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Query: NC_014169:703889 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 703889, End: 728275, Length: 24387

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010505:1581429*1581429160710125673Methylobacterium radiotolerans JCM 2831, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015957:68592596859259687895419696Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_005125:76072176072180474844028Gloeobacter violaceus PCC 7421, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013851:949973*94997398051930547Allochromatium vinosum DSM 180 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011979:3045952*3045952306914123190Geobacter sp. FRC-32, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008752:35110063511006353392522920Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007517:2055305*2055305208871433410Geobacter metallireducens GS-15, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012857:10974001097400112349826099Ralstonia pickettii 12D chromosome 2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020453:4696000*4696000471843322434Agromonas oligotrophica S58 DNA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007951:570500*57050060471734218Burkholderia xenovorans LB400 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_006905:26300002630000265438924390Salmonella enterica subsp. enterica serovar Choleraesuis str3e-0661.9BLASTN svgBLASTP svg
NC_006814:15381751538175156256724393Lactobacillus acidophilus NCFM, complete genome3e-0661.9BLASTN svgBLASTP svg