin family protein4e-46183
NC_014328:2990790:301930630193063019629324Clostridium ljungdahlii ATCC 49587 chromosome, complete genomethioredoxin4e-46182
NC_017297:1402349:140979014097901410119330Clostridium botulinum F str. 230613 chromosome, complete genomethioredoxin family protein4e-42169
NC_016584:2244966:225197422519742252291318Desulfosporosinus orientis DSM 765 chromosome, complete genomethioredoxin domain-containing protein2e-37154
NC_014614:1259236:126330412633041263621318Clostridium sticklandii, complete genomeThioredoxin (Trx)5e-36149
NC_017179:2539031:256206225620622562379318Clostridium difficile BI1, complete genomethioredoxin2e-35147
NC_013315:2531019:255405025540502554367318Clostridium difficile CD196 chromosome, complete genomethioredoxin2e-35147
NC_013316:2623199:263460626346062634923318Clostridium difficile R20291, complete genomethioredoxin2e-35147
NC_014150:3139852:315535731553573155674318Brachyspira murdochii DSM 12563 chromosome, complete genomeThioredoxin domain protein1e-27121
NC_010718:497222:499986499986500303318Natranaerobius thermophilus JW/NM-WN-LF, complete genomeThioredoxin domain2e-26117
NC_019978:2189394:219591521959152196232318Halobacteroides halobius DSM 5150, complete genomethioredoxin domain-containing protein1e-23108
NC_015499:1403447:141993914199391420250312Thermodesulfobium narugense DSM 14796 chromosome, complete genomethioredoxin5e-1579.7
NC_014210:5752651:576142057614205761743324Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,thioredoxin3e-1477
NC_014221:169996:174418174418174750333Truepera radiovictrix DSM 17093 chromosome, complete genomethioredoxin9e-1475.5
NC_004557:2711702:271263827126382712955318Clostridium tetani E88, complete genomethioredoxin4e-1373.6
NC_007164:2446879:245284724528472453170324Corynebacterium jeikeium K411, complete genomethioredoxin9e-1372.4
NC_010475:1671823:169399816939981694321324Synechococcus sp. PCC 7002, complete genomethioredoxin1e-1271.6
NC_015681:1201926:121996412199641220287324Thermodesulfatator indicus DSM 15286 chromosome, complete genomethioredoxin2e-1271.6
NC_020409:329915:338253338253338573321Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeThioredoxin-12e-1271.2
NC_009850:1862602:188315818831581883475318Arcobacter butzleri RM4018, complete genomethioredoxin6e-1269.7
NC_007644:1694879:171051817105181710847330Moorella thermoacetica ATCC 39073, complete genomethioredoxin7e-1269.3
NC_010723:3133302:314867031486703148981312Clostridium botulinum E3 str. Alaska E43, complete genomethioredoxin8e-1268.9
NC_015573:1979202:199762919976291997946318Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomethioredoxin1e-1168.9
NC_009925:4864367:487975748797574880080324Acaryochloris marina MBIC11017, complete genomethioredoxin2e-1168.2
NC_020291:5752099:576770257677025768010309Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomethioredoxin TrxA2e-1167.8
NC_010793:30488:391713917139497327Orientia tsutsugamushi str. Ikeda, complete genomethioredoxin4e-1167
NC_011026:2269986:227686222768622277188327Chloroherpeton thalassium ATCC 35110, complete genomethioredoxin4e-1166.6
NC_015556:515641:536731536731537057327Pseudomonas fulva 12-X chromosome, complete genomethioredoxin4e-1166.6
NC_011899:1926000:193431819343181934638321Halothermothrix orenii H 168, complete genomethioredoxin5e-1166.2
NC_014973:4630132:466032346603234660652330Geobacter sp. M18 chromosome, complete genomethioredoxin7e-1165.9
NC_015873:790961:806686806686807006321Megasphaera elsdenii DSM 20460, complete genomethioredoxin8e-1165.9
NC_015590:298063:306845306845307213369Sinorhizobium meliloti AK83 chromosome 1, complete sequencethioredoxin domain-containing protein8e-1165.9
NC_015222:1607757:163141016314101631736327Nitrosomonas sp. AL212 chromosome, complete genomethioredoxin8e-1165.9
NC_011894:3988500:400935740093574009680324Methylobacterium nodulans ORS 2060, complete genomethioredoxin9e-1165.5
NC_014654:422013:440049440049440369321Halanaerobium sp. 'sapolanicus' chromosome, complete genomethioredoxin1e-1065.1
NC_011894:5056901:508773850877385088061324Methylobacterium nodulans ORS 2060, complete genomethioredoxin1e-1065.1
NC_017325:1488841:149519514951951495557363Sinorhizobium meliloti SM11 chromosome, complete genomeputative thioredoxin protein1e-1065.1
NC_017325:1897500:190355219035521903914363Sinorhizobium meliloti SM11 chromosome, complete genomeputative thioredoxin protein1e-1065.1
NC_008578:2431074:243217524321752432501327Acidothermus cellulolyticus 11B, complete genomethioredoxin2e-1064.7
NC_008820:808886:826442826442826765324Prochlorococcus marinus str. MIT 9303, complete genomeThioredoxin2e-1064.3
NC_012026:75812:768167681677163348Anaplasma marginale str. Florida, complete genomethioredoxin (trxA)3e-1063.9
NC_007354:1087456:110654311065431106875333Ehrlichia canis str. Jake, complete genomeThioredoxin3e-1063.9
NC_004842:62000:774197741977766348Anaplasma marginale str. St. Maries, complete genomethioredoxin3e-1063.9
NC_017093:8757291:875826787582678758584318Actinoplanes missouriensis 431, complete genomeputative thioredoxin4e-1063.5
NC_013501:176073:194886194886195233348Rhodothermus marinus DSM 4252, complete genomethioredoxin4e-1063.5
NC_007799:186000:205658205658205981324Ehrlichia chaffeensis str. Arkansas, complete genomethioredoxin5e-1063.2
NC_008702:1094663:110816211081621108488327Azoarcus sp. BH72, complete genomethioredoxin-disulfide reductase5e-1063.2
NC_007626:4688777:469237346923734692729357Magnetospirillum magneticum AMB-1, complete genomeThiol-disulfide isomerase and thioredoxins5e-1063.2
NC_015564:4727630:473037047303704730690321Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomethioredoxin9e-1062.4
NC_013173:1231213:124439012443901244710321Desulfomicrobium baculatum DSM 4028, complete genomethioredoxin9e-1062.4
NC_011126:555483:555160555160555486327Hydrogenobaculum sp. Y04AAS1, complete genomethioredoxin1e-0962
NC_015759:726612:738847738847739161315Weissella koreensis KACC 15510 chromosome, complete genomethioredoxin1e-0962
NC_009665:4675289:469803446980344698360327Shewanella baltica OS185 chromosome, complete genomethioredoxin2e-0961.2
NC_002976:707827:727476727476727790315Staphylococcus epidermidis RP62A, complete genomethioredoxin2e-0961.2
NC_004461:813748:833409833409833723315Staphylococcus epidermidis ATCC 12228, complete genomethioredoxin2e-0961.2
NC_014540:2908912:2920031292003129212571227Burkholderia sp. CCGE1003 chromosome 2, complete sequencethioredoxin2e-0961.2
NC_012673:2535427:258217825821782582492315Exiguobacterium sp. AT1b, complete genomethioredoxin3e-0960.8
NC_009464:1804791:182452218245221824857336Uncultured methanogenic archaeon RC-I, complete genomethioredoxin2e-0960.8
NC_020291:1149887:117097411709741171285312Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomethioredoxin TrxA2e-0960.8
NC_009464:1804791:182493318249331825274342Uncultured methanogenic archaeon RC-I, complete genomethioredoxin2e-0960.8
NC_014328:4387303:440454044045404404857318Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative thioredoxin3e-0960.5
NC_014151:4021394:403812340381234038446324Cellulomonas flavigena DSM 20109 chromosome, complete genomethioredoxin4e-0960.1
NC_008148:2290806:230989923098992310210312Rubrobacter xylanophilus DSM 9941, complete genomethioredoxin4e-0960.1
NC_007333:3626510:363557936355793635902324Thermobifida fusca YX, complete genomethioredoxin4e-0960.1
NC_015953:3684065:370046137004613700793333Streptomyces sp. SirexAA-E chromosome, complete genomethioredoxin5e-0960.1
NC_013929:5135285:514916551491655149497333Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin5e-0959.7
NC_011830:3786173:380730038073003807629330Desulfitobacterium hafniense DCB-2, complete genomethioredoxin5e-0959.7
NC_013929:2696648:270306927030692703395327Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin7e-0959.3
NC_003888:4251867:428021242802124280544333Streptomyces coelicolor A3(2), complete genomethioredoxin9e-0958.9
NC_014828:107802:131356131356131679324Ethanoligenens harbinense YUAN-3 chromosome, complete genomethioredoxin1e-0858.9
NC_017030:7557295:757744875774487577774327Corallococcus coralloides DSM 2259 chromosome, complete genomethioredoxin1e-0858.5
NC_008390:2156188:217406821740682174397330Burkholderia cepacia AMMD chromosome 1, complete sequencethioredoxin1e-0858.5
NC_016114:3655005:367608836760883676423336Streptomyces flavogriseus ATCC 33331 chromosome, complete genomethioredoxin2e-0858.2
NC_008261:2920999:293669729366972937011315Clostridium perfringens ATCC 13124, complete genomethioredoxin1e-0858.2
NC_009952:3596399:362359736235973623917321Dinoroseobacter shibae DFL 12, complete genomethioredoxin3e-0857.4
NC_013521:4240468:424347642434764243817342Sanguibacter keddieii DSM 10542, complete genomethioredoxin4e-0857
NC_010519:275976:299712299712300035324Haemophilus somnus 2336 chromosome, complete genomethioredoxin4e-0856.6
NC_013009:809681:818107818107818415309Neorickettsia risticii str. Illinois, complete genomethioredoxin4e-0856.6
NC_002677:3253057:3258250325825032596261377Mycobacterium leprae TN, complete genomebifunctional thioredoxin reductase/thioredoxin7e-0856.2
NC_011896:3252925:3258118325811832594941377Mycobacterium leprae Br4923, complete genomebifunctional thioredoxin reductase/thioredoxin7e-0856.2
NC_014960:1670778:168546616854661685819354Anaerolinea thermophila UNI-1, complete genomethioredoxin6e-0856.2
NC_014210:144036:146933146933147280348Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,thioredoxin6e-0856.2
NC_014151:4106624:410959241095924109924333Cellulomonas flavigena DSM 20109 chromosome, complete genomethioredoxin5e-0856.2
NC_017059:967309:967309967309968235927Rhodospirillum photometricum DSM 122, complete genomeThioredoxin-related5e-0856.2
NC_018515:989616:993165993165993494330Desulfosporosinus meridiei DSM 13257 chromosome, complete genomethioredoxin1e-0755.5
NC_018750:3964784:398081139808113981134324Streptomyces venezuelae ATCC 10712, complete genomeThioredoxin2e-0754.7
NC_012522:7837071:784619778461977846568372Rhodococcus opacus B4, complete genomethioredoxin3e-0753.9
NC_012115:1415827:142686214268621427182321Nautilia profundicola AmH, complete genomethioredoxin3e-0753.9
NC_011026:3009500:301487330148733015193321Chloroherpeton thalassium ATCC 35110, complete genomethioredoxin3e-0753.9
NC_017275:1635959:166325316632531663654402Sulfolobus islandicus HVE10/4 chromosome, complete genomethioredoxin3e-0753.5
NC_013769:1705500:173220517322051732606402Sulfolobus islandicus L.D.8.5 chromosome, complete genomethioredoxin3e-0753.5
NC_012726:1611936:163917216391721639573402Sulfolobus islandicus M.16.4 chromosome, complete genomethioredoxin3e-0753.5
NC_015320:160792:177193177193177513321Archaeoglobus veneficus SNP6 chromosome, complete genomethioredoxin4e-0753.5
CP002185:2889656:288965628896562890075420Escherichia coli W, complete genomethioredoxin 26e-0753.1
CP002516:1196000:121578112157811216200420Escherichia coli KO11, complete genomethioredoxin6e-0753.1
CU928160:2785792:278579227857922786211420Escherichia coli IAI1 chromosome, complete genomethioredoxin 26e-0753.1
NC_008711:4579997:458497445849744585300327Arthrobacter aurescens TC1, complete genome5e-0753.1
NC_018531:4718904:472392747239274724253327Arthrobacter sp. Rue61a chromosome, complete genomethioredoxin TrxA5e-0753.1
NC_007512:865500:868511868511868816306Pelodictyon luteolum DSM 273, complete genomeThioredoxin9e-0752.4
NC_014910:4316706:431767643176764318584909Alicycliphilus denitrificans BC chromosome, complete genomethioredoxin9e-0752.4
NC_015977:442493:466930466930467247318Roseburia hominis A2-183 chromosome, complete genomethiol-disulfide isomerase and thioredoxin9e-0752.4
NC_009256:2945059:294505929450592945904846Burkholderia vietnamiensis G4 chromosome 1, complete sequencethioredoxin9e-0752.4
NC_009465:938378:943888943888944310423Candidatus Vesicomyosocius okutanii HA, complete genomethioredoxin9e-0752.4
NC_006905:2805877:280587728058772806296420Salmonella enterica subsp. enterica serovar Choleraesuis strthioredoxin 2, redox factor9e-0752.4
NC_010102:283364:302564302564302983420Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-0752.4
NC_011080:2789744:279098527909852791404420Salmonella enterica subsp. enterica serovar Newport str. SL254,putative thioredoxin9e-0752.4
NC_011149:2701916:270191627019162702335420Salmonella enterica subsp. enterica serovar Agona str. SL483,putative thioredoxin9e-0752.4
NC_009664:1434974:143980414398041440253450Kineococcus radiotolerans SRS30216, complete genomethioredoxin1e-0652
NC_011884:1998559:201983120198312020169339Cyanothece sp. PCC 7425, complete genomeThioredoxin domain protein1e-0651.6
NC_008528:331260:342289342289342609321Oenococcus oeni PSU-1, complete genomeThiol-disulfide isomerase and thioredoxin1e-0651.6
NC_008571:3165143:318375931837593184076318Gramella forsetii KT0803, complete genomethioredoxin2e-0651.2
NC_013170:1020339:102392210239221024230309Cryptobacterium curtum DSM 15641, complete genomethioredoxin2e-0650.8
NC_006448:1604627:160650116065011606815315Streptococcus thermophilus LMG 18311, complete genomethioredoxin4e-0650.1
NC_006449:1606948:160882216088221609136315Streptococcus thermophilus CNRZ1066, complete genomethioredoxin4e-0650.1
NC_011059:921690:942818942818943132315Prosthecochloris aestuarii DSM 271, complete genomeThioredoxin domain4e-0650.1
NC_003198:2703013:270425427042542704673420Salmonella enterica subsp. enterica serovar Typhi str. CT18,thioredoxin 24e-0650.1
NC_004631:283289:300176300176300595420Salmonella enterica subsp. enterica serovar Typhi Ty2, completethioredoxin 24e-0650.1
NC_014215:1929000:194297019429701943395426Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Thioredoxin5e-0649.7
NC_015760:2009425:201342720134272013741315Streptococcus salivarius CCHSS3, complete genomethiol-disulfide isomerase and thioredoxins7e-0649.3