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Query: NC_014169:2353711 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 2353711, End: 2380664, Length: 26954

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004307:11083251108325114340935085Bifidobacterium longum NCC2705, complete genome0729BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome1e-122448BLASTN svgBLASTP svg
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome2e-87331BLASTN svgBLASTP svg
NC_015052:2383865*2383865240599922135Bifidobacterium longum subsp. infantis 157F, complete genome5e-85323BLASTN svgBLASTP svg
NC_015052:2071759*2071759209363321875Bifidobacterium longum subsp. infantis 157F, complete genome5e-85323BLASTN svgBLASTP svg
NC_010816:1989868*1989868201173521868Bifidobacterium longum DJO10A, complete genome5e-85323BLASTN svgBLASTP svg
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome7e-69270BLASTN svgBLASTP svg
NC_015067:998500998500102062722128Bifidobacterium longum subsp. longum JCM 1217, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007498:10721121072112109809925988Pelobacter carbinolicus DSM 2380, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_021066:32015003201500323157930080Raoultella ornithinolytica B6, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014976:2117567*2117567214173924173Bacillus subtilis BSn5 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007498:91969791969794610526409Pelobacter carbinolicus DSM 2380, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015067:2282000*2282000230417622177Bifidobacterium longum subsp. longum JCM 1217, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_004307:1701071*1701071172571824648Bifidobacterium longum NCC2705, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010473:16076461607646163120923564Escherichia coli str. K-12 substr. DH10B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006905:65173265173267724625515Salmonella enterica subsp. enterica serovar Choleraesuis str3e-0661.9BLASTN svgBLASTP svg
NC_004369:15528471552847157159918753Corynebacterium efficiens YS-314, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_000913:15170511517051154061423564Escherichia coli K12, complete genome3e-0661.9BLASTN svgBLASTP svg
AC_000091:15219761521976154430422329Escherichia coli W3110 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg