Pre_GI: BLASTP Hits

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Query: NC_014169:703889:712653 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 712653, End: 713690, Length: 1038

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015501:938196:9474409474409488641425Porphyromonas asaccharolytica DSM 20707 chromosome, completetranscriptional regulator, XRE family1e-60233
NC_012225:1375362:1376026137602613770811056Brachyspira hyodysenteriae WA1, complete genomeadenine-specific methyltransferase9e-37154
NC_012225:345704:3603183603183620301713Brachyspira hyodysenteriae WA1, complete genomeSite-specific DNA-methyltransferase4e-34145
NC_017243:723000:736502736502737044543Brachyspira intermedia PWS/A chromosome, complete genomeadenine-specific methyltransferase2e-22106
NC_012214:3931824:3943422394342239452751854Erwinia pyrifoliae Ep1/96, complete genomeadenine specific DNA methyltransferase1e-21103
NC_017171:280762:2990732990733003651293Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeputative DNA modification methylase (adenine-specific methyltransferase)1e-1997.8
NC_011586:268927:3314803314803327721293Acinetobacter baumannii AB0057 chromosome, complete genomesite-specific DNA-methyltransferase1e-1997.8
NC_013961:3709800:3721571372157137234241854Erwinia amylovora, complete genomeadenine-specific methyltransferase3e-1996.3
NC_013971:3713000:3721829372182937236821854Erwinia amylovora ATCC 49946 chromosome, complete genomemodification methylase3e-1996.3
NC_010611:240839:2693332693332705111179Acinetobacter baumannii ACICU, complete genomeAdenine-specific DNA methylase2e-1790.1
NC_015732:91816:99912999121010271116Spirochaeta caldaria DSM 7334 chromosome, complete genomeSite-specific DNA-methyltransferase3e-1582.8
NC_009659:3815966:3825792382579238276961905Janthinobacterium sp. Marseille chromosome, complete genomeDNA adenine methylase1e-1170.9
NC_014365:2004332:2021439202143920238412403Desulfarculus baarsii DSM 2075 chromosome, complete genomeSite-specific DNA-methyltransferase (adenine-specific)4e-1169.3
NC_014844:1773424:1788329178832917907252397Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeadenine-specific DNA-methyltransferase6e-1168.9
NC_007517:3524715:3535829353582935377451917Geobacter metallireducens GS-15, complete genomeDNA adenine methylase2e-0963.9
NC_016001:976556:9818229818229829311110Flavobacterium branchiophilum, complete genomeputative type II modification methyltransferase5e-0962.4
NC_004663:2935060:2935060293506029362351176Bacteroides thetaiotaomicron VPI-5482, complete genomesite-specific DNA-methyltransferase6e-0858.9