Pre_GI: BLASTP Hits

Some Help

Query: NC_014034:1330843:1341665 Rhodobacter capsulatus SB1003 chromosome, complete genome

Start: 1341665, End: 1343008, Length: 1344

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010552:58294:7056570565719651401Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA-directed DNA polymerase (Reverse transcriptase)1e-51204
NC_012968:2000218:2009033200903320104991467Methylotenera mobilis JLW8, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-38158
NC_005773:5636606:5648997564899756504331437Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, putative reverse transcriptase/maturase3e-37156
NC_008209:1097607:110770411077041108630927Roseobacter denitrificans OCh 114, complete genomehypothetical protein1e-36154
NC_013730:778076:7882497882497896341386Spirosoma linguale DSM 74, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-33144
NC_016629:415711:4209054209054222811377Desulfovibrio africanus str. Walvis Bay chromosome, completeRNA-directed DNA polymerase6e-33142
NC_012673:785718:7948927948927962801389Exiguobacterium sp. AT1b, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-32140
NC_010322:1817598:1847667184766718491031437Pseudomonas putida GB-1 chromosome, complete genomeRNA-directed DNA polymerase2e-32140
NC_007907:1940000:1956132195613219574271296Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1170.1
NC_011830:3025437:3041551304155130429601410Desulfitobacterium hafniense DCB-2, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-1169.7
NC_019697:1879769:1893778189377818951931416Chamaesiphon minutus PCC 6605, complete genomeRetron-type reverse transcriptase8e-1168.9
NC_015164:2961906:2984079298407929854161338Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1068.2
NC_015656:1947810:1961959196195919632241266Frankia symbiont of Datisca glomerata chromosome, complete genomeRNA-directed DNA polymerase5e-1065.9
NC_011060:2525367:2541825254182525440082184Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas12e-0964.3
NC_010337:1:2217622176236031428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)3e-0963.5
NC_010337:1051425:1054702105470210561291428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)3e-0963.5
NC_010337:1051425:1056587105658710580141428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)4e-0963.2
NC_002570:126500:1307001307001319561257Bacillus halodurans C-125, complete genometransposase (11)7e-0962.4
NC_016023:1143130:1153368115336811547771410Bacillus coagulans 36D1 chromosome, complete genomeRNA-directed DNA polymerase8e-0962
NC_019902:2372097:2380328238032823815751248Thioalkalivibrio nitratireducens DSM 14787, complete genomeRetron-type reverse transcriptase1e-0861.6
NC_013194:4964000:4991894499189449931561263Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeRNA-directed DNA polymerase (Reverse transcriptase)1e-0861.6
NC_019903:175481:1897791897791911851407Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,Retron-type reverse transcriptase2e-0860.8
NC_013411:3201331:3211428321142832126901263Geobacillus sp. Y412MC61, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0860.5
NC_014915:3207300:3217397321739732186591263Geobacillus sp. Y412MC52 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0860.5
NC_021171:4367834:4374012437401243752561245Bacillus sp. 1NLA3E, complete genomeRNA-directed DNA polymerase5e-0859.7
NC_017338:793024:8022388022388035241287Staphylococcus aureus subsp. aureus JKD6159 chromosome, completereverse transcriptase, group II intron5e-0859.7
NC_013851:949973:9619009619009632551356Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-0859.3
NC_017201:117485:1238691238691251671299Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26,hypothetical protein1e-0758.5
NC_014829:1526401:1533531153353115348561326Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0758.2
NC_010718:1454087:1459727145972714611541428Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0757.8
NC_015958:677500:6866716866716880831413Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeRNA-directed DNA polymerase2e-0757.8
NC_006177:2883476:2925725292572529269871263Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase, N-terminally truncated2e-0757.4
NC_006177:2883476:2925688292568829270081321Symbiobacterium thermophilum IAM 14863, complete genome2e-0757.4
NC_010718:1959517:1966127196612719673951269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0757.4
NC_010718:2513917:2535266253526625365341269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0757.4
NC_013921:1977444:1977444197744419788561413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0757.4
NC_013921:2293411:2294928229492822963401413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0757.4
NC_013921:1396500:1396798139679813982101413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0757.4
NC_013921:1396500:1400425140042514018371413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0757.4
NC_013921:80856:1000881000881015001413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0757.4
NC_010337:616304:6364406364406375641125Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase family protein2e-0757.4
NC_016593:1713000:1726122172612217273811260Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completereverse transcriptase (RNA-dependent DNA polymerase)3e-0757
NC_016593:416661:4367304367304379891260Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completereverse transcriptase (RNA-dependent DNA polymerase)3e-0757
NC_014538:187747:1949691949691963811413Thermoanaerobacter sp. X513 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0757
NC_010320:143109:1551031551031565151413Thermoanaerobacter sp. X514 chromosome, complete genomeRNA-directed DNA polymerase3e-0757
NC_006177:1254635:1256307125630712575961290Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase3e-0757
NC_011059:2272747:2285752228575222869931242Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-0756.6
NC_019970:510632:5207095207095221151407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase4e-0756.2
NC_019970:2551607:2574597257459725760031407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase4e-0756.2
NC_019970:2080419:2095698209569820971041407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase4e-0756.2
NC_010321:2276000:2283171228317122845831413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase4e-0756.2
NC_010321:35855:4561645616470281413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase5e-0756.2
NC_014964:35862:4562345623470351413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase5e-0756.2
NC_014964:923681:9315429315429329541413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase5e-0756.2
NC_014366:3653190:3667976366797636692651290Gamma proteobacterium HdN1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)7e-0755.8
NC_014366:3653190:3655631365563136569201290Gamma proteobacterium HdN1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)7e-0755.8
NC_013385:1064188:1080741108074110820811341Ammonifex degensii KC4, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-0755.8
NC_006177:12383:3152131521328101290Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase6e-0755.8
NC_014655:2092365:2096909209690920981411233Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase1e-0655.1
NC_014655:2092365:2098774209877421000061233Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase (reverse transcriptase)1e-0655.1
NC_020291:5641444:5645748564574856471061359Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeretron-type reverse transcriptase1e-0654.7
NC_018867:993903:1005495100549510067841290Dehalobacter sp. CF chromosome, complete genomeRetron-type reverse transcriptase2e-0654.3
NC_018866:925704:9408749408749421631290Dehalobacter sp. DCA chromosome, complete genomeRetron-type reverse transcriptase2e-0654.3
NC_002939:1021297:1029182102918210304861305Geobacter sulfurreducens PCA, complete genomegroup II intron, maturase3e-0653.9
NC_002939:2697767:2709108270910827104121305Geobacter sulfurreducens PCA, complete genomegroup II intron, maturase3e-0653.9
NC_016935:1636278:1636278163627816376691392Paenibacillus mucilaginosus 3016 chromosome, complete genomeRNA-directed DNA polymerase2e-0653.9
NC_008782:2326439:2354027235402723554481422Acidovorax sp. JS42, complete genomeRNA-directed DNA polymerase2e-0653.9
NC_015697:1480552:1486760148676014881421383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase3e-0653.5
NC_015697:116000:1254021254021267841383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase3e-0653.5
NC_015697:742500:7537557537557551371383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase3e-0653.5
NC_019970:439969:4441624441624455681407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase3e-0653.5
NC_017098:1149145:1161306116130611625891284Spirochaeta africana DSM 8902 chromosome, complete genomeRetron-type reverse transcriptase4e-0653.1
NC_015555:49842:4843948439498451407Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA-directed DNA polymerase (Reverse transcriptase)8e-0652.4
NC_010609:1077453:1088145108814510895271383Lactobacillus reuteri JCM 1112, complete genomereverse transcriptase/maturase1e-0552