Pre_GI: BLASTP Hits

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Query: NC_014169:2353711:2368753 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 2368753, End: 2372514, Length: 3762

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014638:183115:1831151831151865343420Bifidobacterium bifidum PRL2010 chromosome, complete genomeABC transporter permease0687
NC_014616:213118:2131182131182165373420Bifidobacterium bifidum S17 chromosome, complete genomeABC transporter permease0686
NC_014150:1902241:1921522192152219238432322Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF2143e-0655.5
NC_014393:4988127:4988127498812749906132487Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein7e-63243
NC_015275:53871:7298172981761963216Clostridium lentocellum DSM 5427 chromosome, complete genomeprotein of unknown function DUF2143e-61238
NC_010001:1702350:1699084169908417023563273Clostridium phytofermentans ISDg, complete genomeprotein of unknown function DUF2142e-63245
NC_007907:5428247:5460345546034554627172373Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-1790.5
NC_007907:1547539:1562689156268915650642376Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-1997.4
NC_010376:1433247:1473349147334914767023354Finegoldia magna ATCC 29328, complete genomeABC transporter permease protein1e-58229
NC_014833:3161257:3180417318041731838213405Ruminococcus albus 7 chromosome, complete genomehypothetical protein1e-74282
NC_014833:2855543:2871813287181328739452133Ruminococcus albus 7 chromosome, complete genomehypothetical protein2e-62241
NC_014833:1045180:105227110522711052963693Ruminococcus albus 7 chromosome, complete genomeABC transporter permease2e-0966.2
NC_011134:1951682:1970831197083119731162286Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeABC transporter permease protein1e-1173.6
NC_004350:1252500:1288285128828512906272343Streptococcus mutans UA159, complete genomeconserved hypothetical protein; possible permease7e-1894
NC_015172:2986867:2986867298686729892422376Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeprotein of unknown function DUF2142e-1585.9