Pre_GI: BLASTP Hits

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Query: NC_014169:515957:516654 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 516654, End: 517856, Length: 1203

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015067:998500:1000541100054110017431203Bifidobacterium longum subsp. longum JCM 1217, complete genomephage integrase0758
NC_015052:471944:4962304962304974321203Bifidobacterium longum subsp. infantis 157F, complete genomephage integrase0758
NC_020302:2219378:2242156224215622433671212Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase3e-92338
NC_020302:85821:1265931265931278041212Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase3e-92338
NC_016633:1798758:1801376180137618025721197Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesite-specific recombinase XerD2e-30133
NC_014098:2809689:2815877281587728171181242Bacillus tusciae DSM 2912 chromosome, complete genomeintegrase family protein9e-23108
NC_018867:1303287:1304482130448213057171236Dehalobacter sp. CF chromosome, complete genomeintegrase/recombinase, putative2e-22106
NC_018866:1224748:1225943122594312271781236Dehalobacter sp. DCA chromosome, complete genomehypothetical protein2e-22106
NC_019904:5207309:5207309520730952085771269Echinicola vietnamensis DSM 17526 chromosome, complete genomesite-specific recombinase XerD6e-22105
NC_016626:1699500:1702794170279417040561263Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative integrase/recombinase3e-20100
NC_016589:183432:1986361986361998981263Burkholderia sp. YI23 chromosome 1, complete sequenceputative integrase/recombinase3e-20100
NC_010337:591264:6078656078656090881224Heliobacterium modesticaldum Ice1, complete genomeintegrase/recombinase, putative6e-1789
NC_014376:3009403:3032351303235130335741224Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein6e-1789
NC_010170:1498253:1505848150584815069871140Bordetella petrii, complete genomeintegrase/recombinase1e-1687.8
NC_010170:1324758:1365410136541013665491140Bordetella petrii, complete genomeintegrase/recombinase1e-1687.8
NC_010170:1103224:1109822110982211110301209Bordetella petrii, complete genomeintegrase/recombinase2e-1687.4
NC_015580:2444845:2444845244484524460741230Novosphingobium sp. PP1Y, complete genomephage integrase family protein3e-1686.7
NC_014825:165701:1675111675111687431233Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceintegrase family protein6e-1685.5
NC_007907:3722500:3724204372420437252951092Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1583.6
NC_002678:4859111:4882273488227348834961224Mesorhizobium loti MAFF303099, complete genomeintegrase/recombinase3e-1479.7
NC_008726:6335961:6335961633596163371481188Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein4e-1479.3
NC_018870:757416:7642797642797655441266Thermacetogenium phaeum DSM 12270 chromosome, complete genomephage integrase5e-1479
NC_010337:591264:5981275981275993921266Heliobacterium modesticaldum Ice1, complete genomephage integrase5e-1479
NC_010524:824145:8398308398308411071278Leptothrix cholodnii SP-6, complete genomeintegrase family protein2e-1273.6
NC_011283:1811000:183605118360511836998948Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase3e-1273.2
NC_011662:386162:4209644209644221991236Thauera sp. MZ1T, complete genomeintegrase family protein1e-1171.2
NC_012108:4971086:498941949894194990267849Desulfobacterium autotrophicum HRM2, complete genomeintegrase/recombinase family protein1e-1171.2
NC_014961:50814:7074470744717481005Desulfurococcus mucosus DSM 2162 chromosome, complete genomeintegrase family protein2e-1170.9
NC_014205:1257652:1257652125765212586531002Staphylothermus hellenicus DSM 12710 chromosome, complete genomeintegrase family protein1e-1067.8
NC_009495:2479465:250592825059282506923996Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephage integrase2e-1067.4
NC_009697:2558286:258221725822172583062846Clostridium botulinum A str. ATCC 19397 chromosome, completephage integrase family site specific recombinase3e-1066.6
NC_010571:5650806:5652242565224256535401299Opitutus terrae PB90-1, complete genomeintegrase family protein5e-1065.9
NC_012214:1267589:1267589126758912686591071Erwinia pyrifoliae Ep1/96, complete genomeintegrase5e-1065.9
NC_010516:2676746:270057127005712701566996Clostridium botulinum B1 str. Okra, complete genomephage integrase1e-0964.7
NC_016631:3917253:3940194394019439414861293Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein1e-0964.3
NC_012658:2525931:252890525289052529897993Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage integrase1e-0964.3
NC_015312:3675148:370655737065573707552996Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeintegrase family protein3e-0963.2
NC_014314:576465:658834658834659820987Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeintegrase family protein6e-0962.4
NC_014830:335380:3394563394563405291074Intrasporangium calvum DSM 43043 chromosome, complete genomeintegrase family protein1e-0861.2
NC_013235:1354443:1358929135892913599331005Nakamurella multipartita DSM 44233, complete genomeintegrase family protein6e-0858.9
NC_009033:1108236:1130981113098111319821002Staphylothermus marinus F1, complete genomephage integrase family protein7e-0858.9
NC_014171:3726054:372995937299593730858900Bacillus thuringiensis BMB171 chromosome, complete genomesite-specific tyrosine recombinase9e-0858.5
NC_013926:614206:629210629210630064855Aciduliprofundum boonei T469 chromosome, complete genomeintegrase family protein8e-0858.5
NC_015730:1107840:1129515112951511307531239Roseobacter litoralis Och 149 chromosome, complete genomeputative phage integrase1e-0758.2
NC_014377:1227850:123809612380961238995900Thermosediminibacter oceani DSM 16646 chromosome, complete genometyrosine recombinase XerD subunit2e-0757.4
NC_017208:3816753:384609438460943846993900Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesite-specific tyrosine recombinase XerC2e-0757.4
NC_014733:2363838:238616023861602387056897Methylovorus sp. MP688 chromosome, complete genometyrosine recombinase xerd2e-0757.4
NC_014335:3589726:359683735968373597736900Bacillus cereus biovar anthracis str. CI chromosome, completetyrosine recombinase2e-0757
NC_005957:3665657:366765636676563668555900Bacillus thuringiensis serovar konkukian str. 97-27, completetyrosine recombinase2e-0757
NC_012969:2476318:251726225172622518158897Methylovorus glucosetrophus SIP3-4 chromosome, complete genometyrosine recombinase XerD2e-0757
NC_002936:253760:262087262087263046960Dehalococcoides ethenogenes 195, complete genomesite-specific recombinase, phage integrase family2e-0757
NC_014814:4326500:4331708433170843327901083Mycobacterium sp. Spyr1 chromosome, complete genomesite-specific recombinase XerD2e-0757
NC_009338:4913510:4943570494357049446521083Mycobacterium gilvum PYR-GCK chromosome, complete genomephage integrase family protein2e-0757
NC_007530:3616828:364611036461103647009900Bacillus anthracis str. 'Ames Ancestor', complete genometyrosine recombinase3e-0756.6
NC_005945:3636321:364667836466783647577900Bacillus anthracis str. Sterne, complete genometyrosine recombinase3e-0756.6
NC_003997:3617000:364598336459833646882900Bacillus anthracis str. Ames, complete genometyrosine recombinase3e-0756.6
NC_012659:3617000:364601036460103646909900Bacillus anthracis str. A0248, complete genomesite-specific tyrosine recombinase XerC3e-0756.6
NC_014550:7560:2566025660270091350Arthrobacter arilaitensis Re117, complete genome4e-0756.2
NC_008726:1175999:1183143118314311842371095Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein5e-0755.8
NC_017249:7917586:7963677796367779648971221Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-0755.8
NC_006513:286549:2865492865492878021254Azoarcus sp. EbN1, complete genomephage-related integrase6e-0755.5
NC_008536:435221:442656442656443567912Solibacter usitatus Ellin6076, complete genomephage integrase family protein8e-0755.1
NC_012803:691215:714743714743715681939Micrococcus luteus NCTC 2665, complete genomesite-specific recombinase, integrase family1e-0654.7
NC_016830:6589575:659239665923966593295900Pseudomonas fluorescens F113 chromosome, complete genomeprotein Sss1e-0654.7
NC_014160:43486:6412864128651471020Thermosphaera aggregans DSM 11486 chromosome, complete genomeintegrase family protein1e-0654.7
NC_012803:2195808:2235293223529322364801188Micrococcus luteus NCTC 2665, complete genomesite-specific recombinase, integrase family1e-0654.7
NC_010625:1602191:1602828160282816040451218Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase family protein1e-0654.7
NC_016641:5877164:589234758923475893234888Paenibacillus terrae HPL-003 chromosome, complete genomeputative tyrosine recombinase XerC-like protein2e-0654.3
NC_019897:2004050:202539420253942026296903Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD2e-0653.9
NC_006824:109735:125221125221126177957Azoarcus sp. EbN1 plasmid 2, complete sequenceputative integrase2e-0653.9
NC_009253:829913:844973844973845854882Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein4e-0653.1
NC_020908:4263552:426684742668474267752906Octadecabacter arcticus 238, complete genomeintegrase/recombinase5e-0652.8
NC_013441:2761459:276346827634682764442975Gordonia bronchialis DSM 43247, complete genomeintegrase family protein5e-0652.8
NC_013441:2842134:285618728561872857161975Gordonia bronchialis DSM 43247, complete genomeintegrase family protein5e-0652.8
NC_010524:824145:8301058301058313581254Leptothrix cholodnii SP-6, complete genomeintegrase family protein8e-0652
NC_015580:293803:3283633283633299041542Novosphingobium sp. PP1Y, complete genomephage integrase8e-0652
NC_012962:3463644:3479494347949434805161023Photorhabdus asymbiotica, complete genomephage integrase7e-0652
NC_012962:1068102:1100197110019711012191023Photorhabdus asymbiotica, complete genomePhage integrase7e-0652
NC_012962:1068102:1077908107790810789301023Photorhabdus asymbiotica, complete genomeputative phage integrase/recombinase7e-0652
NC_020908:2466446:247991324799132480827915Octadecabacter arcticus 238, complete genomeintegrase/recombinase7e-0652
NC_012962:1068102:1084715108471510861331419Photorhabdus asymbiotica, complete genomeputative integrase/recombinase9e-0651.6
NC_012962:3463644:3471785347178534732031419Photorhabdus asymbiotica, complete genomeputative integrase9e-0651.6
NC_012962:1068102:1092488109248810939061419Photorhabdus asymbiotica, complete genomeputative integrase/recombinase9e-0651.6