Pre_GI: BLASTN Hits

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Query: NC_014323:625155 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 625155, End: 650851, Length: 25697

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008786:3323167*3323167337505651890Verminephrobacter eiseniae EF01-2, complete genome2e-87331BLASTN svgBLASTP svg
NC_014931:4490526*4490526451036419839Variovorax paradoxus EPS chromosome, complete genome2e-75291BLASTN svgBLASTP svg
NC_013959:10590041059004111084151838Sideroxydans lithotrophicus ES-1 chromosome, complete genome2e-62248BLASTN svgBLASTP svg
NC_006513:27082132708213273362325411Azoarcus sp. EbN1, complete genome2e-35159BLASTN svgBLASTP svg
NC_013851:24414072441407246552624120Allochromatium vinosum DSM 180 chromosome, complete genome3e-34155BLASTN svgBLASTP svg
NC_007404:1776147*1776147179878922643Thiobacillus denitrificans ATCC 25259, complete genome9e-22113BLASTN svgBLASTP svg
NC_012559:2663747*2663747271401150265Laribacter hongkongensis HLHK9, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_011894:67089706708970672882019851Methylobacterium nodulans ORS 2060, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015588:2200517*2200517222724526729Isoptericola variabilis 225 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015677:285896*28589630970623811Ramlibacter tataouinensis TTB310 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010162:51292705129270514915519886Sorangium cellulosum 'So ce 56', complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012691:31265003126500315237825879Tolumonas auensis DSM 9187, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015593:2103815*2103815214825244438Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete8e-0763.9BLASTN svgBLASTP svg
NC_013205:29223432922343294962327281Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,8e-0763.9BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014117:442616*44261651580273187Burkholderia sp. CCGE1002 chromosome chromosome 1, complete3e-0661.9BLASTN svgBLASTP svg