Pre_GI: BLASTP Hits

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Query: NC_014034:2253649:2256479 Rhodobacter capsulatus SB1003 chromosome, complete genome

Start: 2256479, End: 2256635, Length: 157

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011985:3892630:3895662389566238971881527Agrobacterium radiobacter K84 chromosome 1, complete genometransposase1e-1995.1
NC_011989:594353:5943535943535959661614Agrobacterium vitis S4 chromosome 1, complete sequencetransposase8e-1992.4
NC_009429:622359:6243206243206259031584Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein6e-1476.3
NC_004463:1898648:1941438194143819430421605Bradyrhizobium japonicum USDA 110, complete genomeputative transposase6e-1372.8
NC_015730:3662934:368046636804663681410945Roseobacter litoralis Och 149 chromosome, complete genome9e-1372
NC_015730:3693391:369612536961253697069945Roseobacter litoralis Och 149 chromosome, complete genome9e-1372
NC_002678:5060670:5063623506362350648161194Mesorhizobium loti MAFF303099, complete genomehypothetical protein9e-1165.5
NC_014664:1560926:1580035158003515816421608Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeputative transposase2e-1064.7
NC_011991:65368:8568685686873051620Agrobacterium vitis S4 plasmid pAtS4b, complete sequencetransposase3e-1063.9
NC_011004:1174813:1177349117734911788771529Rhodopseudomonas palustris TIE-1, complete genome5e-1063.2
NC_011892:77975:1104101104101119271518Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completetransposase IS667e-1062.4
NC_011894:4360577:4384195438419543857121518Methylobacterium nodulans ORS 2060, complete genometransposase IS667e-1062.4
NC_011894:6418000:6419867641986764213841518Methylobacterium nodulans ORS 2060, complete genometransposase IS667e-1062.4
NC_011987:362997:3662893662893678211533Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequencetransposase number 3 for insertion sequence2e-0961.6
NC_011987:53760:7455374553760851533Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequencetransposase number 3 for insertion sequence2e-0961.6
NC_007494:27084:434794347943832354Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence4e-0856.6
NC_009720:5079048:5083951508395150854831533Xanthobacter autotrophicus Py2, complete genometransposase IS669e-0855.5
NC_013353:3627355:3654332365433236556061275Escherichia coli O103:H2 str. 12009, complete genome2e-0754.3
AP010958:3627355:3654332365433236556061275Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-0754.3
AP010958:5090696:5090696509069650919701275Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-0754.3
NC_015186:2197236:226136322613632262217855Acidiphilium multivorum AIU301, complete genomeputative transposase3e-0754.3
NC_013353:5090696:5090696509069650919701275Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-0754.3
NC_013941:3676146:3702425370242537038281404Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransposase-like protein2e-0754.3
NC_002655:3919545:3940813394081339422161404Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc82e-0754.3
NC_002695:3852233:3873500387350038749031404Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-0754.3
NC_011353:3956630:3976582397658239779851404Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-0754.3
NC_013008:3911356:3932623393262339340261404Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-0754.3
CP002797:4603787:4622390462239046240031614Escherichia coli NA114, complete genomeIS-66 transposase4e-0753.5
NC_007626:3522265:3601579360157936031771599Magnetospirillum magneticum AMB-1, complete genomeTransposase and inactivated derivative5e-0753.1
NC_004431:3409389:3453103345310334545841482Escherichia coli CFT073, complete genomeUnknown in ISEc87e-0752.8
NC_011751:3453683:3476115347611534776831569Escherichia coli UMN026 chromosome, complete genome9e-0752.4
NC_007626:418067:4349054349054360561152Magnetospirillum magneticum AMB-1, complete genomeTransposase and inactivated derivative1e-0652
NC_010660:33109:3845938459400511593Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, transposase1e-0652
NC_010658:3622610:3626317362631736279091593Shigella boydii CDC 3083-94, complete genomeIS66 family element, transposase1e-0652
NC_011601:3338888:3365174336517433665771404Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf3 of IS6822e-0651.6
NC_013353:3853082:3871286387128638724161131Escherichia coli O103:H2 str. 12009, complete genome2e-0650.8
AP010958:3853082:3871286387128638724161131Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-0650.8
NC_012586:922095:9220959220959235551461Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceamino-terminus of disrupted transposase4e-0650.1
NC_014029:331919:3936873936873952851599Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-0650.1
NC_009667:2860818:2877892287789228794661575Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencetransposase IS666e-0649.7
NC_004431:3409389:3480993348099334820931101Escherichia coli CFT073, complete genomeUnknown in ISEc86e-0649.7
NC_011751:3453683:3504094350409435051941101Escherichia coli UMN026 chromosome, complete genome6e-0649.7
NC_013854:3200912:320091232009123201790879Azospirillum sp. B510, complete genometransposase7e-0649.3
NC_013857:478000:480000480000480938939Azospirillum sp. B510 plasmid pAB510c, complete sequencetransposase7e-0649.3
NC_010658:1933605:1949452194945219510051554Shigella boydii CDC 3083-94, complete genomeIS66 family element, transposase1e-0548.9