Pre_GI: BLASTP Hits

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Query: NC_014328:1379437:1390029 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 1390029, End: 1390517, Length: 489

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010520:2635750:264210826421082642602495Clostridium botulinum A3 str. Loch Maree, complete genome16S rRNA processing protein RimM2e-52204
NC_009698:2420484:242345724234572423951495Clostridium botulinum A str. Hall chromosome, complete genome16S rRNA-processing protein RimM3e-52203
NC_009495:2571732:257909025790902579584495Clostridium botulinum A str. ATCC 3502 chromosome, complete genome16S rRNA-processing protein RimM5e-52202
NC_020291:1437431:144814214481421448639498Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeribosome maturation factor RimM5e-44176
NC_015873:1193843:119618511961851196688504Megasphaera elsdenii DSM 20460, complete genomeribosome maturation factor rimM1e-25115
NC_018664:1699618:169961816996181700115498Clostridium acidurici 9a chromosome, complete genome16S rRNA processing protein RimM2e-24111
NC_013216:1219775:121977512197751220296522Desulfotomaculum acetoxidans DSM 771, complete genome16S rRNA processing protein RimM1e-21102
NC_014654:1529500:153577615357761536297522Halanaerobium sp. 'sapolanicus' chromosome, complete genome16S rRNA processing protein RimM2e-1994.7
NC_014624:2668157:267255526725552673070516Eubacterium limosum KIST612 chromosome, complete genomeRimM protein3e-1994.4
NC_020164:1590221:159678215967821597285504Staphylococcus warneri SG1, complete genome16S rRNA-processing protein RimM1e-1892.4
NC_016584:4860360:487999748799974880494498Desulfosporosinus orientis DSM 765 chromosome, complete genome16S rRNA processing protein RimM2e-1892
NC_006274:3736703:373792837379283738443516Bacillus cereus E33L, complete genome16S rRNA-processing protein1e-1789
NC_011725:3862094:386209438620943862609516Bacillus cereus B4264 chromosome, complete genome16S rRNA-processing protein RimM1e-1789
NC_014171:3726054:374135437413543741869516Bacillus thuringiensis BMB171 chromosome, complete genome16S rRNA-processing protein1e-1789
NC_017208:3816753:385748738574873858002516Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete16S rRNA-processing protein2e-1788.6
NC_011772:3821917:382781238278123828327516Bacillus cereus G9842, complete genome16S rRNA processing protein RimM2e-1788.6
NC_010382:1607013:162188916218891622404516Lysinibacillus sphaericus C3-41, complete genome16S rRNA-processing protein3e-1787.8
NC_010184:3713359:371614737161473716662516Bacillus weihenstephanensis KBAB4, complete genome16S rRNA processing protein RimM3e-1787.8
NC_003909:3606177:363277136327713633286516Bacillus cereus ATCC 10987, complete genome16S rRNA-processing protein6e-1786.7
NC_012659:3617000:365740036574003657915516Bacillus anthracis str. A0248, complete genome16S rRNA-processing protein RimM6e-1786.7
NC_012581:559182:580672580672581187516Bacillus anthracis str. CDC 684 chromosome, complete genome16S rRNA-processing protein RimM6e-1786.7
NC_007530:3616828:365750036575003658015516Bacillus anthracis str. 'Ames Ancestor', complete genome16S rRNA-processing protein6e-1786.7
NC_003997:3617000:365737336573733657888516Bacillus anthracis str. Ames, complete genome16S rRNA-processing protein6e-1786.7
NC_014335:3589726:360822736082273608742516Bacillus cereus biovar anthracis str. CI chromosome, complete16S rRNA-processing protein6e-1786.7
NC_005945:3636321:365806836580683658583516Bacillus anthracis str. Sterne, complete genome16S rRNA-processing protein6e-1786.7
NC_005957:3665657:367904636790463679561516Bacillus thuringiensis serovar konkukian str. 97-27, complete16S rRNA-processing protein6e-1786.7
NC_011658:3603009:364541836454183645933516Bacillus cereus AH187 chromosome, complete genome16S rRNA-processing protein RimM6e-1786.7
NC_011969:3575988:358937935893793589894516Bacillus cereus Q1 chromosome, complete genome16S rRNA-processing protein rimm6e-1786.7
NC_016779:3621973:362270736227073623222516Bacillus cereus F837/76 chromosome, complete genome16S rRNA processing protein RimM6e-1786.7
NC_017200:3701043:370177737017773702292516Bacillus thuringiensis serovar finitimus YBT-020 chromosome,16S rRNA-processing protein RimM6e-1786.7
NC_008600:3686135:368686936868693687450582Bacillus thuringiensis str. Al Hakam, complete genome16S rRNA processing protein6e-1786.7
UCMB5137:1159520:117395711739571174481525Bacillus atrophaeus UCMB-513716S rRNA-processing protein RimM9e-1785.9
NC_009848:1542978:155513015551301555654525Bacillus pumilus SAFR-032, complete genome16S rRNA processing protein3e-1684.3
NC_011297:1357947:136204113620411362541501Dictyoglomus thermophilum H-6-12, complete genome16S rRNA processing protein RimM4e-1684
NC_011661:1542335:154643015464301546930501Dictyoglomus turgidum DSM 6724, complete genome16S rRNA processing protein RimM4e-1684
NC_014960:1735786:179166717916671792230564Anaerolinea thermophila UNI-1, complete genomeputative 16S rRNA-processing protein RimM4e-1684
NC_010610:1385066:141026714102671410776510Lactobacillus fermentum IFO 3956, complete genome16S rRNA processing protein RimM6e-1580.1
NC_014483:1973233:198132319813231981838516Paenibacillus polymyxa E681 chromosome, complete genomeProbable 16S rRNA processing protein rimM1e-1479
NC_007947:2447635:248869224886922489186495Methylobacillus flagellatus KT, complete genome16S rRNA processing protein RimM5e-1476.6
NC_016605:1033000:103613110361311036640510Pediococcus claussenii ATCC BAA-344 chromosome, complete genome16S rRNA processing protein RimM6e-1476.6
NC_006570:141966:167900167900168409510Francisella tularensis subsp. tularensis Schu 4, complete genome16S rRNA processing protein rimM8e-1476.3
NC_008245:141982:167916167916168425510Francisella tularensis subsp. tularensis FSC 198, complete genome16S rRNA processing protein rimM8e-1476.3
NC_016933:141984:167918167918168427510Francisella tularensis TIGB03 chromosome, complete genome16S rRNA processing protein RimM8e-1476.3
NC_016937:141984:167918167918168427510Francisella tularensis subsp. tularensis TI0902 chromosome,16S rRNA processing protein RimM8e-1476.3
NC_007880:1667922:166792216679221668431510Francisella tularensis subsp. holarctica, complete genome16S rRNA processing protein rimM1e-1375.9
NC_009749:1663500:166368816636881664197510Francisella tularensis subsp. holarctica FTA, complete genome16S rRNA processing protein RimM1e-1375.9
NC_008369:1667437:166743716674371667946510Francisella tularensis subsp. holarctica OSU18, complete genome16S rRNA processing protein RimM1e-1375.9
NC_010677:214712:240519240519241028510Francisella tularensis subsp. mediasiatica FSC147, complete genome16S rRNA processing protein RimM2e-1375.1
NC_008601:1658454:165845416584541658963510Francisella tularensis subsp. novicida U112, complete genome16S rRNA processing protein RimM3e-1374.3
NC_015391:1013608:102841710284171028932516Carnobacterium sp. 17-4 chromosome, complete genome16S rRNA-processing protein RimM4e-1373.9
NC_015672:2071141:209014720901472090689543Flexistipes sinusarabici DSM 4947 chromosome, complete genomeribosome maturation factor rimM4e-1373.6
NC_009257:226417:252351252351252860510Francisella tularensis subsp. tularensis WY96-3418 chromosome,16S rRNA-processing protein RimM1e-1272.4
NC_012969:2476318:251996125199612520455495Methylovorus glucosetrophus SIP3-4 chromosome, complete genome16S rRNA processing protein RimM2e-1271.6
NC_010336:1117325:114393411439341144443510Francisella philomiragia subsp. philomiragia ATCC 25017, complete16S rRNA processing protein RimM3e-1270.9
NC_014733:2363838:238886023888602389345486Methylovorus sp. MP688 chromosome, complete genome16S rRNA processing protein rimm4e-1270.5
NC_010003:335348:345978345978346535558Petrotoga mobilis SJ95, complete genome16S rRNA processing protein RimM6e-1270.1
NC_003112:603879:622365622365622874510Neisseria meningitidis MC58, complete genome16S rRNA-processing protein6e-1270.1
NC_017501:1750580:175331217533121753821510Neisseria meningitidis 8013, complete genomeputative 16S rRNA processing protein RimM6e-1270.1
NC_017515:1653306:166885016688501669359510Neisseria meningitidis M04-240196 chromosome, complete genome16S rRNA processing protein RimM6e-1269.7
NC_014012:1097938:112116811211681121701534Shewanella violacea DSS12, complete genome16S rRNA processing protein RimM7e-1269.7
NC_013016:500789:520602520602521111510Neisseria meningitidis alpha14 chromosome, complete genome16S rRNA-processing protein RimM1e-1169.3
NC_008767:549351:565156565156565665510Neisseria meningitidis FAM18, complete genomeputative 16S rRNA processing protein1e-1168.6
NC_017514:1640355:164035516403551640837483Neisseria meningitidis M01-240149 chromosome, complete genome16S rRNA processing protein RimM2e-1168.2
NC_011884:5019500:505344750534475053989543Cyanothece sp. PCC 7425, complete genome16S rRNA processing protein RimM3e-1167.8
NC_017513:548882:567963567963568445483Neisseria meningitidis G2136 chromosome, complete genome16S rRNA processing protein RimM3e-1167.8
NC_017517:635235:652856652856653338483Neisseria meningitidis M01-240355 chromosome, complete genome16S rRNA processing protein RimM3e-1167.8
NC_017518:672790:694289694289694798510Neisseria meningitidis NZ-05/33 chromosome, complete genome16S rRNA processing protein RimM2e-1167.8
NC_011740:448000:469311469311469859549Escherichia fergusonii ATCC 35469, complete genome16S rRNA processing protein4e-1167.4
CP002516:1165726:118900611890061189554549Escherichia coli KO11, complete genome16S rRNA processing protein RimM3e-1167.4
NC_012947:1106000:112747211274721128020549Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete16S rRNA-processing protein RimM3e-1167.4
NC_016902:1165726:118900611890061189554549Escherichia coli KO11FL chromosome, complete genome16S rRNA processing protein RimM3e-1167.4
NC_020064:871338:875490875490876038549Serratia marcescens FGI94, complete genome16S rRNA processing protein RimM1e-1065.5
NC_003911:3453764:345528434552843455787504Silicibacter pomeroyi DSS-3, complete genome16S rRNA processing protein RimM3e-1064.3
NC_008312:7099417:711473871147387115364627Trichodesmium erythraeum IMS101, complete genome16S rRNA processing protein RimM6e-1063.5
NC_007645:1785000:179738317973831797904522Hahella chejuensis KCTC 2396, complete genome16S rRNA processing protein RimM5e-1063.5
NC_011773:3689473:369226236922623692582321Bacillus cereus AH820 chromosome, complete genome16S rRNA processing protein RimM1e-0962.4
NC_007516:124486:128246128246128779534Synechococcus sp. CC9605, complete genome16S rRNA-processing protein2e-0961.2
NC_015064:2494000:249533124953312495939609Acidobacterium sp. MP5ACTX9 chromosome, complete genome16S rRNA processing protein RimM3e-0960.8
NC_012438:132456:148745148745149251507Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genome16S rRNA processing protein RimM3e-0960.8
NC_016633:541559:543291543291543797507Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome16S rRNA processing protein RimM5e-0960.5
NC_012115:1415827:141648314164831417004522Nautilia profundicola AmH, complete genome16S rRNA processing protein RimM6e-0960.1
NC_008319:171847:204839204839205402564Synechococcus sp. CC9311, complete genome16S rRNA processing protein RimM1e-0755.8
NC_010995:1648897:166796716679671668503537Cellvibrio japonicus Ueda107, complete genome16S rRNA processing protein RimM2e-0754.7
NC_016109:5768000:576816657681665768798633Kitasatospora setae KM-6054, complete genome16S rRNA processing protein RimM4e-0753.9
NC_004663:2509433:252072825207282521267540Bacteroides thetaiotaomicron VPI-5482, complete genome16S rRNA-processing protein6e-0753.5
NC_011565:620801:649820649820650335516Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,16S rRNA-processing protein RimM1e-0652
NC_009091:1514770:151968515196851520224540Prochlorococcus marinus str. MIT 9301, complete genomepossible 16S rRNA processing protein RimM2e-0651.6
NC_016845:4077293:408640440864044086862459Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,16S rRNA-processing protein2e-0651.6
NC_010572:2216309:223572222357222236318597Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative 16S rRNA processing protein5e-0650.4