Query: NC_014323:625155 Herbaspirillum seropedicae SmR1 chromosome, complete genome
Start: 625155, End: 650851, Length: 25697
Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria
General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008786:3323167* | 3323167 | 3375056 | 51890 | Verminephrobacter eiseniae EF01-2, complete genome | 2e-87 | 331 | BLASTN svg | BLASTP svg |
NC_014931:4490526* | 4490526 | 4510364 | 19839 | Variovorax paradoxus EPS chromosome, complete genome | 2e-75 | 291 | BLASTN svg | BLASTP svg |
NC_013959:1059004 | 1059004 | 1110841 | 51838 | Sideroxydans lithotrophicus ES-1 chromosome, complete genome | 2e-62 | 248 | BLASTN svg | BLASTP svg |
NC_006513:2708213 | 2708213 | 2733623 | 25411 | Azoarcus sp. EbN1, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
NC_013851:2441407 | 2441407 | 2465526 | 24120 | Allochromatium vinosum DSM 180 chromosome, complete genome | 3e-34 | 155 | BLASTN svg | BLASTP svg |
NC_007404:1776147* | 1776147 | 1798789 | 22643 | Thiobacillus denitrificans ATCC 25259, complete genome | 9e-22 | 113 | BLASTN svg | BLASTP svg |
NC_012559:2663747* | 2663747 | 2714011 | 50265 | Laribacter hongkongensis HLHK9, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_011894:6708970 | 6708970 | 6728820 | 19851 | Methylobacterium nodulans ORS 2060, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_015588:2200517* | 2200517 | 2227245 | 26729 | Isoptericola variabilis 225 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015677:285896* | 285896 | 309706 | 23811 | Ramlibacter tataouinensis TTB310 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010162:5129270 | 5129270 | 5149155 | 19886 | Sorangium cellulosum 'So ce 56', complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_012691:3126500 | 3126500 | 3152378 | 25879 | Tolumonas auensis DSM 9187, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015593:2103815* | 2103815 | 2148252 | 44438 | Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013205:2922343 | 2922343 | 2949623 | 27281 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010524:4644587* | 4644587 | 4689822 | 45236 | Leptothrix cholodnii SP-6, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014117:442616* | 442616 | 515802 | 73187 | Burkholderia sp. CCGE1002 chromosome chromosome 1, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |