Pre_GI: BLASTP Hits

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Query: NC_014169:2353711:2367211 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 2367211, End: 2367444, Length: 234

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011593:1163000:117562311756231175901279Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,2e-0961.2
NC_014656:1829336:1859442185944218607671326Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein3e-0960.5
NC_004307:1815825:182382518238251824211387Bifidobacterium longum NCC2705, complete genomehypothetical protein2e-0961.2
NC_014638:1043854:1050632105063210517291098Bifidobacterium bifidum PRL2010 chromosome, complete genomeIS1557 family transposase7e-1165.9
NC_014638:56500:895058950589753249Bifidobacterium bifidum PRL2010 chromosome, complete genomeIS1557 family transposase4e-1579.7
NC_017219:275476:283018283018283254237Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transposase3e-0857.4
NC_010816:1852406:185905818590581859465408Bifidobacterium longum DJO10A, complete genomeTransposase9e-1682
NC_012803:1552122:1573850157385015749021053Micrococcus luteus NCTC 2665, complete genometransposase1e-0755.5
NC_012803:1094679:1102692110269211039541263Micrococcus luteus NCTC 2665, complete genometransposase1e-0755.5
NC_015067:1528984:154759415475941548043450Bifidobacterium longum subsp. longum JCM 1217, complete genometransposase2e-1374.3
NC_017219:1163000:117541411754141175851438Bifidobacterium longum subsp. infantis ATCC 15697, complete genometransposase2e-0961.2
NC_012803:1552122:1563481156348115647431263Micrococcus luteus NCTC 2665, complete genometransposase1e-0755.5
NC_014830:850542:8623978623978636591263Intrasporangium calvum DSM 43043 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein7e-0959.3
NC_014830:3870000:3883909388390938851711263Intrasporangium calvum DSM 43043 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein7e-0959.3