Pre_GI: BLASTP Hits

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Query: NC_014100:2782000:2802744 Caulobacter segnis ATCC 21756 chromosome, complete genome

Start: 2802744, End: 2803247, Length: 504

Host Lineage: Caulobacter segnis; Caulobacter; Caulobacteraceae; Caulobacterales; Proteobacteria; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Habitat: Fresh water. Caulobacter segnis strain ATCC 21756 is a prostheca-less bacterium belonging to the genus Caulobacter; it was isolated from soil although its habitat is considered to be fresh-water. The absence of a stalk in this genus makes this an interesting bacterium to study.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010338:2136193:214052621405262141062537Caulobacter sp. K31, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-26118
NC_011144:2710876:272475927247592725310552Phenylobacterium zucineum HLK1, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-1581.6
NC_014540:2908912:291046129104612911012552Burkholderia sp. CCGE1003 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily5e-1270.1
NC_004757:2657490:265749026574902658047558Nitrosomonas europaea ATCC 19718, complete genomeProbable fecI Specialized sigma subunits of RNA polymerase1e-1168.9
NC_008027:2648560:265202626520262652541516Pseudomonas entomophila L48, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-1168.6
NC_005966:1780468:178413917841391784624486Acinetobacter sp. ADP1, complete genomealternative RNAP sigma factor required for fecA promoter recognition and ferric citrate transport; activated by FecR2e-1168.6
NC_015593:2841856:288400728840072884540534Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeECF subfamily RNA polymerase sigma-24 subunit2e-1168.2
NC_014228:3591758:359930735993073599843537Xenorhabdus nematophila ATCC 19061, complete genomeProbable RNA polymerase sigma factor fecI8e-1166.2
NC_014664:1360524:137481013748101375316507Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1065.9
NC_014640:2693060:269306026930602693566507Achromobacter xylosoxidans A8 chromosome, complete genomeRNA polymerase sigma factor FecI6e-1063.5
NC_008027:4889662:489179248917924892286495Pseudomonas entomophila L48, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-0962
NC_016112:1735044:174948717494871749993507Methylomicrobium alcaliphilum chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0961.6
NC_007953:1088933:108893310889331089469537Burkholderia xenovorans LB400 chromosome 3, complete sequenceSigma-24 (FecI)4e-0960.8
NC_016822:4889656:489396448939644894485522Shigella sonnei 53G, complete genomeRNA polymerase sigma factor FecI5e-0960.5
NC_012759:4433500:445447244544724454993522Escherichia coli BW2952 chromosome, complete genomeRNA polymerase sigma factor FecI5e-0960.5
NC_012962:4591295:459787345978734598394522Photorhabdus asymbiotica, complete genomeprobable rna polymerase sigma factor feci5e-0960.5
NC_010473:4596500:461754546175454618066522Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; RNA polymerase, sigma 19 factor5e-0960.5
AC_000091:4501430:452239445223944522915522Escherichia coli W3110 DNA, complete genomeRNA polymerase, sigma 19 factor5e-0960.5
NC_014640:2693060:269731826973182697830513Achromobacter xylosoxidans A8 chromosome, complete genomeRNA polymerase sigma factor FecI9e-0959.7
NC_015556:2265940:230300923030092303524516Pseudomonas fulva 12-X chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_018691:318662:319603319603320118516Alcanivorax dieselolei B5 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-0858.2
NC_010322:768849:792731792731793237507Pseudomonas putida GB-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor7e-0856.6
NC_005126:5188976:519303851930385193559522Photorhabdus luminescens subsp. laumondii TTO1, complete genomeRNA polymerase sigma-70 factor2e-0755.1
NC_014375:1146328:117242311724231172977555Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.3
NC_018691:1293449:131432713143271314809483Alcanivorax dieselolei B5 chromosome, complete genomeRNA polymerase sigma factor FecI3e-0754.3
NC_017075:1970168:197477419747741975262489Rubrivivax gelatinosus IL144, complete genomeECF subfamily RNA polymerase sigma-70 factor5e-0753.9
NC_007974:934000:953531953531954031501Ralstonia metallidurans CH34 chromosome 2, complete sequencesigma-24 (FecI-like)5e-0753.9
NC_015594:1210736:121573312157331216245513Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeECF subfamily RNA polymerase sigma-24 subunit7e-0753.5
NC_004547:1174650:120912612091261209647522Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeRNA polymerase sigma-70 factor9e-0752.8
NC_019960:260997:265241265241265822582Prevotella dentalis DSM 3688 chromosome 1, complete sequenceRNA polymerase sigma-70 factor, bacteroides expansion family 12e-0652
NC_008686:1592073:161056416105641611091528Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.2
NC_010322:768849:785005785005785511507Pseudomonas putida GB-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor3e-0651.2
NC_016830:2168523:218617921861792186661483Pseudomonas fluorescens F113 chromosome, complete genomeprotein FpvI3e-0651.2
NC_012560:201237:217624217624218127504Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma factor, FecI family3e-0650.8
NC_021150:201237:217624217624218127504Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor, FecI family3e-0650.8
NC_018691:3525430:353820935382093538730522Alcanivorax dieselolei B5 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily4e-0650.8
NC_021150:2546000:254610825461082546812705Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor, FecI family4e-0650.8
NC_012560:2546000:254609625460962546800705Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma factor, FecI family4e-0650.8