Pre_GI: BLASTP Hits

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Query: NC_014169:1784435:1795590 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1795590, End: 1796786, Length: 1197

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017221:535000:5462305462305474921263Bifidobacterium longum subsp. longum KACC 91563 chromosome,restriction endonuclease S subunit3e-112405
NC_014169:1784435:1800006180000618010341029Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease S subunit5e-106384
NC_011830:4187362:4191475419147541926951221Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein5e-64245
NC_014328:303063:3449343449343461871254Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, specificity subunit1e-62240
NC_014638:1333976:1345578134557813468191242Bifidobacterium bifidum PRL2010 chromosome, complete genomerestriction endonuclease S subunit5e-57221
NC_004307:2208591:2219603221960322208231221Bifidobacterium longum NCC2705, complete genomeHsdS specificity protein of type I restriction-modification system5e-56218
NC_008054:899441:9101449101449113791236Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit1e-54214
NC_014616:1296287:1306098130609813073361239Bifidobacterium bifidum S17 chromosome, complete genomeHsdS-like protein of Type I restriction-modification system1e-54214
NC_014562:3985500:3997879399787939990151137Pantoea vagans C9-1 chromosome, complete genometype I restriction-modification system specificty subunit1e-54214
NC_010816:2326453:2338749233874923399901242Bifidobacterium longum DJO10A, complete genomeRestriction endonuclease S subunit2e-54213
NC_015052:1771976:1781878178187817830351158Bifidobacterium longum subsp. infantis 157F, complete genomerestriction-modification system specificity subunit3e-43176
NC_015634:2595500:2612515261251526136931179Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein2e-38160
NC_013037:6281164:6322095632209563233631269Dyadobacter fermentans DSM 18053, complete genomerestriction modification system DNA specificity domain1e-36154
NC_016584:1998000:2044072204407220453071236Desulfosporosinus orientis DSM 765 chromosome, complete genomerestriction endonuclease S subunit9e-36151
NC_020450:875757:8959428959428971441203Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme, S subunit4e-35149
NC_019904:5308998:531281753128175313734918Echinicola vietnamensis DSM 17526 chromosome, complete genomerestriction endonuclease S subunit7e-33141
NC_013199:845000:8452258452258464061182Lactobacillus rhamnosus Lc 705, complete genometype I restriction modification system DNA specificity domain, enzyme S protein (hsdS)2e-32140
NC_015703:4483500:4499204449920445014052202Runella slithyformis DSM 19594 chromosome, complete genometype I restriction-modification system, M subunit1e-31137
NC_017068:1143515:1184538118453811857701233Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction enzyme, specificity subunit7e-31135
NC_016023:1959255:1968791196879119699301140Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein9e-30131
NC_014323:5219154:5228943522894352302081266Herbaspirillum seropedicae SmR1 chromosome, complete genomeType I site-specific deoxyribonuclease specificity subunit2e-29130
NC_005139:796546:8174068174068187071302Vibrio vulnificus YJ016 chromosome I, complete sequencerestriction endonuclease S subunit4e-27122
NC_009665:2602000:2614480261448026157631284Shewanella baltica OS185 chromosome, complete genomerestriction modification system DNA specificity subunit5e-27122
NC_016026:1224129:1234454123445412357431290Micavibrio aeruginosavorus ARL-13 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein3e-26120
NC_009832:4521585:4538281453828145395101230Serratia proteamaculans 568, complete genomerestriction modification system DNA specificity domain9e-26118
NC_009953:3224412:3233728323372832349661239Salinispora arenicola CNS-205 chromosome, complete genomerestriction endonuclease S subunits-like protein1e-24114
NC_014219:192555:2130542130542142891236Bacillus selenitireducens MLS10 chromosome, complete genomerestriction modification system DNA specificity domain protein8e-24111
NC_014550:2562053:2590617259061725918701254Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system specificity subunit7e-24111
NC_009943:272158:2834502834502846311182Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain5e-23108
NC_006270:741731:7518027518027529951194Bacillus licheniformis ATCC 14580, complete genomeHsdIB1e-21104
NC_006322:741516:7515867515867527791194Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-21104
NC_008054:899441:9123779123779135401164Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit2e-20100
NC_017338:436711:4382604382604394951236Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetype I restriction modification system, site specificity determination subunit, HsdS_13e-2099.8
NC_010581:2999002:3041441304144130426881248Beijerinckia indica subsp. indica ATCC 9039, complete genomerestriction modification system DNA specificity domain5e-2099.4
NC_011830:4187362:4193726419372641949671242Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein1e-1998.2
NC_009052:4335754:4345846434584643471291284Shewanella baltica OS155, complete genomerestriction modification system DNA specificity domain1e-1997.8
NC_012881:1802000:1822804182280418240061203Desulfovibrio salexigens DSM 2638, complete genomerestriction modification system DNA specificity domain protein5e-1892.4
NC_014727:995480:1006396100639610075681173Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type-i specificity determinant subunit1e-1791.3
NC_015500:484984:5002385002385014611224Treponema brennaborense DSM 12168 chromosome, complete genomerestriction modification system DNA specificity domain protein6e-1789
NC_014216:2334568:2339611233961123409301320Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity domain protein6e-1789
NC_009434:695582:742517742517742990474Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit, truncation7e-1788.6
NC_008271:140846:1461601461601473351176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencetype I restriction-modification system specificity subunit7e-1788.6
NC_014727:995480:1008566100856610097111146Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,restriction endonuclease s subunits-like protein6e-1685.5
NC_013170:311045:352409352409353035627Cryptobacterium curtum DSM 15641, complete genomehypothetical protein1e-1584.7
NC_009801:2898426:2914257291425729153781122Escherichia coli E24377A, complete genomeputative type I restriction-modification system, S subunit4e-1582.8
NC_008786:3915000:392474739247473925637891Verminephrobacter eiseniae EF01-2, complete genomerestriction modification system DNA specificity domain1e-1481.3
NC_009434:281474:2873472873472886121266Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit2e-1480.5
NC_010645:369408:3960523960523972901239Bordetella avium 197N, complete genomerestriction modification system, specificity subunit4e-1479.7
NC_010545:1475410:1490965149096514922001236Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, specificity subunit1e-1378.2
NC_003902:555699:5640055640055652971293Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative restriction modification system specificity subunit1e-1377.8
NC_007086:557789:5660955660955673871293Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction modification system specificity subunit1e-1377.8
NC_015635:4864349:4880217488021748814341218Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system specificity subunit6e-1375.5
NC_008740:443274:4727574727574740761320Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain2e-1273.9
NC_018528:1932000:196291319629131963773861Lactobacillus helveticus R0052 chromosome, complete genometype I restriction endonuclease S subunit6e-1272.4
NC_016589:183432:2040932040932054061314Burkholderia sp. YI23 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein6e-1272.4
NC_010571:1334000:1344968134496813462811314Opitutus terrae PB90-1, complete genomerestriction modification system DNA specificity domain7e-1272
NC_019907:773944:782100782100782702603Liberibacter crescens BT-1 chromosome, complete genomeType I restriction-modification system, specificity subunit S4e-1169.3
NC_014618:690056:7105557105557117391185Enterobacter cloacae SCF1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1066.6
NC_010682:460523:4806054806054819121308Ralstonia pickettii 12J chromosome 1, complete sequencerestriction modification system DNA specificity domain4e-1066.2
NC_020302:744956:759284759284759622339Corynebacterium halotolerans YIM 70093 = DSM 44683, completetype IC specificity subunit4e-1066.2
NC_004757:427483:4375654375654389051341Nitrosomonas europaea ATCC 19718, complete genomeRestriction modification system, type I5e-1065.9
NC_008541:1042322:1066991106699110681631173Arthrobacter sp. FB24 chromosome 1, complete sequencerestriction modification system DNA specificity domain6e-1065.5
NC_013440:3813132:3832106383210638333771272Haliangium ochraceum DSM 14365, complete genomerestriction modification system DNA specificity domain protein1e-0964.7
NC_006513:1547092:1555046155504615563201275Azoarcus sp. EbN1, complete genomerestriction modification system specificity subunit2e-0964.3
NC_008344:554229:5639575639575652251269Nitrosomonas eutropha C91, complete genomerestriction modification system DNA specificity domain2e-0963.9
NC_017278:258921:279639279639280349711Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein2e-0963.9
NC_006270:4149004:4166525416652541676881164Bacillus licheniformis ATCC 14580, complete genomeHsdS5e-0962.4
NC_006322:4149500:4166640416664041678031164Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-0962.4
NC_015222:3137167:3144490314449031457521263Nitrosomonas sp. AL212 chromosome, complete genomerestriction modification system DNA specificity domain1e-0861.6
NC_018645:13408:2450224502257221221Desulfobacula toluolica Tol2, complete genometype-1 restriction enzyme EcoKI specificity protein1e-0861.6
NC_011832:1122268:113248811324881133105618Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein2e-0860.5
NC_006448:1451729:147383914738391474144306Streptococcus thermophilus LMG 18311, complete genometype I restriction-modification system specificty subunit, truncated7e-0858.5
NC_016620:781995:7957407957407969781239Bacteriovorax marinus SJ, complete genomeputative type I restriction enzyme specificity protein1e-0757.8
NC_007413:1405817:1418019141801914193831365Anabaena variabilis ATCC 29413, complete genomeRestriction modification system DNA specificity domain4e-0756.2
NC_014414:1104386:1119888111988811210871200Parvularcula bermudensis HTCC2503 chromosome, complete genometype I restriction-modification system specificity subunit7e-0755.5
NC_015953:4746983:4757318475731847586491332Streptomyces sp. SirexAA-E chromosome, complete genomeRestriction endonuclease S subunits-like protein1e-0655.1
NC_013943:2705983:2714857271485727160741218Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0654.7
NC_007404:2743877:2758249275824927594511203Thiobacillus denitrificans ATCC 25259, complete genomeputative restriction endonuclease S subunit2e-0653.9
NC_015660:1918307:1937843193784319390361194Geobacillus thermoglucosidasius C56-YS93 chromosome, completerestriction modification system DNA specificity domain-containing protein4e-0652.8
NC_009523:907775:9102129102129113901179Roseiflexus sp. RS-1 chromosome, complete genomerestriction modification system DNA specificity subunit8e-0652
NC_007759:2097734:2114849211484921160631215Syntrophus aciditrophicus SB, complete genometype I restriction-modification system specificity subunit9e-0651.6