Pre_GI: BLASTP Hits

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Query: NC_014169:2353711:2365681 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 2365681, End: 2367045, Length: 1365

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:3206688:3212895321289532143041410Streptomyces scabiei 87.22 chromosome, complete genomeextracellular solute-binding lipoprotein7e-100364
NC_015690:2039215:2052584205258420539121329Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein3e-1997.1
NC_016935:2567039:2601872260187226032001329Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein1e-1894.7
NC_014652:757381:7573817573817587451365Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 13e-1583.6
NC_014364:815346:8385568385568398301275Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 11e-1481.6
NC_021182:966839:9705849705849718611278Clostridium pasteurianum BC1, complete genomeABC-type sugar transport system, periplasmic component5e-1479.3
NC_014246:1787154:1798378179837817996131236Mobiluncus curtisii ATCC 43063 chromosome, complete genomesugar ABC transporter substrate-binding protein2e-1273.9
NC_015690:7785875:7785875778587577872091335Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1170.5
NC_011899:1603500:1606126160612616075021377Halothermothrix orenii H 168, complete genomeextracellular solute-binding protein family 11e-1068.6
NC_015520:2859820:2864204286420428655201317Mahella australiensis 50-1 BON chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1068.2
UCMB5137:2054735:2092017209201720933151299Bacillus atrophaeus UCMB-5137pectin degradation byproducts-binding lipoprotein5e-0962.8
NC_003366:461602:4790084790084802761269Clostridium perfringens str. 13, complete genomehypothetical protein1e-0862
NC_014915:2149884:2155118215511821564311314Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 19e-0962
NC_013411:3010000:3015187301518730165001314Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 19e-0962
NC_009443:142500:1541291541291555561428Streptococcus suis 98HAH33, complete genomesugar ABC transporter periplasmic protein1e-0861.6
NC_009442:142500:154225154225155079855Streptococcus suis 05ZYH33 chromosome, complete genomesugar ABC transporter periplasmic protein1e-0861.6
NC_011898:1218500:1236408123640812377751368Clostridium cellulolyticum H10, complete genomeextracellular solute-binding protein family 11e-0861.2
NC_012926:140000:1543541543541556281275Streptococcus suis BM407 chromosome, complete genomeextracellular solute-binding lipoprotein2e-0861.2
NC_012924:142500:1543751543751556491275Streptococcus suis SC84, complete genomeextracellular solute-binding lipoprotein2e-0861.2
NC_012925:140000:1545701545701558441275Streptococcus suis P1/7, complete genomeextracellular solute-binding lipoprotein2e-0861.2
NC_020210:1951746:1962799196279919641211323Geobacillus sp. GHH01, complete genomeExtracellular solute-binding protein family 14e-0859.7
NC_014618:586240:5922685922685935151248Enterobacter cloacae SCF1 chromosome, complete genomeextracellular solute-binding protein4e-0859.7
NC_010572:2843589:2863797286379728650441248Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter substrate-binding protein7e-0858.9
NC_013526:439813:4662174662174677281512Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 19e-0858.5
NC_019970:336472:4140204140204153301311Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family1e-0757.8
NC_014652:2323598:2330356233035623315821227Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 12e-0757.8
NC_006087:237500:2634602634602646291170Leifsonia xyli subsp. xyli str. CTCB07, complete genomemaltose/trehalose porter4e-0756.6
NC_020291:6310000:6326586632658663278271242Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeABC-type sugar transport system, periplasmic component4e-0756.6
NC_016582:8711199:8715519871551987168381320Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative extracellular solute-binding protein5e-0756.2
NC_013714:2477638:2490253249025324915241272Bifidobacterium dentium Bd1, complete genomeSolute binding protein of ABC transporter system5e-0756.2
NC_009437:475817:4947954947954960211227Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular solute-binding protein1e-0655.1
NC_017218:31247:4968249682510551374Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeABC transporter substrate-binding protein1e-0654.7
NC_012034:438000:4587584587584599841227Anaerocellum thermophilum DSM 6725, complete genomeextracellular solute-binding protein family 11e-0654.7
NC_015949:2101302:2106691210669121079171227Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0654.3
NC_014721:373607:3913783913783926041227Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeextracellular solute-binding protein family 12e-0654.3
NC_014392:412916:4339374339374351631227Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeextracellular solute-binding protein family 12e-0654.3
NC_007516:1323105:1323105132310513243701266Synechococcus sp. CC9605, complete genomeABC transporter, likely sugar solute binding protein2e-0654.3
NC_012660:2684981:2688291268829126896011311Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transporter-like exported protein2e-0653.9
NC_015690:7334786:7334786733478673361141329Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-0653.9
NC_020134:1783000:1783007178300717843291323Clostridium stercorarium subsp. stercorarium DSM 8532, completeextracellular solute-binding protein, family 13e-0653.5
NC_008010:321561:3322443322443335061263Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceextracellular solute-binding protein, family 13e-0653.5
NC_013411:2767400:2781619278161927829831365Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 19e-0652
NC_014915:1909275:1921556192155619229171362Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 19e-0652
NC_013205:854983:8668678668678682491383Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,extracellular solute-binding protein family 19e-0652