Pre_GI: BLASTP Hits

Some Help

Query: NC_014169:1784435:1790719 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1790719, End: 1794009, Length: 3291

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017221:535000:5490715490715523613291Bifidobacterium longum subsp. longum KACC 91563 chromosome,HsdR-like protein of type I restriction modification system02142
NC_004307:2208591:2222402222240222256893288Bifidobacterium longum NCC2705, complete genomeHsdR-like protein of type I restriction modification system02115
NC_010816:2326453:2341549234154923448363288Bifidobacterium longum DJO10A, complete genomeType I site-specific restriction-modification system R subunit02087
NC_015052:1771976:1777032177703217803193288Bifidobacterium longum subsp. infantis 157F, complete genomedeoxyribonuclease02087
NC_014638:1333976:1340750134075013440193270Bifidobacterium bifidum PRL2010 chromosome, complete genomeHsdR-like protein type I restriction modification system02020
NC_014616:1296287:1301270130127013045393270Bifidobacterium bifidum S17 chromosome, complete genomeHsdR-like protein of Type I restriction-modification system02014
NC_010645:369408:3929003929003960343135Bordetella avium 197N, complete genomerestriction-modification system, endonuclease subunit01171
NC_014323:5219154:5225775522577552289243150Herbaspirillum seropedicae SmR1 chromosome, complete genomeHsdR-like type I restriction modification system protein01165
NC_009832:4521585:4539525453952545427103186Serratia proteamaculans 568, complete genometype I site-specific deoxyribonuclease, HsdR family01130
NC_014562:3985500:3994631399463139978643234Pantoea vagans C9-1 chromosome, complete genometype I restriction enzyme R protein01117
NC_014328:303063:3461993461993501553957Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, endonuclease subunit01086
NC_010545:1475410:1487761148776114909553195Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, restriction subunit01086
NC_020302:744956:7596427596427628213180Corynebacterium halotolerans YIM 70093 = DSM 44683, completeHsdR family type I site-specific deoxyribonuclease0702
NC_015634:2595500:2609416260941626124993084Bacillus coagulans 2-6 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family6e-100366
NC_016023:1959255:1969946196994619730293084Bacillus coagulans 36D1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease6e-100366
NC_007681:542494:5593295593295620372709Methanosphaera stadtmanae DSM 3091, complete genomeputative type I restriction-modification system, restriction subunit2e-95351
NC_020450:875757:8913718913718943582988Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme R protein2e-93344
NC_017068:1143515:1186826118682611898583033Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system R subunit2e-90335
NC_014727:995480:1001764100176410047843021Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hsdr-type i restriction subunit2e-90335
NC_009706:2673906:2673906267390626771153210Clostridium kluyveri DSM 555 chromosome, complete genomeType I restriction enzyme, endonuclease subunit9e-91335
NC_011837:2605409:2605409260540926086183210Clostridium kluyveri NBRC 12016, complete genomehypothetical protein9e-91335
NC_014219:192555:2143022143022174663165Bacillus selenitireducens MLS10 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-90334
NC_020164:89214:1035451035451063402796Staphylococcus warneri SG1, complete genometype I site-specific restriction-modification system restriction subunit2e-88327
NC_014634:28690:4845948459512632805Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequencetype I site-specific deoxyribonuclease, HsdR family2e-88327
NC_016584:1998000:2039833203983320430423210Desulfosporosinus orientis DSM 765 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease9e-88325
NC_008054:899441:9055129055129085323021Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, restriction subunit4e-85317
NC_006270:741731:7530187530187561763159Bacillus licheniformis ATCC 14580, complete genomeHsdRI3e-85317
NC_006322:741516:7528027528027559603159Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-85317
NC_020054:4161049:4175461417546141783312871Fibrella aestuarina BUZ 2 drat genometype I restriction enzyme, R subunit3e-84313
NC_005090:1082213:1086874108687410896932820Wolinella succinogenes DSM 1740, complete genomeHSDR PROTEIN PROBABLE TYPE I RESTRICTION ENZYME RESTRICTIONCHAIN9e-84312
NC_014618:690056:7075817075817104962916Enterobacter cloacae SCF1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease5e-81303
NC_014752:1530000:1533219153321915363173099Neisseria lactamica ST-640, complete genome6e-80300
NC_017515:1429317:1434025143402514371233099Neisseria meningitidis M04-240196 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-79297
NC_017516:1439775:1442427144242714451922766Neisseria meningitidis H44/76 chromosome, complete genome6e-79296
NC_003112:844000:8588708588708616352766Neisseria meningitidis MC58, complete genomeputative type I restriction enzyme EcoR124II R protein6e-79296
NC_016026:1224129:1236374123637412392052832Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeputative type I restriction enzyme R protein8e-79296
NC_016940:271500:2841372841372869472811Saprospira grandis str. Lewin chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease7e-78293
NC_015703:4483500:4501508450150845043452838Runella slithyformis DSM 19594 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-77291
NC_013037:6281164:6318483631848363214072925Dyadobacter fermentans DSM 18053, complete genometype I site-specific deoxyribonuclease, HsdR family2e-76288
NC_017514:1396000:1399124139912414022553132Neisseria meningitidis M01-240149 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-75284
NC_017505:841496:8555268555268586573132Neisseria meningitidis alpha710 chromosome, complete genomeputative type I restriction enzyme EcoR124II R protein2e-75284
NC_012912:1053618:1077362107736210803342973Dickeya zeae Ech1591, complete genometype I site-specific deoxyribonuclease, HsdR family3e-75284
NC_011601:4856717:4862628486262848657443117Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype I restriction-modification enzyme R subunit3e-75284
NC_011830:4187362:4196584419658441997123129Desulfitobacterium hafniense DCB-2, complete genometype I site-specific deoxyribonuclease, HsdR family4e-75283
NC_016514:506611:5193375193375224563120Enterobacter cloacae EcWSU1 chromosome, complete genometype I restriction enzyme R protein7e-75283
NC_005139:796546:8143278143278174133087Vibrio vulnificus YJ016 chromosome I, complete sequencetype I site-specific restriction-modification system, R (restriction) subunit1e-74282
NC_009053:313779:3226483226483257853138Actinobacillus pleuropneumoniae L20, complete genomeputative type I site-specific restriction-modification system, R (restriction) subunit1e-74282
NC_016838:85487:97669976691001642496Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,putative type I restriction-modification enzyme R subunit8e-75282
NC_010939:321492:3322653322653353993135Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative type I site-specific restriction- modification system, R (restriction) subunit2e-74281
NC_015761:299386:3128843128843159913108Salmonella bongori NCTC 12419, complete genometype I restriction enzyme4e-74280
NC_010278:315941:3274473274473305843138Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,type I site-specific deoxyribonuclease4e-74280
NC_008786:3915000:3927676392767639306302955Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family1e-73278
NC_013949:939695:9506209506209536493030Helicobacter mustelae 12198 chromosome, complete genometype I restriction-modification system restriction enzyme2e-73278
NC_016012:665171:6761916761916794063216Candidatus Arthromitus sp. SFB-rat-Yit, complete genometype I site-specific deoxyribonuclease, HsdR family3e-73277
NC_017033:678321:6880396880396911403102Frateuria aurantia DSM 6220 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease8e-73276
NC_007086:557789:5631145631145660982985Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction-modification system endonuclease2e-72275
NC_003902:555699:5610245610245640082985Xanthomonas campestris pv. campestris str. ATCC 33913, completetype I restriction-modification system endonuclease2e-72275
NC_009052:4335754:4348197434819743512683072Shewanella baltica OS155, complete genometype I site-specific deoxyribonuclease, HsdR family1e-72275
NC_007508:570000:5737155737155766992985Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (restriction subunit)3e-72274
NC_014655:1396672:1400184140018414032823099Leadbetterella byssophila DSM 17132 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family5e-72273
NC_007778:3470661:3480367348036734834833117Rhodopseudomonas palustris HaA2, complete genometype I site-specific deoxyribonuclease, HsdR family9e-72272
NC_008571:744500:7519097519097549113003Gramella forsetii KT0803, complete genometype I restriction-modification system restricti on subunit9e-72272
NC_014815:6616500:6668095666809566712143120Micromonospora sp. L5 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family1e-71272
NC_005823:1105524:1118133111813311212313099Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130type I restriction enzyme1e-71272
NC_018604:1292889:1292889129288912959963108Brachyspira pilosicoli WesB complete genometype-I restriction endonuclease R subunit HsdR2e-71271
NC_018607:1505908:1515795151579515182542460Brachyspira pilosicoli B2904 chromosome, complete genometype-I restriction endonuclease R subunit HsdR4e-71270
NC_012491:743883:7553787553787584763099Brevibacillus brevis NBRC 100599, complete genometype I restriction modification system endonuclease7e-71269
NC_015565:2408669:2418136241813624212373102Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetype I site-specific deoxyribonuclease, HsdR family1e-70268
NC_008786:2729635:2740582274058227436323051Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family2e-70268
NC_014330:169862:1847931847931878673075Brachyspira pilosicoli 95/1000 chromosome, complete genometype-I restriction endonuclease R subunit HsdR3e-70267
NC_014638:183115:2129242129242159683045Bifidobacterium bifidum PRL2010 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease7e-70266
NC_015144:47783:8051080510836113102Weeksella virosa DSM 16922 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-69265
NC_015437:767572:7808307808307838893060Selenomonas sputigena ATCC 35185 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-69265
NC_010645:558974:5646425646425677433102Bordetella avium 197N, complete genometype I restriction enzyme EcoR124II R protein3e-69264
NC_014371:1218813:1238617123861712414602844Prevotella melaninogenica ATCC 25845 chromosome chromosome II,type I site-specific deoxyribonuclease, HsdR family4e-69263
NC_012669:549500:5549985549985580453048Beutenbergia cavernae DSM 12333, complete genometype I site-specific deoxyribonuclease, HsdR family6e-69263
NC_006513:1547092:1556324155632415593563033Azoarcus sp. EbN1, complete genomeType I restriction-modification system endonuclease8e-68259
NC_014314:212579:2213412213412243913051Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeHsdR family type I site-specific deoxyribonuclease9e-68259
NC_008699:1132790:1169096116909611721373042Nocardioides sp. JS614, complete genometype I site-specific deoxyribonuclease, HsdR family2e-66255
NC_014215:142500:1547171547171577553039Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-64248
NC_014448:414784:4202474202474238103564Mycoplasma hyorhinis HUB-1 chromosome, complete genomeType I site-specific deoxyribonuclease, HsdR family5e-64246
NC_014970:530748:5415305415305444782949Mycoplasma haemofelis str. Langford 1, complete genometype I restriction-modification system endonuclease, R subunit4e-59230
NC_010571:1334000:1346278134627813493553078Opitutus terrae PB90-1, complete genometype I site-specific deoxyribonuclease, HsdR family1e-51206
NC_015222:3137167:3146394314639431500143621Nitrosomonas sp. AL212 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-50202
NC_010682:460523:4776464776464806152970Ralstonia pickettii 12J chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family8e-51202
NC_006270:4149004:4163372416337241664793108Bacillus licheniformis ATCC 14580, complete genomeputative Type I site-specific deoxyribonuclease HsdR7e-47190
NC_006322:4149500:4163487416348741665943108Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-47190
NC_016023:267581:2811592811592842663108Bacillus coagulans 36D1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-46188
NC_016023:1923170:1933430193343019365373108Bacillus coagulans 36D1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease9e-46186
NC_016589:183432:2053962053962084733078Burkholderia sp. YI23 chromosome 1, complete sequenceHsdR family type I site-specific deoxyribonuclease1e-44182
NC_007575:973559:9886579886579917493093Sulfurimonas denitrificans DSM 1251, complete genomeType I site-specific deoxyribonuclease HsdR1e-44182
NC_008601:753221:7532217532217563313111Francisella tularensis subsp. novicida U112, complete genometype I restriction-modification system, subunit R (restriction)3e-44181
NC_017187:814940:8294958294958326533159Arcobacter butzleri ED-1, complete genomedeoxyribonuclease4e-44180
NC_018604:2579000:2606937260693726100713135Brachyspira pilosicoli WesB complete genometype I site-specific deoxyribonuclease HsdR1e-43179
NC_010581:2999002:3042685304268530457683084Beijerinckia indica subsp. indica ATCC 9039, complete genometype I site-specific deoxyribonuclease, HsdR family4e-41171
NC_012440:1215838:1223563122356312267243162Persephonella marina EX-H1, complete genometype I restriction enzyme R protein (HsdR)2e-40168
NC_015942:2213710:2230085223008522331623078Acidithiobacillus ferrivorans SS3 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-39164
NC_014216:2334568:2347674234767423508863213Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-39164
NC_013929:3299736:3328881332888133319673087Streptomyces scabiei 87.22 chromosome, complete genometype I restriction protein6e-39163
NC_008529:906576:964665964665965621957Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete2e-38161
NC_008529:887008:893797893797894753957Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete2e-38161
NC_021184:207492:2087402087402117933054Desulfotomaculum gibsoniae DSM 7213, complete genometype I site-specific deoxyribonuclease, HsdR family4e-38160
NC_007164:1434305:1469838146983814729243087Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, restriction enzyme2e-37159
NC_011901:1860887:1886648188664818897733126Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system restriction subunit9e-38159
NC_003901:2727361:2732159273215927352873129Methanosarcina mazei Go1, complete genometype I restriction-modification system restriction subunit8e-38159
NC_012917:985617:1000970100097010040653096Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype I site-specific deoxyribonuclease, HsdR family8e-37156
NC_014550:2562053:2587519258751925906203102Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system restriction subunit2e-36154
NC_012779:3316877:3328524332852433316193096Edwardsiella ictaluri 93-146, complete genometype I restriction enzyme R protein (HsdR)3e-36154
NC_013508:3188978:3236284323628432393793096Edwardsiella tarda EIB202, complete genometype I site-specific deoxyribonuclease, HsdR family3e-36154
NC_011283:5011497:5014646501464650177413096Klebsiella pneumoniae 342 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease5e-36154
NC_015581:680460:6804606804606835583099Thioalkalimicrobium cyclicum ALM1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-36153
NC_016803:2431672:2444040244404024472193180Desulfovibrio desulfuricans ND132 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease8e-36153
NC_011601:1114104:1150984115098411540793096Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease6e-36153
NC_014814:3892000:3904593390459339076793087Mycobacterium sp. Spyr1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-35152
NC_013720:1382561:1399580139958014026423063Pirellula staleyi DSM 6068, complete genometype I site-specific deoxyribonuclease, HsdR family2e-35152
NC_016590:1380092:1387475138747513905613087Burkholderia sp. YI23 chromosome 3, complete sequenceHsdR family type I site-specific deoxyribonuclease1e-34149
NC_021064:793098:8054238054238085783156Propionibacterium avidum 44067, complete genomeHsdR family type I site-specific deoxyribonuclease1e-34149
NC_012778:1573847:1585790158579015889693180Eubacterium eligens ATCC 27750, complete genometype I restriction enzyme, R subunit1e-34149
NC_009943:272158:2740102740102771263117Candidatus Desulfococcus oleovorans Hxd3, complete genometype I site-specific deoxyribonuclease, HsdR family2e-34149
NC_015635:4864349:4877119487711948802203102Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system restriction subunit2e-34149
NC_014934:3786132:3795481379548137985853105Cellulophaga algicola DSM 14237 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family4e-34147
NC_019902:1863162:1865231186523118683473117Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, restriction subunit R3e-34147
NC_019977:1353332:1364126136412613672573132Methanomethylovorans hollandica DSM 15978, complete genometype I site-specific deoxyribonuclease, HsdR family1e-33146
NC_017271:1289278:1299052129905213021743123Xanthomonas campestris pv. raphani 756C chromosome, completetype I restriction-modification system restriction subunit1e-33145
NC_009633:4097536:4139932413993241430573126Alkaliphilus metalliredigens QYMF chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-33145
NC_009665:2602000:2619809261980926230003192Shewanella baltica OS185 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease5e-33144
NC_015865:229883:2364722364722394202949Thermococcus sp. 4557 chromosome, complete genomeType I restriction-modification system restriction subunit R5e-33144
NC_013235:5127148:5140644514064451437303087Nakamurella multipartita DSM 44233, complete genometype I site-specific deoxyribonuclease, HsdR family1e-32142
NC_010994:859500:8752208752208782883069Rhizobium etli CIAT 652, complete genomeprobable type I restriction-modification system protein, restriction subunit8e-32140
NC_016051:1005188:1015085101508510180362952Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system restriction subunit R4e-32140
NC_015320:1690047:1692564169256416954522889Archaeoglobus veneficus SNP6 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-30135
NC_015161:1556766:1587325158732515906483324Deinococcus proteolyticus MRP chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-30135
NC_009033:755226:7623997623997654613063Staphylothermus marinus F1, complete genometype I site-specific deoxyribonuclease, HsdR family1e-29133
NC_013592:446092:4567674567674600513285Dickeya dadantii Ech586, complete genometype I site-specific deoxyribonuclease, HsdR family2e-28128
NC_010617:558954:5720755720755752093135Kocuria rhizophila DC2201, complete genometype I restriction enzyme R protein3e-28128
NC_018876:2151226:2157605215760521608053201Methanolobus psychrophilus R15 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-28127
NC_018867:1407163:1439736143973614429303195Dehalobacter sp. CF chromosome, complete genomeType I restriction-modification system, restriction subunit R1e-27126
NC_018721:943801:9515369515369545383003Psychroflexus torquis ATCC 700755 chromosome, complete genomeType I restriction-modification system, restriction subunit HsdR2e-27125
NC_016620:781995:7969917969918002093219Bacteriovorax marinus SJ, complete genomeputative type I restriction enzyme1e-27125
NC_015966:1661329:1664443166444316676553213Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease7e-27123
NC_013440:3813132:3833374383337438364123039Haliangium ochraceum DSM 14365, complete genometype I site-specific deoxyribonuclease, HsdR family2e-26122
NC_006672:47610:6310163101663973297Gluconobacter oxydans 621H plasmid pGOX1, complete sequencePutative type I restriction enzyme4e-26120
NC_011886:1176238:1202179120217912054033225Arthrobacter chlorophenolicus A6, complete genometype I site-specific deoxyribonuclease, HsdR family5e-26120
NC_016147:2337244:2345134234513423479442811Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction enzyme type I helicase subunits-related helicase8e-26120
NC_009524:1369395:1369395136939513727183324Psychrobacter sp. PRwf-1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease8e-26120
NC_008344:554229:5591105591105623283219Nitrosomonas eutropha C91, complete genometype I site-specific deoxyribonuclease, HsdR family protein2e-25119
NC_007677:1354500:1385496138549613886453150Salinibacter ruber DSM 13855, complete genomeHsdR1e-25119
NC_008541:1042322:1063872106387210669943123Arthrobacter sp. FB24 chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family2e-25118
NC_003902:3430051:3446731344673134500213291Xanthomonas campestris pv. campestris str. ATCC 33913, completeHsdR protein4e-25117
NC_007086:1457531:1460771146077114640613291Xanthomonas campestris pv. campestris str. 8004, complete genomeHsdR protein4e-25117
NC_012881:3004784:3004784300478430079153132Desulfovibrio salexigens DSM 2638, complete genometype I site-specific deoxyribonuclease, HsdR family4e-25117
NC_009076:75535:9256692566958353270Burkholderia pseudomallei 1106a chromosome I, complete sequencetype I site-specific deoxyribonuclease HsdR6e-25117
NC_010688:1435694:1438913143891314422033291Xanthomonas campestris pv. campestris, complete genometype I site-specific deoxyribonuclease1e-24116
NC_011884:3099488:3114437311443731175983162Cyanothece sp. PCC 7425, complete genometype I site-specific deoxyribonuclease, HsdR family1e-24116
NC_015580:293803:2998742998743030143141Novosphingobium sp. PP1Y, complete genomeputative type I restriction-modification system HsdR1e-24115
NC_020541:4122852:4145366414536641485813216Rhodanobacter sp. 2APBS1, complete genometype I site-specific deoxyribonuclease, HsdR family1e-24115
NC_010175:2488000:2497678249767825008123135Chloroflexus aurantiacus J-10-fl, complete genometype I site-specific deoxyribonuclease, HsdR family3e-24114
NC_007651:3064530:3147581314758131507363156Burkholderia thailandensis E264 chromosome I, complete sequencetype I restriction-modification system endonuclease4e-24114
NC_014217:2760898:2767311276731127705263216Starkeya novella DSM 506 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family7e-24113
NC_015676:1530000:1546589154658915497533165Methanosalsum zhilinae DSM 4017 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-23112
NC_015847:808931:8206928206928237903099Methanococcus maripaludis XI chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-23112
NC_004757:2730057:2762574276257427655733000Nitrosomonas europaea ATCC 19718, complete genomeRestriction enzyme type I helicase subunits and related helicases2e-23112
NC_013943:2705983:2717489271748927205753087Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-23112
NC_008782:3800500:3806730380673038097323003Acidovorax sp. JS42, complete genometype I site-specific deoxyribonuclease, HsdR family3e-23111
NC_015740:3631326:3636307363630736394083102Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype I restriction-modification enzyme, R subunit5e-23110
NC_007498:3399478:3413541341354134164952955Pelobacter carbinolicus DSM 2380, complete genomeR (restriction) subunit/helicase6e-23110
NC_002937:1764117:1777728177772817810273300Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetype I restriction-modification enzyme, R subunit7e-23110
NC_009801:2898426:2915437291543729186763240Escherichia coli E24377A, complete genometype I site-specific deoxyribonuclease, HsdR family8e-23110
NC_008346:2579756:2597163259716326003483186Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system, R subunit2e-22109
NC_009523:341347:3564713564713595573087Roseiflexus sp. RS-1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-22109
NC_014365:2810405:2829464282946428324182955Desulfarculus baarsii DSM 2075 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-22109
NC_008786:3323167:3360938336093833641503213Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family1e-22109
NC_008609:1976403:1993572199357219966523081Pelobacter propionicus DSM 2379, complete genometype I site-specific deoxyribonuclease, HsdR family1e-22109
NC_007760:2611608:2624845262484526279853141Anaeromyxobacter dehalogenans 2CP-C, complete genometype I site-specific deoxyribonuclease, HsdR family9e-23109
NC_013799:1:1291912919160863168Hydrogenobacter thermophilus TK-6, complete genometype I restriction-modification system R subunit3e-22108
NC_017161:1:1298012980161473168Hydrogenobacter thermophilus TK-6 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-22108
NC_011185:37922:4789947899509853087Vibrio fischeri MJ11 plasmid pMJ100, complete sequencetype I site-specific deoxyribonuclease2e-22108
NC_020210:1275031:1286489128648912895543066Geobacillus sp. GHH01, complete genomeputative type I restriction enzyme HindVIIP R protein2e-22108
NC_002163:1471517:1479390147939014824853096Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative type I restriction enzyme R protein2e-22108
NC_009778:567000:5863505863505894813132Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-22107
NC_007356:51080:9336693366963502985Dehalococcoides sp. CBDB1, complete genomerestriction enzyme type I helicase subunit6e-22107
NC_014650:1893758:1912565191256519156273063Geobacillus sp. Y4.1MC1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family6e-22107
NC_020260:603796:6153756153756185063132Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-22107
NC_014210:3671495:3686800368680036900573258Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,type I site-specific deoxyribonuclease, HsdR family4e-22107
NC_014002:1061501:1072360107236010752572898Methanohalophilus mahii DSM 5219 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family9e-22106
NC_015660:1918307:1939072193907219421373066Geobacillus thermoglucosidasius C56-YS93 chromosome, completetype I site-specific deoxyribonuclease, HsdR family9e-22106
NC_007948:1972290:2004590200459020076943105Polaromonas sp. JS666, complete genometype I site-specific deoxyribonuclease, HsdR family1e-21106
NC_017093:7255652:7267831726783172710493219Actinoplanes missouriensis 431, complete genomeputative restriction-modification system endonuclease1e-21106
NC_015696:285456:2978402978403009893150Francisella sp. TX077308 chromosome, complete genometype I restriction-modification system, R subunit3e-21105
NC_015587:90539:99184991841023513168Hydrogenobaculum sp. SHO chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-21105
NC_020411:90538:99183991831023503168Hydrogenobaculum sp. HO, complete genometype I site-specific deoxyribonuclease, HsdR family2e-21105
NC_015557:90503:99148991481023153168Hydrogenobaculum sp. 3684 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-21105
NC_008009:4421992:4435635443563544387243090Acidobacteria bacterium Ellin345, complete genometype I site-specific deoxyribonuclease, HsdR family2e-21105
NC_016613:2596464:2610213261021326134403228Vibrio sp. EJY3 chromosome 1, complete sequenceHsdR family type I site-specific deoxyribonuclease2e-21105
NC_014011:472650:4821084821084853023195Aminobacterium colombiense DSM 12261 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-21105
NC_015634:3017564:3030763303076330340443282Bacillus coagulans 2-6 chromosome, complete genometype I site-specific deoxyribonuclease5e-21103
NC_004463:5540924:5554605555460555578623258Bradyrhizobium japonicum USDA 110, complete genomeputative type I restriction enzyme7e-21103
NC_007951:4608560:4611434461143446145203087Burkholderia xenovorans LB400 chromosome 1, complete sequenceType I site-specific deoxyribonuclease HsdR1e-20103
NC_012108:2194251:2195556219555621985733018Desulfobacterium autotrophicum HRM2, complete genomeHsdR21e-20102
NC_012968:239476:2425242425242457453222Methylotenera mobilis JLW8, complete genometype I site-specific deoxyribonuclease, HsdR family1e-20102
NC_011831:2213306:2213965221396522169132949Chloroflexus aggregans DSM 9485, complete genometype I site-specific deoxyribonuclease, HsdR family4e-20101
NC_009439:608500:6175046175046207673264Pseudomonas mendocina ymp, complete genomeHsdR family type I site-specific deoxyribonuclease5e-20100
NC_010163:614634:6241646241646273073144Acholeplasma laidlawii PG-8A chromosome, complete genometype I site-specific restriction-modification system, R (restriction) subunit6e-20100
NC_015458:2338437:2365206236520623684303225Pusillimonas sp. T7-7 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease8e-20100
NC_007413:1405817:1412992141299214159162925Anabaena variabilis ATCC 29413, complete genomeType I site-specific deoxyribonuclease HsdR8e-20100
NC_021184:1024305:1026603102660310298363234Desulfotomaculum gibsoniae DSM 7213, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1999.4
NC_004369:256262:2815552815552848543300Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-1999.4
NC_015138:5342473:5346115534611553493183204Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype I site-specific deoxyribonuclease, HsdR family1e-1999.4
NC_012669:4323490:4325841432584143291343294Beutenbergia cavernae DSM 12333, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1999.4
NC_013235:1218378:1227836122783612310363201Nakamurella multipartita DSM 44233, complete genometype I site-specific deoxyribonuclease, HsdR family3e-1998.6
NC_004369:2465461:2476654247665424798543201Corynebacterium efficiens YS-314, complete genomeputative type I restriction-modification system subunit R2e-1998.6
NC_012489:209016:2090162090162121653150Gemmatimonas aurantiaca T-27, complete genometype I restriction-modification system restriction subunit2e-1998.6
NC_020209:4768500:4778873477887347822173345Pseudomonas poae RE*1-1-14, complete genometype I restriction-modification system restriction subunit7e-1997.1
NC_018876:587094:6119046119046148942991Methanolobus psychrophilus R15 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family7e-1997.1
NC_004757:427483:4329294329294360783150Nitrosomonas europaea ATCC 19718, complete genomeRestriction enzyme type I helicase subunits and related helicases9e-1996.7
NC_018868:1352000:1363394136339413664563063Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-1896.3
NC_013222:817686:8330478330478360493003Robiginitalea biformata HTCC2501, complete genomeHsdR1e-1896.3
NC_014315:1396990:1414766141476614179243159Nitrosococcus watsoni C-113 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-1895.9
NC_011149:4677412:4702862470286247059243063Salmonella enterica subsp. enterica serovar Agona str. SL483,type I site-specific deoxyribonuclease, HsdR family2e-1895.9
NC_007298:1418500:1419442141944214226753234Dechloromonas aromatica RCB, complete genomeType I site-specific deoxyribonuclease HsdR3e-1895.1
NC_011662:1:84868486116113126Thauera sp. MZ1T, complete genometype I site-specific deoxyribonuclease, HsdR family7e-1893.6
NC_013959:2449315:2459306245930624625483243Sideroxydans lithotrophicus ES-1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-1893.6
NC_008705:27434:3581135811391373327Mycobacterium sp. KMS, complete genometype I site-specific deoxyribonuclease, HsdR family9e-1893.2
NC_008146:20047:2989629896332223327Mycobacterium sp. MCS, complete genometype I site-specific deoxyribonuclease, HsdR family9e-1893.2
NC_012881:1802000:1817360181736018205903231Desulfovibrio salexigens DSM 2638, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1792.8
NC_011832:1122268:1128539112853911314362898Candidatus Methanosphaerula palustris E1-9c, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1792.8
NC_014366:478000:4983264983265015683243Gamma proteobacterium HdN1, complete genomeType I restriction-modification system restriction subunit2e-1792.4
NC_012483:1813521:1833057183305718362033147Acidobacterium capsulatum ATCC 51196, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1792
NC_002607:81452:9063990639936413003Halobacterium sp. NRC-1, complete genomeRmeR3e-1791.7
NC_010364:84900:9306793067960693003Halobacterium salinarum R1, complete genometype I site-specific deoxyribonuclease subunit rmeR3e-1791.7
NC_014220:1162948:1164843116484311679953153Syntrophothermus lipocalidus DSM 12680 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1790.9
NC_014974:758129:7616407616407645372898Thermus scotoductus SA-01 chromosome, complete genometype I restriction-modification system subunit R7e-1790.5
NC_016629:3789554:3801760380176038048223063Desulfovibrio africanus str. Walvis Bay chromosome, completeHsdR family type I site-specific deoxyribonuclease8e-1790.1
NC_010003:1126800:1139276113927611424793204Petrotoga mobilis SJ95, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1689.7
NC_015177:1476073:1502540150254015056773138Pedobacter saltans DSM 12145 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1689
NC_013411:284461:2947242947242977353012Geobacillus sp. Y412MC61, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1689
NC_014915:2427000:2441753244175324447643012Geobacillus sp. Y412MC52 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1689
NC_010995:4338860:4344576434457643477883213Cellvibrio japonicus Ueda107, complete genomeHsdR3e-1688.6
NC_007644:1694879:1704445170444517073422898Moorella thermoacetica ATCC 39073, complete genometype I site-specific deoxyribonuclease, HsdR family3e-1688.6
NC_006510:1400000:1407300140730014103653066Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity protein2e-1688.6
NC_014165:2928464:2934819293481929380253207Thermobispora bispora DSM 43833 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-1688.6
NC_010682:3313944:3322510332251033254972988Ralstonia pickettii 12J chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family4e-1687.8
NC_014973:3414459:3426539342653934297393201Geobacter sp. M18 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1687.8
NC_015578:1430112:1440645144064514438663222Treponema primitia ZAS-2 chromosome, complete genomeputatIve type i restriction enzyme hindviip r protein4e-1687.8
NC_004578:1190000:1195573119557311986953123Pseudomonas syringae pv. tomato str. DC3000, complete genometype I restriction-modification enzyme, R subunit, putative5e-1687.4
NC_011992:1968258:1985201198520119877682568Acidovorax ebreus TPSY, complete genometype I site-specific deoxyribonuclease, HsdR family7e-1687
NC_007777:4796627:4793298479329847966303333Frankia sp. CcI3, complete genometype I site-specific deoxyribonuclease, HsdR family7e-1687
NC_016002:1048420:1071510107151010748273318Pseudogulbenkiania sp. NH8B, complete genometype I restriction-modification system restriction subunit9e-1686.7
NC_015953:2349503:2371449237144923750393591Streptomyces sp. SirexAA-E chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-1586.3
NC_017278:258921:2767242767242796422919Thermus sp. CCB_US3_UF1 chromosome, complete genomeType I site-specific deoxyribonuclease, HsdR1e-1586.3
NC_008278:5399715:5419387541938754227523366Frankia alni ACN14a, complete genomeType I restriction-modification system R subunit2e-1585.5
NC_018012:598724:6170796170796203183240Thiocystis violascens DSM 198 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-1585.1
NC_015161:1556766:1573953157395315771023150Deinococcus proteolyticus MRP chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-1585.1
NC_015856:1:5728572888383111Collimonas fungivorans Ter331 chromosome, complete genometype I site-specific deoxyribonuclease3e-1584.7
NC_015588:939037:9574719574719607673297Isoptericola variabilis 225 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1584.7
NC_015578:1940097:1954771195477119580073237Treponema primitia ZAS-2 chromosome, complete genomeHsdR4e-1584.3
NC_007969:2885249:2898455289845529016583204Psychrobacter cryohalolentis K5, complete genometype I site-specific deoxyribonuclease, HsdR family6e-1584
NC_012793:1718000:1718140171814017211513012Geobacillus sp. WCH70, complete genometype I site-specific deoxyribonuclease, HsdR family7e-1583.6
NC_016047:2480921:2487836248783624910213186Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetype I restriction-modification system, R subunit1e-1483.2
NC_007969:1664500:1665480166548016686623183Psychrobacter cryohalolentis K5, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1482
NC_005363:3562205:3573462357346235766893228Bdellovibrio bacteriovorus HD100, complete genometype I restriction-modification system restriction subunit2e-1482
NC_015387:1091403:1101507110150711038582352Marinithermus hydrothermalis DSM 14884 chromosome, complete genome5e-1480.9
NC_009725:692237:7022167022167053683153Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein5e-1480.9
NC_015633:2919501:2921615292161529253973783Vibrio anguillarum 775 chromosome chromosome I, complete sequencetype I restriction-modification system restriction2e-1379
NC_016642:757964:7579647579647612603297Pseudovibrio sp. FO-BEG1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-1379
NC_007759:2097734:2118210211821021213413132Syntrophus aciditrophicus SB, complete genometype I restriction-modification system restriction subunit3e-1378.6
NC_017511:884083:8962218962218992473027Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative type I restriction enzyme6e-1273.9
NC_017378:1518529:1523050152305015241261077Helicobacter pylori Puno120 chromosome, complete genometypeI restriction enzyme R protein9e-1273.2
NC_013595:8338619:8348071834807183512893219Streptosporangium roseum DSM 43021, complete genomeHsdR family type I site-specific deoxyribonuclease9e-1273.2
NC_013410:1651000:1665900166590016690223123Fibrobacter succinogenes subsp. succinogenes S85 chromosome,HsdR family type I site-specific deoxyribonuclease1e-1172.8
NC_011206:2369500:2379805237980523828733069Acidithiobacillus ferrooxidans ATCC 53993, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1172.8
NC_011035:968569:9801329801329831583027Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative type I restriction enzyme2e-1172.4
NC_002946:684728:6900606900606930863027Neisseria gonorrhoeae FA 1090, complete genomeputative type I restriction enzyme2e-1172.4
NC_015138:1:1270812708160043297Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype I site-specific deoxyribonuclease, HsdR family2e-1172
NC_011295:1263500:1270521127052112727672247Coprothermobacter proteolyticus DSM 5265, complete genometype I restriction-modification system, R subunit3e-1171.6
NC_005139:2201820:2212470221247022155323063Vibrio vulnificus YJ016 chromosome I, complete sequenceputative type I site-specific restriction-modification system, R (restriction) subunit4e-1171.2
NC_014828:501342:5111395111395141563018Ethanoligenens harbinense YUAN-3 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family6e-1170.5
NC_021177:3627947:3642213364221336452903078Streptomyces fulvissimus DSM 40593, complete genomeRestriction enzyme type I helicase subunits7e-1170.5
NC_017080:3317701:3329289332928933325043216Phycisphaera mikurensis NBRC 102666, complete genometype I restriction-modification system restriction subunit1e-1069.3
NC_002953:15416:3454634546375843039Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative type I restriction enzyme protein8e-1067
NC_013156:226215:2450712450712475212451Methanocaldococcus fervens AG86, complete genomeType I site-specific deoxyribonuclease3e-0965.1
NC_018691:3437821:3451205345120534539882784Alcanivorax dieselolei B5 chromosome, complete genomeType III restriction enzyme, res subunit family4e-0964.3
NC_015497:4564339:4564339456433945676383300Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0759.7
NC_019977:302454:3126153126153153712757Methanomethylovorans hollandica DSM 15978, complete genomehelicase, type I site-specific restriction-modification system restriction subunit3e-0758.5
NC_016610:2077603:2089350208935020920612712Tannerella forsythia ATCC 43037 chromosome, complete genomehelicase C-terminal domain-containing protein3e-0758.2
NC_011144:1073944:1089242108924210916892448Phenylobacterium zucineum HLK1, complete genometype I restriction-modification system, R subunit1e-0656.6
NC_019942:1270060:1304891130489113074132523Aciduliprofundum sp. MAR08-339, complete genomehelicase, type I site-specific restriction-modification system restriction subunit1e-0656.2
NC_015167:3469968:3481685348168534839792295Cellulophaga lytica DSM 7489 chromosome, complete genomeType I site-specific deoxyribonuclease2e-0655.8
NC_014762:890914:8957698957698981202352Sulfuricurvum kujiense DSM 16994 chromosome, complete genometype i site-specific deoxyribonuclease2e-0655.8
NC_020133:2421965:2430257243025724314741218Mycobacterium liflandii 128FXT, complete genome3e-0655.1
NC_012962:4591295:4591295459129545947083414Photorhabdus asymbiotica, complete genomehypothetical protein4e-0654.7
NC_009943:1499111:1500676150067615030392364Candidatus Desulfococcus oleovorans Hxd3, complete genometype III restriction protein res subunit9e-0653.5