Pre_GI: BLASTN Hits

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Query: NC_014323:816027 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 816027, End: 841696, Length: 25670

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014323:4619344*4619344465241733074Herbaspirillum seropedicae SmR1 chromosome, complete genome01239BLASTN svgBLASTP svg
NC_010804:32439632439635325628861Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-128468BLASTN svgBLASTP svg
NC_008390:40731540731543675629442Burkholderia cepacia AMMD chromosome 1, complete sequence1e-128468BLASTN svgBLASTP svg
NC_007510:40984340984345009940257Burkholderia sp. 383 chromosome 1, complete sequence3e-126460BLASTN svgBLASTP svg
NC_003296:941920*94192098880146882Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-84321BLASTN svgBLASTP svg
NC_018691:24107792410779243591125133Alcanivorax dieselolei B5 chromosome, complete genome1e-79305BLASTN svgBLASTP svg
NC_010002:42566514256651428631629666Delftia acidovorans SPH-1, complete genome7e-78299BLASTN svgBLASTP svg
NC_007963:2555012*2555012257573920728Chromohalobacter salexigens DSM 3043, complete genome1e-76295BLASTN svgBLASTP svg
NC_015563:33090973309097334276333667Delftia sp. Cs1-4 chromosome, complete genome3e-74287BLASTN svgBLASTP svg
NC_014931:60316456031645605636324719Variovorax paradoxus EPS chromosome, complete genome2e-72281BLASTN svgBLASTP svg
NC_020064:29218092921809295042328615Serratia marcescens FGI94, complete genome3e-46194BLASTN svgBLASTP svg
NC_010086:87172387172390117629454Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-41178BLASTN svgBLASTP svg
NC_010805:15767351576735160409927365Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-41178BLASTN svgBLASTP svg
NC_007511:17805001780500180270922210Burkholderia sp. 383 chromosome 2, complete sequence7e-41176BLASTN svgBLASTP svg
NC_008391:27125427125429909927846Burkholderia cepacia AMMD chromosome 2, complete sequence4e-36161BLASTN svgBLASTP svg
NC_015663:41296854129685415207222388Enterobacter aerogenes KCTC 2190 chromosome, complete genome6e-29137BLASTN svgBLASTP svg
NC_006349:40080740080742001219206Burkholderia mallei ATCC 23344 chromosome 2, complete sequence3e-28135BLASTN svgBLASTP svg
NC_008313:69169269169271552323832Ralstonia eutropha H16 chromosome 1, complete sequence3e-28135BLASTN svgBLASTP svg
NC_008835:18279051827905185016122257Burkholderia mallei NCTC 10229 chromosome I, complete sequence3e-28135BLASTN svgBLASTP svg
NC_009079:40289140289142220419314Burkholderia mallei NCTC 10247 chromosome I, complete sequence3e-28135BLASTN svgBLASTP svg
NC_007511:10940501094050112124627197Burkholderia sp. 383 chromosome 2, complete sequence1e-27133BLASTN svgBLASTP svg
NC_014306:67988867988870467824791Erwinia billingiae Eb661, complete genome2e-26129BLASTN svgBLASTP svg
NC_009832:33130583313058333643323376Serratia proteamaculans 568, complete genome2e-26129BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome6e-26127BLASTN svgBLASTP svg
CP002185:234719*23471925468519967Escherichia coli W, complete genome1e-23119BLASTN svgBLASTP svg
NC_008570:1986466*1986466201051824053Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-21111BLASTN svgBLASTP svg
NC_007435:19811641981164201096229799Burkholderia pseudomallei 1710b chromosome II, complete sequence2e-19105BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome9e-19103BLASTN svgBLASTP svg
NC_006351:14278814278817240329616Burkholderia pseudomallei K96243 chromosome 2, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_009078:142794*14279417264129848Burkholderia pseudomallei 1106a chromosome II, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_008536:2961460*2961460298496123502Solibacter usitatus Ellin6076, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_012779:26198712619871264372223852Edwardsiella ictaluri 93-146, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012721:13954171395417142220626790Burkholderia glumae BGR1 chromosome 2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013421:11435001143500116948625987Pectobacterium wasabiae WPP163, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010645:27890627890629929520390Bordetella avium 197N, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015740:2407500*2407500244682739328Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_014118:11714111171411119462023210Burkholderia sp. CCGE1002 chromosome chromosome 2, complete1e-1179.8BLASTN svgBLASTP svg
NC_013592:14245601424560145021625657Dickeya dadantii Ech586, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014121:18228951822895184662423730Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_010501:35757263575726360509929374Pseudomonas putida W619, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010067:25297502529750259435464605Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-1075.8BLASTN svgBLASTP svg
NC_020260:88230788230791401031704Cronobacter sakazakii Sp291, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014761:41737741737743812520749Oceanithermus profundus DSM 14977 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014121:37769023776902380024423343Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_006155:17560001756000179467638677Yersinia pseudotuberculosis IP 32953, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005810:39172543917254395265235399Yersinia pestis biovar Microtus str. 91001, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005810:14677721467772150509937328Yersinia pestis biovar Microtus str. 91001, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005085:14980001498000152157823579Chromobacterium violaceum ATCC 12472, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004088:3689000*3689000372277733778Yersinia pestis KIM, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003143:16300001630000167609946100Yersinia pestis CO92, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003143:1059580*1059580109467535096Yersinia pestis CO92, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008149:28023922802392285367651285Yersinia pestis Nepal516, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008149:3556999*3556999359064933651Yersinia pestis Nepal516, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019673:359540*35954038271523176Saccharothrix espanaensis DSM 44229 complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010634:17555481755548179542439877Yersinia pseudotuberculosis PB1/+, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010465:89392189392191618522265Yersinia pseudotuberculosis YPIII, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010159:31206423120642314771827077Yersinia pestis Angola, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010159:17246917246919591323445Yersinia pestis Angola, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008150:84472784472789009945373Yersinia pestis Antiqua, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008150:31790331790335159933697Yersinia pestis Antiqua, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018868:973379*97337999850825130Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009434:2577717*2577717259643418718Pseudomonas stutzeri A1501, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003888:40312994031299405409922801Streptomyces coelicolor A3(2), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006155:3805640*3805640384073735098Yersinia pseudotuberculosis IP 32953, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010125:1651687*1651687167689225206Gluconacetobacter diazotrophicus PAl 5, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010634:3720214*3720214375380933596Yersinia pseudotuberculosis PB1/+, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014215:1929000*1929000194714618147Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,8e-0763.9BLASTN svgBLASTP svg
NC_014355:18650031865003194366878666Candidatus Nitrospira defluvii, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014935:15118351511835153500523171Nitratifractor saLSUginis DSM 16511 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_005296:4985991*4985991500948223492Rhodopseudomonas palustris CGA009, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009832:19464011946401197178325383Serratia proteamaculans 568, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010625:15134361513436153609922664Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_011004:5283648*5283648530714923502Rhodopseudomonas palustris TIE-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011420:2692857*2692857271509922243Rhodospirillum centenum SW, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013855:19677819677823386637089Azospirillum sp. B510 plasmid pAB510a, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome3e-0661.9BLASTN svgBLASTP svg