Pre_GI: BLASTP Hits

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Query: NC_014323:4619344:4628948 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4628948, End: 4630036, Length: 1089

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008390:407315:4308534308534319531101Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF13051e-83310
NC_010084:3173757:3200421320042132015211101Burkholderia multivorans ATCC 17616 chromosome 1, completetype VI secretion protein5e-83308
NC_007510:409843:4298524298524309521101Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF13056e-83307
NC_017075:2689014:2707126270712627081961071Rubrivivax gelatinosus IL144, complete genomehypothetical protein2e-73276
NC_010322:3084834:3104873310487331059431071Pseudomonas putida GB-1 chromosome, complete genometype VI secretion protein1e-46187
NC_002947:3492379:3491345349134534924151071Pseudomonas putida KT2440, complete genomehypothetical protein2e-45182
NC_012779:2619871:2637980263798026390051026Edwardsiella ictaluri 93-146, complete genomehypothetical protein5e-38158
NC_014355:1865003:1896587189658718976511065Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-34146
NC_012997:1689583:1703569170356917046841116Teredinibacter turnerae T7901, complete genometype VI secretion protein, VC_A0111 family9e-32137
NC_007963:2555012:255402325540232555015993Chromohalobacter salexigens DSM 3043, complete genomeprotein of unknown function DUF13051e-30134
NC_018868:973379:9849389849389860801143Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein1e-1997.4
NC_016816:1823127:1842920184292018439691050Pantoea ananatis LMG 5342, complete genometype VI secretion system, core protein2e-1894
NC_016514:2713834:2771045277104527720881044Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein3e-1789.7
NC_014306:679888:6994466994467005101065Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein6e-1789
NC_008253:257059:2570592570592581081050Escherichia coli 536, complete genomehypothetical protein7e-1788.6
NC_009832:3313058:3313058331305833141311074Serratia proteamaculans 568, complete genomeprotein of unknown function DUF13059e-1788.2
NC_020064:2921809:2942381294238129434511071Serratia marcescens FGI94, complete genometype VI secretion protein, VC_A0111 family9e-1788.2
NC_011745:258727:2577142577142587631050Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1687.4
NC_007511:1780500:1799185179918518002881104Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF13051e-1687.4
NC_011751:256830:2558172558172568661050Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-1687
NC_008563:258725:2577122577122587611050Escherichia coli APEC O1, complete genomehypothetical protein4e-1685.9
NC_007946:258747:2577342577342587831050Escherichia coli UTI89, complete genomehypothetical protein4e-1685.9
NC_011742:258746:2577332577332587821050Escherichia coli S88 chromosome, complete genomehypothetical protein4e-1685.9
NC_013282:1256769:1263587126358712646511065Cronobacter turicensis, complete genomehypothetical protein3e-1583.2
NC_015136:813701:8148068148068177632958Burkholderia sp. CCGE1001 chromosome 1, complete sequencetype VI secretion protein3e-1582.8
NC_015663:4129685:4146811414681141478541044Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion system protein ImpH4e-1582.4
NC_010625:670482:6729496729496740371089Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetype VI secretion protein, VC_A0111 family8e-1581.6
CU928145:3360967:338197533819753382934960Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-1480.5
NC_011748:3360967:338197533819753382934960Escherichia coli 55989, complete genomehypothetical protein2e-1480.5
NC_009656:3733913:3739524373952437405311008Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-1479.3
NC_015968:4117835:414967541496754150631957Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein2e-1377
NC_011988:1036618:1063957106395710649671011Agrobacterium vitis S4 chromosome 2, complete genomehypothetical protein3e-1376.6
NC_008570:1986466:200289620028962003894999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein6e-1375.5
NC_010552:592154:6143696143696154931125Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion protein, VC_A0111 family2e-1273.9
NC_016822:267758:2667122667122677941083Shigella sonnei 53G, complete genomehypothetical protein2e-1273.9
NC_009348:2631759:2630791263079126317951005Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein2e-1273.6
NC_004578:2797493:2811942281194228129491008Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-1272
NC_011274:1129686:1128634112863411297281095Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-1272
NC_002947:4604582:4606312460631246073281017Pseudomonas putida KT2440, complete genomehypothetical protein8e-1271.6
NC_013592:1424560:1442701144270114437141014Dickeya dadantii Ech586, complete genometype VI secretion protein, VC_A0111 family4e-1169.3
NC_014228:4331327:4351521435152143525731053Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of the SST VI cluster)9e-1168.2
NC_012721:1395417:1394299139429913954201122Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-1068.2
NC_007952:495000:5085315085315095891059Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein1e-1067.8
NC_014539:3619511:3618414361841436195141101Burkholderia sp. CCGE1003 chromosome 1, complete sequencetype VI secretion protein3e-1066.6
NC_009255:2044291:2044291204429120453071017Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein2e-0963.9
NC_009255:1250939:1277183127718312781991017Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein2e-0963.9
NC_014121:1822895:1842623184262318437081086Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein ImpH1e-0860.8
NC_014306:4376012:4395682439568243967071026Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein2e-0860.1
NC_013892:274297:2742972742972753491053Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-0860.1
NC_016626:400080:4282424282424293061065Burkholderia sp. YI23 plasmid byi_1p, complete sequencetype VI secretion protein3e-0860.1
NC_012731:2302974:2326872232687223279571086Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-0859.7
NC_006349:400807:4008074008074021771371Burkholderia mallei ATCC 23344 chromosome 2, complete sequencehypothetical protein7e-0858.5
NC_009079:402891:4028914028914043691479Burkholderia mallei NCTC 10247 chromosome I, complete sequencehypothetical protein8e-0858.2
NC_008835:1827905:1830848183084818323261479Burkholderia mallei NCTC 10229 chromosome I, complete sequencehypothetical protein8e-0858.2
NC_013855:196778:2011962011962022331038Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein3e-0756.6
NC_005126:3812054:3811002381100238120901089Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0756.2
NC_014837:3766426:3787464378746437885341071Pantoea sp. At-9b chromosome, complete genometype VI secretion protein1e-0654.7