Pre_GI: BLASTP Hits

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Query: NC_014169:1784435:1784435 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1784435, End: 1785139, Length: 705

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017221:535000:558199558199558903705Bifidobacterium longum subsp. longum KACC 91563 chromosome,hydrolase5e-132469
NC_010816:2326453:234985123498512350555705Bifidobacterium longum DJO10A, complete genomePutative HAD superfamily hydrolase2e-131468
NC_004307:2208591:223070522307052231409705Bifidobacterium longum NCC2705, complete genomepossible alpha beta hydrolase2e-131468
NC_014638:1139824:114151811415181142147630Bifidobacterium bifidum PRL2010 chromosome, complete genomehaloacid dehalogenase2e-37155
NC_010644:485966:499364499364499972609Elusimicrobium minutum Pei191, complete genomeHAD family hydrolase1e-23109
NC_005296:4574213:457894045789404579608669Rhodopseudomonas palustris CGA009, complete genomeHaloacid dehalogenase-like hydrolase2e-2099.4
NC_003030:3763054:378020237802023780807606Clostridium acetobutylicum ATCC 824, complete genomeHAD superfamily hydrolase4e-1891.3
NC_015687:3766000:378178537817853782390606Clostridium acetobutylicum DSM 1731 chromosome, complete genomeHAD family phosphatase4e-1891.3
NC_017295:3762622:377955437795543780159606Clostridium acetobutylicum EA 2018 chromosome, complete genomeHAD superfamily hydrolase4e-1891.3
NC_018644:637497:642187642187642789603Alpha proteobacterium HIMB59 chromosome, complete genomehaloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED3e-1788.6
NC_010997:830500:844517844517845143627Rhizobium etli CIAT 652 plasmid pC, complete sequenceputative hydrolase protein, haloacid dehalogenase-like family3e-1375.5
NC_000853:648075:674278674278674883606Thermotoga maritima MSB8, complete genomehypothetical protein1e-1170.5
NC_014825:165701:171869171869172483615Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceHAD-superfamily hydrolase, subfamily IA, variant 33e-0858.9