Pre_GI: BLASTN Hits

Some Help

Query: NC_014323:27327 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 27327, End: 46470, Length: 19144

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-32149BLASTN svgBLASTP svg
NC_008390:1293823*1293823131887025048Burkholderia cepacia AMMD chromosome 1, complete sequence5e-29137BLASTN svgBLASTP svg
NC_015563:3786192*3786192382040734216Delftia sp. Cs1-4 chromosome, complete genome3e-27131BLASTN svgBLASTP svg
NC_010804:1334581*1334581135591721337Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-27131BLASTN svgBLASTP svg
NC_010943:14268851426885145859931715Stenotrophomonas maltophilia K279a, complete genome2e-25125BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence2e-25125BLASTN svgBLASTP svg
NC_008782:32520923252092327781225721Acidovorax sp. JS42, complete genome7e-25123BLASTN svgBLASTP svg
NC_014117:442616*44261651580273187Burkholderia sp. CCGE1002 chromosome chromosome 1, complete3e-24121BLASTN svgBLASTP svg
NC_015563:4093650*4093650411960125952Delftia sp. Cs1-4 chromosome, complete genome4e-23117BLASTN svgBLASTP svg
NC_010002:37853133785313380809922787Delftia acidovorans SPH-1, complete genome2e-22115BLASTN svgBLASTP svg
NC_013722:15778181577818160047922662Xanthomonas albilineans, complete genome7e-22113BLASTN svgBLASTP svg
NC_008752:4747376*4747376477161024235Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-20107BLASTN svgBLASTP svg
NC_010002:33997703399770341841218643Delftia acidovorans SPH-1, complete genome4e-20107BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-20107BLASTN svgBLASTP svg
NC_015947:12906141290614131509924486Burkholderia sp. JV3 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome2e-19105BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-19105BLASTN svgBLASTP svg
NC_007434:1809946*1809946187124661301Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-19105BLASTN svgBLASTP svg
NC_009074:14706891470689150586435176Burkholderia pseudomallei 668 chromosome I, complete sequence2e-19105BLASTN svgBLASTP svg
NC_012791:72181372181376114739335Variovorax paradoxus S110 chromosome 1, complete genome2e-19105BLASTN svgBLASTP svg
NC_014973:10715001071500110044928950Geobacter sp. M18 chromosome, complete genome7e-19103BLASTN svgBLASTP svg
NC_003296:16969581696958171877421817Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-1799.6BLASTN svgBLASTP svg
NC_008752:4086283*4086283411381327531Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010688:38700038700041036023361Xanthomonas campestris pv. campestris, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012721:10950010950012980920310Burkholderia glumae BGR1 chromosome 2, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_003295:21117302111730213127819549Ralstonia solanacearum GMI1000, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_006351:16317601631760165459922840Burkholderia pseudomallei K96243 chromosome 2, complete sequence4e-1797.6BLASTN svgBLASTP svg
NC_007435:30593730593732993724001Burkholderia pseudomallei 1710b chromosome II, complete sequence4e-1797.6BLASTN svgBLASTP svg
NC_009078:15785001578500160125422755Burkholderia pseudomallei 1106a chromosome II, complete sequence4e-1797.6BLASTN svgBLASTP svg
NC_016010:1822212*1822212190411881907Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete6e-1693.7BLASTN svgBLASTP svg
NC_014733:2201485*2201485222586124377Methylovorus sp. MP688 chromosome, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_007086:39672339672342172325001Xanthomonas campestris pv. campestris str. 8004, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_003902:39600039600042428128282Xanthomonas campestris pv. campestris str. ATCC 33913, complete6e-1693.7BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014910:42072274207227422797420748Alicycliphilus denitrificans BC chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013956:44900004490000451370923710Pantoea ananatis LMG 20103 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008825:27006172700617271935418738Methylibium petroleiphilum PM1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_015424:35207833520783357390853126Aeromonas veronii B565 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_015138:42467874246787426900822222Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_013282:37811493781149380484323695Cronobacter turicensis, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-1385.7BLASTN svgBLASTP svg
NC_008391:63999663999666160321608Burkholderia cepacia AMMD chromosome 2, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_012912:777592*77759280009922508Dickeya zeae Ech1591, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_012912:40718594071859411755145693Dickeya zeae Ech1591, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015138:20132320132322011418792Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-1177.8BLASTN svgBLASTP svg
NC_015061:3840463*3840463391463974177Rahnella sp. Y9602 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009778:10700001070000109309923100Enterobacter sakazakii ATCC BAA-894, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003197:17132591713259173659923341Salmonella typhimurium LT2, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008752:16687716687718811421238Acidovorax avenae subsp. citrulli AAC00-1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008782:3110744*3110744313966428921Acidovorax sp. JS42, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013282:1804909*1804909182709922191Cronobacter turicensis, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013956:17621711762171180720245032Pantoea ananatis LMG 20103 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015856:29338293384929919962Collimonas fungivorans Ter331 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_002927:12925731292573131262720055Bordetella bronchiseptica RB50, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_006350:3957454*3957454398298825535Burkholderia pseudomallei K96243 chromosome 1, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_007434:111607*11160713392422318Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_006905:17264161726416175294526530Salmonella enterica subsp. enterica serovar Choleraesuis str9e-0969.9BLASTN svgBLASTP svg
NC_009792:36653693665369370602240654Citrobacter koseri ATCC BAA-895, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010102:13883441388344141572327380Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,9e-0969.9BLASTN svgBLASTP svg
NC_011080:17096121709612173614226531Salmonella enterica subsp. enterica serovar Newport str. SL254,9e-0969.9BLASTN svgBLASTP svg
NC_011083:17613521761352178789226541Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,9e-0969.9BLASTN svgBLASTP svg
NC_014500:31752833175283321401838736Dickeya dadantii 3937 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015376:17528831752883177658023698Burkholderia gladioli BSR3 chromosome chromosome 2, complete9e-0969.9BLASTN svgBLASTP svg
NC_015563:35716823571682359959927918Delftia sp. Cs1-4 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_020260:1111130*1111130113509923970Cronobacter sakazakii Sp291, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012721:24068742406874243009923226Burkholderia glumae BGR1 chromosome 2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013421:4714478*4714478478002665549Pectobacterium wasabiae WPP163, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012724:26110002611000263159920600Burkholderia glumae BGR1 chromosome 1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007951:22336762233676225569422019Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-0765.9BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009076:3876733*3876733389976123029Burkholderia pseudomallei 1106a chromosome I, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_010515:14915901491590151491423325Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_014118:987889987889104450356615Burkholderia sp. CCGE1002 chromosome chromosome 2, complete2e-0661.9BLASTN svgBLASTP svg
NC_010002:39808323980832399913918308Delftia acidovorans SPH-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007511:13009781300978132645425477Burkholderia sp. 383 chromosome 2, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_008148:17116791711679173196220284Rubrobacter xylanophilus DSM 9941, complete genome9e-0660BLASTN svgBLASTP svg
NC_008536:27178912717891274033422444Solibacter usitatus Ellin6076, complete genome9e-0660BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome9e-0660BLASTN svgBLASTP svg
NC_014220:18587471858747187983121085Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014258:42262*422628159939338Pantoea vagans C9-1 plasmid pPag3, complete sequence9e-0660BLASTN svgBLASTP svg
NC_007953:93834693834696214223797Burkholderia xenovorans LB400 chromosome 3, complete sequence9e-0660BLASTN svgBLASTP svg