Pre_GI: BLASTP Hits

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Query: NC_014034:1330843:1347028 Rhodobacter capsulatus SB1003 chromosome, complete genome

Start: 1347028, End: 1347285, Length: 258

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009428:807577:825669825669825926258Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeXRE family transcriptional regulator1e-26118
NC_007925:3933765:394934239493423949620279Rhodopseudomonas palustris BisB18, complete genometranscriptional regulator, XRE family3e-1373.9
NC_017249:8510121:854866085486608548896237Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-1270.1
NC_004463:1717890:174528617452861745522237Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein4e-1270.1
NC_020063:1051310:105768110576811057920240Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcription factor, MBF1 like protein9e-1165.5
NC_002678:763808:780697780697780948252Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-1064.3
NC_007626:697926:712256712256712492237Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator1e-0961.6
NC_008687:965152:972058972058972303246Paracoccus denitrificans PD1222 chromosome 2, complete sequencehelix-turn-helix domain protein6e-0959.3
NC_010338:1394550:140713514071351407392258Caulobacter sp. K31, complete genomehelix-turn-helix domain protein7e-0959.3
NC_004547:1062410:107453210745321074786255Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative regulatory protein1e-0858.9
NC_004547:1062410:107419910741991074447249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative regulatory protein1e-0858.9
NC_012962:4942000:494316649431664943414249Photorhabdus asymbiotica, complete genomehypothetical protein3e-0857
NC_005773:5310339:531147853114785311723246Pseudomonas syringae pv. phaseolicola 1448A, complete genomeDNA-binding protein7e-0855.8
NC_005126:3204980:320953832095383209798261Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0755.5
NC_014217:4550544:455986045598604560108249Starkeya novella DSM 506 chromosome, complete genomehelix-turn-helix domain protein2e-0754.7
NC_016845:4498097:451513345151334515378246Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Xre family transcriptional regulator2e-0754.7
NC_012962:4942000:494348549434854944096612Photorhabdus asymbiotica, complete genomehypothetical protein3e-0753.9
NC_014500:3097362:314063831406383140886249Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein3e-0753.9
NC_003911:1265972:127514412751441275398255Silicibacter pomeroyi DSS-3, complete genomeDNA-binding protein, putative4e-0753.1
NC_009952:2217877:223175222317522232006255Dinoroseobacter shibae DFL 12, complete genomehypothetical protein1e-0652
NC_007951:2233676:224693922469392247205267Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional Regulator, XRE family1e-0652
NC_013131:8480384:850444485044448504677234Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, XRE family6e-0649.7
NC_020541:1786500:179882317988231799110288Rhodanobacter sp. 2APBS1, complete genomeputative transcriptional regulator6e-0649.7
NC_007651:3064530:313900931390093139266258Burkholderia thailandensis E264 chromosome I, complete sequenceDNA-binding protein8e-0649.3