Pre_GI: BLASTP Hits

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Query: NC_014328:1307490:1311121 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 1311121, End: 1311552, Length: 432

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:4066926:409174640917464092167422Methylobacterium nodulans ORS 2060, complete genome2e-2097.4
NC_009802:114749:115701115701116693993Campylobacter concisus 13826, complete genomeacetolactate synthase small subunit5e-1889.7
NC_014840:286767:311492311492312316825Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceFe-S cluster assembly protein NifU2e-33140
NC_013771:684966:693574693574694458885Cyanobacterium UCYN-A, complete genomeFe-S cluster assembly protein NifU1e-24111
NC_015850:761500:761654761654762058405Acidithiobacillus caldus SM-1 chromosome, complete genomeFe-S cluster formation/repair protein4e-36149
NC_017517:1377617:139320713932071393593387Neisseria meningitidis M01-240355 chromosome, complete genomeFeS cluster assembly scaffold IscU9e-35145
NC_014963:113015:137780137780138205426Terriglobus saanensis SP1PR4 chromosome, complete genomeFeS cluster assembly scaffold IscU8e-34142
NC_017516:917817:922909922909923295387Neisseria meningitidis H44/76 chromosome, complete genomeFeS cluster assembly scaffold IscU3e-35146
NC_007797:692944:696821696821697213393Anaplasma phagocytophilum HZ, complete genomeFeS cluster assembly scaffold IscU2e-31134
NC_008095:6253610:625361062536106254011402Myxococcus xanthus DK 1622, complete genomeFeS cluster assembly scaffold IscU2e-33140
NC_008576:3812500:382786738278673828259393Magnetococcus sp. MC-1, complete genomeFeS cluster assembly scaffold IscU9e-38155
NC_014721:1777644:179672517967251797108384Caldicellulosiruptor kristjanssonii 177R1B chromosome, completefes cluster assembly scaffold protein nifu3e-48190
NC_018515:989616:996984996984997361378Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeFeS cluster assembly scaffold protein NifU6e-47185
NC_014377:532816:550491550491550862372Thermosediminibacter oceani DSM 16646 chromosome, complete genomeFeS cluster assembly scaffold protein NifU3e-40163
NC_021182:2422226:243839124383912438822432Clostridium pasteurianum BC1, complete genomeFeS cluster assembly scaffold protein NifU3e-70263
NC_011830:3786173:380337538033753803749375Desulfitobacterium hafniense DCB-2, complete genomeFeS cluster assembly scaffold protein NifU4e-49192
NC_014720:1161841:116302811630281163411384Caldicellulosiruptor kronotskyensis 2002 chromosome, completefes cluster assembly scaffold protein nifu3e-48190
NC_014657:1518721:153826215382621538645384Caldicellulosiruptor owensensis OL chromosome, complete genomefes cluster assembly scaffold protein nifu9e-48188
NC_010718:304440:320661320661321074414Natranaerobius thermophilus JW/NM-WN-LF, complete genomeFeS cluster assembly scaffold protein NifU6e-37152
NC_014377:1089894:110513511051351105527393Thermosediminibacter oceani DSM 16646 chromosome, complete genomeFeS cluster assembly scaffold protein NifU7e-51198
NC_012034:1783912:180310418031041803487384Anaerocellum thermophilum DSM 6725, complete genomeFeS cluster assembly scaffold protein NifU3e-48190
NC_014652:1032711:105565710556571056040384Caldicellulosiruptor hydrothermalis 108 chromosome, completefes cluster assembly scaffold protein nifu3e-48190
NC_011832:1949717:195155419515541951991438Candidatus Methanosphaerula palustris E1-9c, complete genomeFeS cluster assembly scaffold protein NifU5e-56216
NC_014392:969498:990843990843991226384Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeFeS cluster assembly scaffold protein NifU1e-48191
NC_015949:1180755:119982111998211200204384Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeFeS cluster assembly scaffold protein NifU3e-48190
NC_019978:1816940:183294218329421833343402Halobacteroides halobius DSM 5150, complete genomeFeS cluster assembly scaffold protein NifU5e-45179
NC_016077:388941:403300403300403755456Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein1e-0755.5
NC_012559:2752825:276968627696862770075390Laribacter hongkongensis HLHK9, complete genomehypothetical protein4e-37152
NC_016641:4151403:416663441666344166807174Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein3e-0753.9
NC_009495:2685646:270474627047462705174429Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeiron-sulfur cluster assembly protein3e-63239
NC_009699:2733529:275270727527072753135429Clostridium botulinum F str. Langeland chromosome, complete genomeiron-sulfur cluster assembly protein7e-64241
NC_010546:553774:564649564649565530882Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceiron-sulfur cluster assembly protein1e-25115
NC_015391:448833:457117457117457581465Carnobacterium sp. 17-4 chromosome, complete genomeiron-sulfur cluster assembly scaffold protein7e-1682.8
NC_011772:4875893:488521648852164885647432Bacillus cereus G9842, complete genomeiron-sulfur cluster assembly scaffold SufA2e-1374.7
NC_015577:2203835:221854422185442219137594Treponema azotonutricium ZAS-9 chromosome, complete genomeIscU protein4e-28123
NC_015690:1109335:111419511141951114626432Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNifU1e-1582
NC_009437:2367842:238689723868972387280384Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeNifU domain-containing protein7e-49192
NC_009455:820821:822116822116822499384Dehalococcoides sp. BAV1 chromosome, complete genomeNifU domain-containing protein4e-28123
NC_017303:1172656:118509911850991185548450Corynebacterium pseudotuberculosis I19 chromosome, complete genomeNifU family protein1e-0652
NC_016935:1636278:164224616422461642677432Paenibacillus mucilaginosus 3016 chromosome, complete genomeNifU family protein1e-1582
NC_017031:1172644:118515411851541185534381Corynebacterium pseudotuberculosis P54B96 chromosome, completeNifU family protein7e-0649.3
NC_016932:1157587:117002811700281170477450Corynebacterium pseudotuberculosis 316 chromosome, complete genomeNifU family protein7e-0855.8
NC_016781:1169632:118522811852281185677450Corynebacterium pseudotuberculosis 3/99-5 chromosome, completenifU family protein1e-0652
NC_009715:167513:190638190638191630993Campylobacter curvus 525.92 chromosome, complete genomeNifU family protein6e-1992.8
NC_011969:4655602:466636046663604666791432Bacillus cereus Q1 chromosome, complete genomenifu family protein3e-1373.9
NC_017301:1172660:118509611850961185545450Corynebacterium pseudotuberculosis C231 chromosome, completeNifU family protein1e-0652
NC_017154:2901300:292375729237572924143387Yersinia pestis D106004 chromosome, complete genomeNifU family protein8e-33139
NC_016605:233087:242168242168242617450Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeNifU family SUF system FeS assembly protein6e-0959.7
NC_020995:477765:480324480324480818495Enterococcus casseliflavus EC20, complete genomeNifU family SUF system FeS assembly protein1e-1478.6
NC_008262:1950205:195312119531211953555435Clostridium perfringens SM101, complete genomenifU protein4e-67252
NC_008593:1461771:147521014752101475638429Clostridium novyi NT, complete genomenifU protein7e-66248
NC_003454:677699:695293695293695679387Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNifU protein7e-36149
NC_018870:2316499:237224323722432372653411Thermacetogenium phaeum DSM 12270 chromosome, complete genomeNifU-like Fe-S cluster assembly protein2e-29127
NC_013790:2030960:203401020340102034384375Methanobrevibacter ruminantium M1 chromosome, complete genomeNifU-like FeS cluster assembly scaffold protein4e-42169
NC_010162:10208521:102240411022404110224490450Sorangium cellulosum 'So ce 56', complete genomeNifU-like protein5e-33139
NC_003116:1488576:150284915028491503235387Neisseria meningitidis Z2491, complete genomeNifU-like protein9e-35145
NC_014329:1169674:118527011852701185719450Corynebacterium pseudotuberculosis FRC41 chromosome, completenifU-like protein involved in Fe-S cluster formation1e-0652
NC_002570:388000:397887397887398336450Bacillus halodurans C-125, complete genomenitrogen fixation protein2e-0961.2
NC_020409:393329:418015418015418866852Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeNitrogen fixation protein nifU2e-29127
NC_017190:3166000:318204631820463182489444Bacillus amyloliquefaciens LL3 chromosome, complete genomenitrogen fixation protein NifU-like protein3e-1477
NC_014935:711765:754261754261754740480Nitratifractor saLSUginis DSM 16511 chromosome, complete genomenitrogen-fixing nifu domain protein1e-0962
NC_011899:948790:957256957256957672417Halothermothrix orenii H 168, complete genomenitrogen-fixing NifU domain protein7e-45178
NC_014376:2921769:294574129457412946142402Clostridium saccharolyticum WM1 chromosome, complete genomenitrogen-fixing NifU domain protein1e-32138
NC_008786:3323167:334054133405413340933393Verminephrobacter eiseniae EF01-2, complete genomenitrogen-fixing NifU domain protein2e-1167.8
NC_014376:2921769:294745529474552947838384Clostridium saccharolyticum WM1 chromosome, complete genomenitrogen-fixing NifU domain protein1e-33141
NC_011060:330437:350138350138350749612Pelodictyon phaeoclathratiforme BU-1, complete genomenitrogen-fixing NifU domain protein3e-26117
NC_015565:287900:329903329903330388486Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completenitrogen-fixing NifU domain-containing protein2e-28124
NC_003366:2057656:206381720638172064245429Clostridium perfringens str. 13, complete genomeprobable nitrogen fixation protein5e-67252
NC_016830:1182765:121438312143831214769387Pseudomonas fluorescens F113 chromosome, complete genomeprotein IscU4e-36149
NC_016048:1390463:139478113947811395155375Oscillibacter valericigenes Sjm18-20, complete genomeputative iron-sulfur cluster assembly protein9e-24108
NC_012522:7596039:763429176342917634791501Rhodococcus opacus B4, complete genomeputative iron-sulfur cluster assembly protein IscU4e-0650.1
NC_014925:578759:581326581326581775450Staphylococcus pseudintermedius HKU10-03 chromosome, completePutative iron-sulfur cluster assembly scaffold protein for SUF system, SufE24e-1373.6
NC_002946:618439:622457622457622843387Neisseria gonorrhoeae FA 1090, complete genomeputative NifU-like protein9e-35145
NC_017512:1264542:127881512788151279201387Neisseria meningitidis WUE 2594, complete genomeputative NifU-like protein9e-35145
NC_013016:1257942:127481712748171275203387Neisseria meningitidis alpha14 chromosome, complete genomescaffold protein9e-35145
NC_017505:1338661:135496813549681355354387Neisseria meningitidis alpha710 chromosome, complete genomescaffold protein9e-35145
NC_017511:950411:965537965537965923387Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomescaffold protein9e-35145
NC_011035:1033942:104974210497421050128387Neisseria gonorrhoeae NCCP11945 chromosome, complete genomescaffold protein9e-35145
NC_017341:903473:924327924327924791465Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,SUF system FeS assembly protein7e-1682.4
NC_013642:1425795:142579514257951426211417Thermotoga naphthophila RKU-10, complete genomeSUF system FeS assembly protein, NifU family4e-1270.1
NC_013192:519600:529664529664530104441Leptotrichia buccalis DSM 1135, complete genomeSUF system FeS assembly protein, NifU family2e-0754.7
NC_013922:1855000:185849718584971858928432Natrialba magadii ATCC 43099 chromosome, complete genomeSUF system FeS assembly protein, NifU family3e-1477
NC_010184:4763932:477346947734694773900432Bacillus weihenstephanensis KBAB4, complete genomeSUF system FeS assembly protein, NifU family4e-1373.2
NC_015387:1898496:190542619054261905854429Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeSUF system FeS assembly protein, NifU family2e-1890.9
NC_015389:1298689:132803113280311328453423Coriobacterium glomerans PW2 chromosome, complete genomeSUF system FeS assembly protein, NifU family2e-0857.4