Pre_GI: BLASTP Hits

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Query: NC_014328:1286407:1294881 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 1294881, End: 1295627, Length: 747

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014328:4316008:432415343241534324899747Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment shellprotein1e-92339
NC_004557:1553000:155794115579411558630690Clostridium tetani E88, complete genomecarbon dioxide concentrating mechanism protein ccmK homolog6e-22104
NC_010674:1496500:151249615124961513254759Clostridium botulinum B str. Eklund 17B, complete genomebacterial microcompartments family protein1e-21103
NC_009922:2556033:256607825660782566818741Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein1e-21103
NC_010723:1465097:148270914827091483467759Clostridium botulinum E3 str. Alaska E43, complete genomebacterial microcompartments family protein1e-21103
NC_012563:2384500:239304423930442393841798Clostridium botulinum A2 str. Kyoto, complete genomebacterial microcompartments family protein1e-20100
NC_009495:2244774:224964022496402250437798Clostridium botulinum A str. ATCC 3502 chromosome, complete genomepropanediol/ethanolamine utilization protein1e-20100
NC_009697:2173000:217828221782822179079798Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein1e-20100
NC_009698:2171151:217850121785012179298798Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein1e-20100
NC_012658:2295536:230715823071582307961804Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein1e-20100
NC_017297:2288000:229888722988872299771885Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein3e-2098.6
NC_009699:2287893:229877522987752299659885Clostridium botulinum F str. Langeland chromosome, complete genomecarbon dioxide concentrating mechanism protein CcmK-like protein3e-2098.6
NC_009633:3933941:394262139426213943220600Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein3e-1995.5
NC_010001:1745089:176367617636761764362687Clostridium phytofermentans ISDg, complete genomemicrocompartments protein5e-1891.7
NC_016584:5625975:563232356323235632955633Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein1e-1480.1
NC_017243:1813158:182421218242121824484273Brachyspira intermedia PWS/A chromosome, complete genomemicrocompartments protein1e-1479.7
NC_017243:1813158:182450918245091824781273Brachyspira intermedia PWS/A chromosome, complete genomemicrocompartments protein3e-1478.6
NC_017243:1813158:182387818238781824186309Brachyspira intermedia PWS/A chromosome, complete genomemicrocompartments protein1e-1376.6
NC_013192:63111:837278372784002276Leptotrichia buccalis DSM 1135, complete genomemicrocompartments protein6e-1374.7
NC_009698:2171151:217585421758542176144291Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein1e-1273.9
NC_009697:2173000:217563521756352175925291Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein1e-1273.9
NC_009495:2244774:224699322469932247283291Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemicrocompartments family protein1e-1273.9
NC_012563:2384500:239039723903972390687291Clostridium botulinum A2 str. Kyoto, complete genomebacterial microcompartments family protein1e-1273.9
NC_013192:63111:815288152881833306Leptotrichia buccalis DSM 1135, complete genomemicrocompartments protein1e-1273.9
NC_009699:2287893:229612722961272296417291Clostridium botulinum F str. Langeland chromosome, complete genomemicrocompartments family protein1e-1273.9
NC_012658:2295536:230451123045112304801291Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein1e-1273.9
NC_017297:2288000:229623922962392296529291Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein1e-1273.9
NC_013517:1055854:112352411235241123799276Sebaldella termitidis ATCC 33386, complete genomemicrocompartments protein1e-1273.9
NC_014019:3543389:355222235522223552515294Bacillus megaterium QM B1551 chromosome, complete genomeethanolamine utilization protein EutM1e-1273.9
NC_013192:63111:833848338483659276Leptotrichia buccalis DSM 1135, complete genomemicrocompartments protein9e-1373.9
NC_014328:4316008:432155743215574321847291Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment protein9e-1373.9
NC_014328:1286407:129793312979331298223291Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment protein9e-1373.9
NC_013517:1055854:112546311254631125756294Sebaldella termitidis ATCC 33386, complete genomemicrocompartments protein2e-1273.2
NC_010723:1465097:148577314857731486063291Clostridium botulinum E3 str. Alaska E43, complete genomebacterial microcompartments family protein2e-1273.2
NC_010001:1745089:176664817666481766932285Clostridium phytofermentans ISDg, complete genomemicrocompartments protein1e-1273.2
NC_010674:1496500:151556015155601515850291Clostridium botulinum B str. Eklund 17B, complete genomepropanediol utilization protein PduA2e-1272.8
NC_003366:1091766:110572111057211106011291Clostridium perfringens str. 13, complete genomepropanediol utilization protein2e-1272.4
NC_008261:1048515:106245710624571062747291Clostridium perfringens ATCC 13124, complete genomeethanolamine utilization protein EutM2e-1272.4
NC_009633:286677:299934299934300218285Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein3e-1272.4
NC_005042:513931:530906530906531415510Prochlorococcus marinus subsp. marinus str. CCMP1375, completeCarboxysome shell peptide, CsoS15e-1271.6
NC_014376:1586649:160079216007921601091300Clostridium saccharolyticum WM1 chromosome, complete genomemicrocompartments protein7e-1271.2
NC_012491:5914500:593835159383515938638288Brevibacillus brevis NBRC 100599, complete genomehypothetical protein6e-1271.2
NC_013315:2059007:207238620723862072673288Clostridium difficile CD196 chromosome, complete genomeethanolamine/propanediol utilization protein6e-1271.2
NC_017179:2067015:208039420803942080681288Clostridium difficile BI1, complete genomeethanolamine/propanediol utilization protein6e-1271.2
NC_009922:868262:879317879317879610294Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein7e-1270.9
NC_014328:4316008:432118643211864321482297Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment protein8e-1270.9
NC_014328:1286407:129829812982981298594297Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment protein8e-1270.9
NC_007519:3240864:326432332643233264601279Desulfovibrio alaskensis G20 chromosome, complete genomeethanolamine utilization protein eutM9e-1270.9
NC_013517:1055854:112283711228371123112276Sebaldella termitidis ATCC 33386, complete genomemicrocompartments protein1e-1170.5
NC_014614:284005:298729298729299022294Clostridium sticklandii, complete genomeputative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein1e-1170.1
NC_009922:2556033:256346325634632563759297Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein1e-1170.1
NC_007907:456164:472491472491472769279Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1170.1
NC_010001:1745089:175168417516841751974291Clostridium phytofermentans ISDg, complete genomemicrocompartments protein2e-1169.7
NC_015275:4493500:449848144984814498771291Clostridium lentocellum DSM 5427 chromosome, complete genomemicrocompartments protein2e-1169.7
NC_015581:1791658:180071418007141801022309Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomemicrocompartments protein2e-1169.3
NC_016584:1998000:202628320262832026615333Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein3e-1169.3
NC_015581:1791658:180109818010981801397300Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomemicrocompartments protein3e-1168.9
NC_009253:1381401:139119213911921391479288Desulfotomaculum reducens MI-1 chromosome, complete genomemicrocompartments protein3e-1168.9
NC_009922:411434:420510420510420776267Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein4e-1168.6
NC_016584:1714507:171854317185431718875333Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein4e-1168.6
NC_007907:456164:472172472172472462291Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1168.6
NC_008319:1727686:174459617445961745027432Synechococcus sp. CC9311, complete genomepossible carbon dioxide concentrating mechanism protein CcmK3e-1168.6
NC_009481:676478:681305681305681856552Synechococcus sp. WH 7803 chromosome, complete genomecarboxysome shell peptide, CsoS13e-1168.6
NC_018515:1663912:167198016719801672312333Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein5e-1168.2
NC_009633:3933941:394007839400783940377300Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein5e-1168.2
NC_007520:903799:923593923593923901309Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein7e-1167.8
NC_010001:1488000:149784314978431498337495Clostridium phytofermentans ISDg, complete genomemicrocompartments protein7e-1167.8
NC_007520:903799:923273923273923566294Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein8e-1167.8
NC_018664:3009166:304535030453503045625276Clostridium acidurici 9a chromosome, complete genomemicrocompartment protein9e-1167.4
NC_007520:903799:922956922956923246291Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein9e-1167.4
NC_007335:1820332:183589818358981836446549Prochlorococcus marinus str. NATL2A, complete genomecarboxysome shell peptide, CsoS18e-1167.4
NC_008819:541000:555761555761556309549Prochlorococcus marinus str. NATL1A, complete genomecarboxysome structural protein CsoS18e-1167.4
NC_014654:1113116:111742211174221117691270Halanaerobium sp. 'sapolanicus' chromosome, complete genomemicrocompartments protein1e-1067
NC_011837:830436:843565843565843930366Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-1067
NC_009706:830461:843677843677843955279Clostridium kluyveri DSM 555 chromosome, complete genomemicrocompartment shellprotein1e-1067
NC_018870:705900:728118728118728420303Thermacetogenium phaeum DSM 12270 chromosome, complete genomemicrocompartment protein1e-1066.6
NC_008497:1575884:157969115796911579969279Lactobacillus brevis ATCC 367, complete genomePropanediol utilization protein3e-1065.9
NC_005072:508827:518725518725519021297Prochlorococcus marinus subsp. pastoris str. CCMP1986, completecarboxysome shell protein CsoS13e-1065.9
NC_016584:1998000:202890320289032029214312Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein2e-1065.9
NC_008817:539349:549224549224549535312Prochlorococcus marinus str. MIT 9515, complete genomecarboxysome shell protein CsoS12e-1065.9
NC_005042:513931:524074524074524385312Prochlorococcus marinus subsp. marinus str. CCMP1375, completeCarboxysome shell peptide, CsoS12e-1065.9
NC_007335:1820332:182903218290321829343312Prochlorococcus marinus str. NATL2A, complete genomecarboxysome shell protein CsoS12e-1065.9
NC_008819:541000:548895548895549206312Prochlorococcus marinus str. NATL1A, complete genomecarboxysome shell protein CsoS12e-1065.9
NC_008816:518895:528795528795529106312Prochlorococcus marinus str. AS9601, complete genomecarboxysome shell protein CsoS12e-1065.9
NC_007577:503440:513352513352513663312Prochlorococcus marinus str. MIT 9312, complete genomecarboxysome shell protein CsoS12e-1065.9
NC_009840:544816:554730554730555041312Prochlorococcus marinus str. MIT 9215, complete genomecarboxysome shell protein CsoS12e-1065.9
NC_009091:493302:503223503223503534312Prochlorococcus marinus str. MIT 9301, complete genomecarboxysome shell protein CsoS12e-1065.9
NC_016584:1714507:172112717211271721438312Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein3e-1065.5
NC_008344:811386:829160829160829456297Nitrosomonas eutropha C91, complete genomemicrocompartments protein4e-1065.5
NC_018870:705900:733740733740734057318Thermacetogenium phaeum DSM 12270 chromosome, complete genomemicrocompartment protein4e-1065.5
NC_012488:1159463:116367711636771163964288Listeria monocytogenes Clip81459, complete genomePduA protein4e-1065.1
NC_009922:411434:421503421503421778276Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein6e-1064.7
NC_008750:450233:468932468932469234303Shewanella sp. W3-18-1, complete genomemicrocompartment protein7e-1064.3
NC_008344:811386:829498829498829845348Nitrosomonas eutropha C91, complete genomemicrocompartments protein8e-1064.3
NC_009438:212476:231372231372231674303Shewanella putrefaciens CN-32 chromosome, complete genomemicrocompartments protein8e-1064.3
NC_018515:1663912:167480616748061675117312Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein1e-0963.9
NC_010320:1949852:196425419642541964535282Thermoanaerobacter sp. X514 chromosome, complete genomemicrocompartments protein1e-0963.5
NC_014538:985339:989809989809990090282Thermoanaerobacter sp. X513 chromosome, complete genomemicrocompartments protein1e-0963.5
NC_013766:1202713:120563012056301205917288Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein1e-0963.5
NC_012488:1159463:117035411703541170629276Listeria monocytogenes Clip81459, complete genomecarboxysome structural protein2e-0963.2
NC_013766:1202713:121230612123061212581276Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-0963.2
NC_014654:1113116:112459411245941124899306Halanaerobium sp. 'sapolanicus' chromosome, complete genomemicrocompartments protein2e-0963.2
NC_009495:2244774:225959522595952259903309Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemicrocompartments family protein3e-0962.4
NC_009697:2173000:218823721882372188545309Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein3e-0962.4
NC_009698:2171151:218845621884562188764309Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein3e-0962.4
NC_016584:5625975:562987456298745630164291Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein3e-0962.4
NC_009699:2287893:230881423088142309122309Clostridium botulinum F str. Langeland chromosome, complete genomemicrocompartments family protein3e-0962.4
NC_012658:2295536:231696523169652317273309Clostridium botulinum Ba4 str. 657 chromosome, complete genome3e-0962.4
NC_017297:2288000:230893023089302309238309Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein3e-0962.4
NC_019970:2080419:209413520941352094410276Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein5e-0961.6
NC_011601:2139188:218429621842962184580285Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomepropanediol utilization protein PduA7e-0961.2
NC_014019:3543389:355019435501943550607414Bacillus megaterium QM B1551 chromosome, complete genomeethanolamine utilization protein2e-0859.7
NC_019970:2080419:208719720871972087490294Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein2e-0859.7
NC_010723:1967106:197982819798281980106279Clostridium botulinum E3 str. Alaska E43, complete genomepropanediol utilization protein PduA3e-0858.9
NC_010296:4384000:439597043959704396281312Microcystis aeruginosa NIES-843, complete genomecarbon dioxide concentrating mechanism protein7e-0857.8
NC_010674:1822963:182918218291821829460279Clostridium botulinum B str. Eklund 17B, complete genomepropanediol utilization protein PduA7e-0857.8
NC_010723:1967106:198021119802111980489279Clostridium botulinum E3 str. Alaska E43, complete genomepropanediol utilization protein PduA7e-0857.8
NC_014501:3210323:321896932189693219280312Cyanothece sp. PCC 7822 chromosome, complete genomemicrocompartments protein6e-0857.8
NC_011729:1496848:150941815094181509729312Cyanothece sp. PCC 7424 chromosome, complete genomemicrocompartments protein6e-0857.8
NC_011726:1665315:167198016719801672291312Cyanothece sp. PCC 8801, complete genomemicrocompartments protein8e-0857.4
NC_010674:1496500:150134815013481501653306Clostridium botulinum B str. Eklund 17B, complete genomepropanediol utilization protein PduA8e-0857.4
NC_010674:1822963:182956518295651829843279Clostridium botulinum B str. Eklund 17B, complete genomepropanediol utilization protein PduA9e-0857.4
NC_014501:3210323:321932232193223219633312Cyanothece sp. PCC 7822 chromosome, complete genomemicrocompartments protein1e-0757
NC_010723:1465097:147156114715611471866306Clostridium botulinum E3 str. Alaska E43, complete genomepropanediol utilization protein PduA1e-0757
NC_018664:3009166:304680030468003047078279Clostridium acidurici 9a chromosome, complete genomemicrocompartment protein1e-0757
NC_013315:2059007:207011720701172070818702Clostridium difficile CD196 chromosome, complete genomeethanolamine/propanediol utilisation protein2e-0756.6
NC_017179:2067015:207812520781252078826702Clostridium difficile BI1, complete genomeethanolamine/propanediol utilisation protein2e-0756.6
NC_011726:1665315:167237316723731672708336Cyanothece sp. PCC 8801, complete genomemicrocompartments protein2e-0756.6
NC_011729:1496848:150906015090601509371312Cyanothece sp. PCC 7424 chromosome, complete genomemicrocompartments protein1e-0756.6
NC_011729:1496848:150861315086131508951339Cyanothece sp. PCC 7424 chromosome, complete genomemicrocompartments protein2e-0756.2
NC_014501:3210323:321974232197423220080339Cyanothece sp. PCC 7822 chromosome, complete genomemicrocompartments protein2e-0756.2
NC_009495:2244774:225992722599272260223297Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemicrocompartments family protein3e-0755.8
NC_009697:2173000:218856921885692188865297Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein3e-0755.8
NC_009698:2171151:218878821887882189084297Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein3e-0755.8
NC_009699:2287893:230914623091462309442297Clostridium botulinum F str. Langeland chromosome, complete genomemicrocompartments family protein3e-0755.8
NC_012658:2295536:231729723172972317593297Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein3e-0755.8
NC_017297:2288000:230926223092622309558297Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein3e-0755.8
NC_007946:4875997:487599748759974876281285Escherichia coli UTI89, complete genomehypothetical protein2e-0755.8
NC_007946:4875997:487629948762994876577279Escherichia coli UTI89, complete genomehypothetical protein6e-0754.7
NC_009633:3933941:395272639527263953025300Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein7e-0754.3
NC_009438:212476:225709225709225999291Shewanella putrefaciens CN-32 chromosome, complete genomemicrocompartments protein9e-0754.3
NC_008750:450233:463269463269463559291Shewanella sp. W3-18-1, complete genomemicrocompartment protein9e-0754.3
NC_010674:1496500:150102515010251501321297Clostridium botulinum B str. Eklund 17B, complete genomepropanediol utilization protein PduA1e-0653.9
NC_014633:442755:457828457828458106279Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencemicrocompartments protein1e-0653.5
NC_010296:4384000:439556243955624395903342Microcystis aeruginosa NIES-843, complete genomecarbon dioxide concentrating mechanism protein1e-0653.5
NC_010001:1745089:175330317533031753599297Clostridium phytofermentans ISDg, complete genomemicrocompartments protein2e-0653.1
NC_010723:1967106:198050519805051981005501Clostridium botulinum E3 str. Alaska E43, complete genomeputative propanediol utilization protein2e-0652.8
NC_015589:2100175:210169421016942101993300Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemicrocompartments protein2e-0652.8
NC_010723:1465097:147123814712381471534297Clostridium botulinum E3 str. Alaska E43, complete genomebacterial microcompartments family protein2e-0652.8
NC_009922:2556033:257768425776842577980297Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein2e-0652.8
NC_009633:3933941:395239939523993952701303Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein3e-0652.4
NC_009922:411434:421122421122421499378Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein4e-0652
NC_014328:4316008:433563543356354335931297Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment shellprotein4e-0651.6
NC_016584:5625975:564441856444185644708291Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein5e-0651.6