Pre_GI: BLASTP Hits

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Query: NC_014169:231210:248707 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 248707, End: 250380, Length: 1674

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017218:273503:2909852909852926581674Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomesite-specific recombinase, phage integrase family01046
NC_014638:183115:2209422209422222941353Bifidobacterium bifidum PRL2010 chromosome, complete genomeDNA integration/recombination/inversion protein3e-72273
NC_009077:2308634:2313269231326923144351167Mycobacterium sp. JLS, complete genomephage integrase family protein4e-34146
NC_014169:231210:2508572508572522241368Bifidobacterium longum subsp. longum JDM301 chromosome, completephage integrase family protein3e-32140
NC_018750:4333064:4333064433306443342091146Streptomyces venezuelae ATCC 10712, complete genomeintegrase3e-32140
NC_003155:4592000:4614801461480146159401140Streptomyces avermitilis MA-4680, complete genomeintegrase1e-31138
NC_013510:39975:4285242852442071356Thermomonospora curvata DSM 43183, complete genomeintegrase family protein3e-31136
NC_014215:492855:5088295088295099771149Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,phage integrase1e-30134
NC_019673:1420198:1436171143617114374091239Saccharothrix espanaensis DSM 44229 complete genomeIntegrase4e-30133
NC_014830:3438504:3462341346234134634681128Intrasporangium calvum DSM 43043 chromosome, complete genomeintegrase family protein2e-27124
NC_011593:1163000:1168252116825211695951344Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phage integrase family protein4e-26119
NC_014616:1415951:1430700143070014318661167Bifidobacterium bifidum S17 chromosome, complete genomephage integrase7e-26119
NC_017955:1611037:1639314163931416404471134Modestobacter marinus, complete genomeintegrase, Lambda phage type1e-24115
NC_016948:3724390:3735349373534937365421194Mycobacterium intracellulare MOTT-64 chromosome, complete genomephage integrase family protein8e-24112
NC_015052:1313311:1323906132390613251801275Bifidobacterium longum subsp. infantis 157F, complete genomephage integrase2e-23111
NC_013721:1091901:109819510981951099166972Gardnerella vaginalis 409-05, complete genomesite-specific recombinase, phage integrase family9e-22105
NC_016948:2931285:2939178293917829402211044Mycobacterium intracellulare MOTT-64 chromosome, complete genomephage integrase family protein3e-21103
NC_017219:1163000:1168043116804311692481206Bifidobacterium longum subsp. infantis ATCC 15697, complete genomephage integrase1e-20102
NC_008726:4672850:4680971468097146820921122Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein9e-21102
NC_016906:3286384:3302810330281033039911182Gordonia polyisoprenivorans VH2 chromosome, complete genomeprophage integrase2e-20100
NC_012490:3094857:3112718311271831138811164Rhodococcus erythropolis PR4, complete genomeintegrase2e-1688.2
NC_015275:911999:9149009149009160301131Clostridium lentocellum DSM 5427 chromosome, complete genomeintegrase family protein2e-1584.7
NC_018750:3249756:3261997326199732632411245Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-1584.3
NC_008595:2215244:2220320222032022214681149Mycobacterium avium 104, complete genometraSA:integrase fusion protein3e-1584
NC_015673:1:1429114291155771287Corynebacterium resistens DSM 45100 chromosome, complete genomeIntegrase4e-1583.6
NC_008699:2418722:2443413244341324446001188Nocardioides sp. JS614, complete genomephage integrase family protein1e-1482
NC_003155:4906639:4906639490663949079551317Streptomyces avermitilis MA-4680, complete genomephage-related integrase1e-1481.6
NC_020291:3973084:3976101397610139772791179Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometyrosine recombinase XerC-like protein2e-1481.3
NC_015671:557720:5618825618825630091128Cellvibrio gilvus ATCC 13127 chromosome, complete genomeintegrase family protein3e-1480.5
NC_015434:6020178:6042495604249560437331239Verrucosispora maris AB-18-032 chromosome, complete genomeintegrase family protein2e-1377.4
NC_008278:1876435:1889515188951518907321218Frankia alni ACN14a, complete genomeIntegrase3e-1377.4
NC_017955:2494640:2529517252951725307191203Modestobacter marinus, complete genomeintegrase4e-1376.6
NC_004369:868890:8732728732728745371266Corynebacterium efficiens YS-314, complete genomeputative integrase1e-1275.1
NC_013757:3613438:363046536304653631445981Geodermatophilus obscurus DSM 43160, complete genome2e-1274.7
NC_012815:1357003:1362381136238113634811101Bifidobacterium animalis subsp. lactis DSM 10140, complete genomephage-related integrase3e-1273.9
NC_012814:1357070:1362448136244813635481101Bifidobacterium animalis subsp. lactis Bl-04, complete genomephage-related integrase3e-1273.9
NC_011835:965977:9713559713559724551101Bifidobacterium animalis subsp. lactis AD011 chromosome, completephage-related integrase3e-1273.9
NC_017214:54558:6005060050611501101Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeDNA integration/recombination/inversion protein3e-1273.9
NC_017215:1361822:1367314136731413684141101Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,DNA integration/recombination/inversion protein3e-1273.9
NC_017216:1356930:1362308136230813634081101Bifidobacterium animalis subsp. lactis BLC1, complete genomephage integrase family protein3e-1273.9
NC_017217:1362573:1367951136795113690511101Bifidobacterium animalis subsp. lactis V9 chromosome, completephage-related integrase3e-1273.9
NC_008009:1408000:1411109141110914124731365Acidobacteria bacterium Ellin345, complete genomephage integrase5e-1273.2
NC_003888:4377000:4390861439086143920001140Streptomyces coelicolor A3(2), complete genomeintegrase6e-1272.8
NC_019673:3041936:3044993304499330466181626Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-1272.8
NC_019673:8348604:836580883658088366806999Saccharothrix espanaensis DSM 44229 complete genomePhage integrase8e-1272.4
NC_013929:5248000:5267167526716752683091143Streptomyces scabiei 87.22 chromosome, complete genomeprophage integrase1e-1172
NC_014391:1910273:1918870191887019200061137Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein2e-1171.2
NC_006087:885760:9005539005539017011149Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related integrase3e-1170.5
NC_008595:2252830:2270402227040222716101209Mycobacterium avium 104, complete genomephage-related integrase3e-1170.5
NC_013170:311045:3463313463313474761146Cryptobacterium curtum DSM 15641, complete genomesite-specific recombinase XerC4e-1170.1
NC_014210:144036:1495391495391508071269Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein5e-1170.1
NC_007644:1847000:1850618185061818517901173Moorella thermoacetica ATCC 39073, complete genomePhage integrase5e-1169.7
NC_003450:1903110:1985439198543919865901152Corynebacterium glutamicum ATCC 13032, complete genomeintegrase1e-1068.6
NC_014335:2274774:229993922999392300787849Bacillus cereus biovar anthracis str. CI chromosome, completeDNA integration/recombination/invertion protein2e-1067.8
NC_012522:4299287:4304961430496143060671107Rhodococcus opacus B4, complete genomeputative integrase3e-1067
NC_013929:2375613:2400578240057824017981221Streptomyces scabiei 87.22 chromosome, complete genomephage integrase4e-1066.6
NC_014551:1872000:1877913187791318790581146Bacillus amyloliquefaciens DSM 7, complete genomephage integrase5e-1066.2
NC_016114:4210173:421631142163114216826516Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegrase7e-1066.2
NC_008699:1673181:1714744171474417158501107Nocardioides sp. JS614, complete genomephage integrase family protein7e-1065.9
NC_014964:2272413:2294058229405822951761119Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeintegrase family protein8e-1065.9
NC_017179:1683199:1683199168319916843291131Clostridium difficile BI1, complete genomeprophage lambdaba04, site-specific recombinase, phage integrase family protein1e-0965.5
NC_011593:533884:558309558309558920612Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phage integrase family protein1e-0965.5
NC_020133:5485528:5502600550260055037691170Mycobacterium liflandii 128FXT, complete genomeprophage integrase2e-0964.7
NC_014650:2969866:2987769298776929889231155Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase2e-0964.7
NC_012581:709234:731691731691732320630Bacillus anthracis str. CDC 684 chromosome, complete genomephage integrase, phage integrase family2e-0964.7
NC_002936:797110:8092918092918105981308Dehalococcoides ethenogenes 195, complete genomesite-specific recombinase, phage integrase family4e-0963.5
NC_014650:603500:6101966101966113951200Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase4e-0963.5
NC_012704:1701805:1711267171126717124901224Corynebacterium kroppenstedtii DSM 44385, complete genomeputative tyrosine recombinase/integrase family protein5e-0963.2
NC_003888:6103534:6133491613349161357972307Streptomyces coelicolor A3(2), complete genometraSA:integrase fusion protein7e-0962.8
NC_009785:387910:3914763914763926301155Streptococcus gordonii str. Challis substr. CH1, complete genomesite-specific recombinase, phage integrase family1e-0862
NC_009455:820821:8332778332778343831107Dehalococcoides sp. BAV1 chromosome, complete genomephage integrase family protein1e-0861.6
NC_018750:4311300:4317107431710743183031197Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-0861.6
NC_016582:10159486:1017303810173038101742641227Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-0861.6
NC_008711:1892881:190429619042961905210915Arthrobacter aurescens TC1, complete genomephage integrase family domain protein2e-0861.2
NC_012563:1681639:1685563168556316866121050Clostridium botulinum A2 str. Kyoto, complete genomephage integrase2e-0860.8
NC_007777:135222:1403051403051416001296Frankia sp. CcI3, complete genomephage integrase2e-0860.8
NC_013929:3986272:3990747399074739919641218Streptomyces scabiei 87.22 chromosome, complete genomeintegrase2e-0860.8
NC_013929:5952380:5954307595430759556141308Streptomyces scabiei 87.22 chromosome, complete genomephage integrase3e-0860.8
NC_007907:960104:974182974182975108927Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0860.5
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase3e-0860.5
NC_018750:5293829:5316938531693853180921155Streptomyces venezuelae ATCC 10712, complete genomephage integrase family protein4e-0860.1
NC_014210:723719:7400287400287412421215Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein4e-0860.1
NC_016884:1201868:1206857120685712080291173Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeintegrase family protein4e-0860.1
NC_015757:2459424:2470235247023524714071173Sulfobacillus acidophilus TPY chromosome, complete genomePhage integrase4e-0860.1
NC_008148:2231045:2231045223104522321811137Rubrobacter xylanophilus DSM 9941, complete genomephage integrase4e-0860.1
NC_008705:3201817:3211232321123232124551224Mycobacterium sp. KMS, complete genomephage integrase family protein4e-0860.1
NC_011830:4187362:419277141927714193703933Desulfitobacterium hafniense DCB-2, complete genomeintegrase family protein5e-0859.7
NC_014550:2314359:2319179231917923202941116Arthrobacter arilaitensis Re117, complete genomeputative phage integrase8e-0859.3
NC_016048:693416:6961846961846973111128Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase7e-0859.3
NC_008705:5144433:5149414514941451505891176Mycobacterium sp. KMS, complete genome7e-0859.3
NC_008146:5106775:5111630511163051129311302Mycobacterium sp. MCS, complete genomephage integrase8e-0858.9
NC_016111:2402891:2407266240726624083241059Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-0758.9
NC_012778:1819559:1839064183906418401581095Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-0758.9
NC_016948:678939:6847016847016858551155Mycobacterium intracellulare MOTT-64 chromosome, complete genomeprophage integrase1e-0758.9
NC_013921:1396500:1398270139827013994661197Thermoanaerobacter italicus Ab9 chromosome, complete genomeintegrase family protein1e-0758.5
NC_015977:442493:4474624474624486731212Roseburia hominis A2-183 chromosome, complete genomeintegrase family protein1e-0758.5
NC_013198:1095591:1102527110252711037111185Lactobacillus rhamnosus GG, complete genomephage protein, site-specific recombinase, integrase family1e-0758.5
NC_016048:3261166:3281077328107732822851209Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase1e-0758.5
NC_015953:1860946:1866376186637618676831308Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase family protein2e-0758.2
NC_012926:1496510:1512623151262315137651143Streptococcus suis BM407 chromosome, complete genomephage integrase2e-0758.2
NC_012924:1446190:1462283146228314634251143Streptococcus suis SC84, complete genomephage integrase2e-0758.2
NC_012925:1357783:1373875137387513750171143Streptococcus suis P1/7, complete genomephage integrase2e-0758.2
NC_020387:796253:8023368023368034931158Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, phage integrase family2e-0757.8
NC_015514:3508022:3525391352539135265331143Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase family protein2e-0757.8
NC_014721:729942:7313247313247325021179Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein2e-0757.8
NC_015576:808926:8197348197348209031170Mycobacterium sp. JDM601 chromosome, complete genomeprophage integrase2e-0757.8
NC_013441:1487058:1489298148929814904701173Gordonia bronchialis DSM 43247, complete genomeintegrase family protein2e-0757.8
NC_002662:30922:4854348543497271185Lactococcus lactis subsp. lactis Il1403, complete genomeintegrase2e-0757.8
NC_017219:538864:558171558171558713543Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative phage integrase3e-0757.4
NC_010816:2326453:233369523336952334633939Bifidobacterium longum DJO10A, complete genomeIntegrase3e-0757.4
NC_009495:1821938:1822764182276418238131050Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephage integrase3e-0757.4
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein3e-0757.4
NC_010545:11950:1672816728181191392Corynebacterium urealyticum DSM 7109, complete genomeputative integrase4e-0757
NC_013093:7437033:7455630745563074568261197Actinosynnema mirum DSM 43827, complete genomeintegrase family protein3e-0757
NC_004307:2208591:221454622145462215475930Bifidobacterium longum NCC2705, complete genomephage family integrase3e-0757
NC_015052:1771976:178718417871841788113930Bifidobacterium longum subsp. infantis 157F, complete genomephage integrase3e-0757
NC_017221:535000:541152541152542081930Bifidobacterium longum subsp. longum KACC 91563 chromosome,phage integrase3e-0757
NC_014624:1204881:122192712219271222838912Eubacterium limosum KIST612 chromosome, complete genomesite-specific recombinase XerC5e-0756.6
NC_016048:3667890:3691910369191036930701161Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase6e-0756.2
NC_010999:1245239:1248554124855412497381185Lactobacillus casei, complete genomeIntegrase7e-0756.2
NC_017337:321155:3211553211553223601206Staphylococcus aureus subsp. aureus ED133 chromosome, completeputative prophage integrase8e-0755.8
NC_002951:351029:3547853547853559901206Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, integrase9e-0755.8
NC_014814:1425500:1434223143422314354341212Mycobacterium sp. Spyr1 chromosome, complete genomesite-specific recombinase XerD1e-0655.5
NC_014623:1600360:1600360160036016015471188Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein1e-0655.1
NC_016109:3591401:3623160362316036244791320Kitasatospora setae KM-6054, complete genomehypothetical protein1e-0655.1
NC_015558:1389369:1411494141149414125911098Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative integrase - phage associated2e-0655.1
NC_016947:666627:6723846723846734751092Mycobacterium intracellulare MOTT-02 chromosome, complete genomeprophage integrase2e-0654.7
NC_015573:1573621:1574928157492815760401113Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein2e-0654.7
NC_008825:564392:5822395822395832431005Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-0654.7
NC_014624:3463272:348210034821003483014915Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-0654.7
NC_017904:666285:6702366702366713931158Mycobacterium sp. MOTT36Y chromosome, complete genomeprophage integrase2e-0654.3
NC_011768:1718869:1778114177811417793671254Desulfatibacillum alkenivorans AK-01, complete genomeintegrase family protein3e-0653.9
NC_019897:3057000:3064727306472730658631137Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD3e-0653.9
NC_016935:1636278:1644157164415716453111155Paenibacillus mucilaginosus 3016 chromosome, complete genometyrosine recombinase XerC3e-0653.9
NC_015656:381554:3852123852123865521341Frankia symbiont of Datisca glomerata chromosome, complete genomeintegrase family protein3e-0653.9
NC_013757:3100515:3113794311379431149271134Geodermatophilus obscurus DSM 43160, complete genomeintegrase family protein3e-0653.9
NC_014624:2996377:3006993300699330081321140Eubacterium limosum KIST612 chromosome, complete genomephage integrase family site specific recombinase6e-0653.1
NC_014623:2418762:2452315245231524535021188Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein7e-0652.8
NC_015957:8777644:8782868878286887841331266Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase family protein1e-0552.4