Pre_GI: BLASTP Hits

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Query: NC_014012:3812754:3828010 Shewanella violacea DSS12, complete genome

Start: 3828010, End: 3828606, Length: 597

Host Lineage: Shewanella violacea; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella violacea DSS12 was isolated from mud, taken at a depth of 5110 m, from the Ryukyu Trench in the Philippine Sea. Shewanella violacea is psychrophilic and barophilic, with an optimum growth temperature and pressure of 8 degrees C and 30 MPa, respectively. This organism is able to grow at pressures from 0.1 MPa to 70Mpa, however, no growth occurs a temperatures above 20 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009092:261778:270161270161270757597Shewanella loihica PV-4, complete genomephage integrase family protein3e-94343
NC_015942:355944:362190362190362819630Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein1e-51202
NC_015572:2186394:220779522077952208418624Methylomonas methanica MC09 chromosome, complete genomeintegrase family protein1e-50199
NC_012792:962292:971437971437972060624Variovorax paradoxus S110 chromosome 2, complete genomeintegrase family protein6e-50196
NC_007336:66000:825458254583171627Ralstonia eutropha JMP134 megaplasmid, complete sequencePhage integrase9e-50196
NC_017075:1970168:197925419792541979877624Rubrivivax gelatinosus IL144, complete genomephage integrase family protein3e-49194
NC_014910:2779573:278745227874522788075624Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein6e-49193
NC_010170:4739925:475923847592384759852615Bordetella petrii, complete genomehypothetical protein9e-49192
NC_014539:743523:750816750816751442627Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase family protein1e-47189
NC_008740:3520500:355204135520413552655615Marinobacter aquaeolei VT8, complete genomephage integrase family protein9e-48189
NC_020829:940692:982480982480983100621Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase XerC3e-47187
NC_017506:4380196:440114444011444401758615Marinobacter adhaerens HP15 chromosome, complete genomephage integrase family protein5e-47187
NC_013446:2164974:218941721894172190040624Comamonas testosteroni CNB-2, complete genomephage integrase6e-47186
NC_009434:3611738:368162936816293682249621Pseudomonas stutzeri A1501, complete genomephage integrase family site specific recombinase7e-47186
NC_020209:47504:604376043761057621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC1e-46186
NC_015563:4093650:410572541057254106348624Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein2e-46185
NC_008702:2520500:252684025268402527454615Azoarcus sp. BH72, complete genomeputative Tyrosine recombinase xerD2e-46185
NC_020209:47504:858688586886488621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC2e-46185
NC_014394:1626699:163772816377281638342615Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein1e-45182
NC_009952:2752500:275627227562722756904633Dinoroseobacter shibae DFL 12, complete genomehypothetical protein1e-45182
NC_016002:2946702:296022929602292960843615Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein1e-45182
NC_014153:2077647:208438620843862085012627Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein1e-45182
NC_008043:86470:913399133991971633Silicibacter sp. TM1040 mega plasmid, complete sequencephage integrase2e-45181
NC_010511:871905:881963881963882592630Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-45181
NC_011004:4073916:410016341001634100795633Rhodopseudomonas palustris TIE-1, complete genomeintegrase family protein9e-45179
NC_012988:769981:823391823391824020630Methylobacterium extorquens DM4, complete genomeDNA integration/recombination/inversion protein, site-specific recombinase, phage integrase family2e-43174
NC_011757:3540992:354603435460343546663630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein7e-43173
NC_010172:798923:848604848604849233630Methylobacterium extorquens PA1, complete genomeintegrase family protein5e-43173
NC_011757:5048714:507994450799445080573630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein7e-42170
NC_009778:1222273:123099312309931231595603Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-41168
NC_016816:4129299:415125441512544151856603Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family1e-40166
NC_013956:1762171:179168017916801792282603Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-40164
NC_009438:236424:236424236424237026603Shewanella putrefaciens CN-32 chromosome, complete genomephage integrase family protein4e-40164
NC_017047:2042346:206242220624222063024603Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein3e-39160
NC_009512:2238437:224339322433932244109717Pseudomonas putida F1, complete genomephage integrase family protein5e-39160
NC_010510:339879:339879339879340511633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein9e-39159
NC_007722:851129:863700863700864338639Erythrobacter litoralis HTCC2594, complete genomephage integrase family protein2e-38158
NC_010510:339879:352204352204352836633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein3e-38157
NC_011751:3048490:307718430771843077864681Escherichia coli UMN026 chromosome, complete genomesite-specific recombinase, phage integrase family6e-38157
NC_017075:1869326:189689218968921897272381Rubrivivax gelatinosus IL144, complete genomephage integrase family protein4e-29127
NC_016626:1699500:172012117201211720462342Burkholderia sp. YI23 plasmid byi_1p, complete sequenceintegrase family protein6e-27120
NC_008314:477722:499873499873500256384Ralstonia eutropha H16 chromosome 2, complete sequencefragmented site-specific recombinase XerC/XerD1e-26119
NC_017047:2957957:296663329666332967157525Rahnella aquatilis HX2 chromosome, complete genomeintegrase3e-24111
NC_004460:708416:725319725319725558240Vibrio vulnificus CMCP6 chromosome II, complete sequenceIntegrase3e-23108
NC_007404:387827:395122395122395433312Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein3e-2098.2
NC_008314:477722:505403505403505858456Ralstonia eutropha H16 chromosome 2, complete sequencetruncated site-specific recombinase4e-1994.4
NC_014258:42262:537175371754085369Pantoea vagans C9-1 plasmid pPag3, complete sequencehypothetical protein1e-1789.7
NC_010511:871905:876911876911877126216Methylobacterium sp. 4-46 chromosome, complete genome1e-1789.4
NC_008345:4107847:411451241145124114679168Shewanella frigidimarina NCIMB 400, complete genomehypothetical protein1e-1479.3
NC_020260:2725201:273642827364282736793366Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-1272.4
NC_010511:4696868:474309747430974743288192Methylobacterium sp. 4-46 chromosome, complete genome4e-1167.8
NC_008314:477722:505224505224505406183Ralstonia eutropha H16 chromosome 2, complete sequenceTruncated6e-1063.9
NC_010625:1602191:162214016221401622406267Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein8e-0960.5
NC_014650:603500:628630628630629172543Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase3e-0858.5
NC_007907:960104:101699610169961017559564Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0857.8
UCMB5137:1522159:153732315373231537868546Bacillus atrophaeus UCMB-5137putative bacteriophage integrase8e-0857
NC_014916:22644:437804378044349570Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequenceintegrase family protein8e-0857
NC_014500:894136:904367904367904684318Dickeya dadantii 3937 chromosome, complete genomeputative recombinase9e-0856.6
UCMB5137:1522159:153330715333071533849543Bacillus atrophaeus UCMB-5137site-specific recombinase, phage integrase family protein4e-0754.7
NC_016052:2335648:234426723442672344818552Tetragenococcus halophilus NBRC 12172, complete genomeputative site-specific recombinase4e-0754.7
NC_010382:3643288:366613336661333666714582Lysinibacillus sphaericus C3-41, complete genomephage integrase family site specific recombinase6e-0754.3
NC_012563:1681639:170013117001311700736606Clostridium botulinum A2 str. Kyoto, complete genomephage integrase family protein1e-0653.1
NC_008261:1787345:180851718085171809065549Clostridium perfringens ATCC 13124, complete genomesite-specific recombinase, phage integrase family2e-0652
NC_013508:1491945:150146015014601501594135Edwardsiella tarda EIB202, complete genomehypothetical protein3e-0651.6
NC_003485:296140:308140308140308715576Streptococcus pyogenes MGAS8232, complete genomehypothetical protein4e-0651.2
NC_004070:747146:762960762960763535576Streptococcus pyogenes MGAS315, complete genomeputative recombinase - phage associated4e-0651.2
NC_004606:1107500:113322111332211133796576Streptococcus pyogenes SSI-1, complete genomeputative integrase/recombinase, XerC/XerD family4e-0651.2
NC_020207:1614000:162429216242921624864573Enterococcus faecium NRRL B-2354, complete genomesite-specific recombinase4e-0651.2
NC_020272:1311932:133478513347851335327543Bacillus amyloliquefaciens IT-45, complete genomesite-specific tyrosine recombinase5e-0651.2
NC_012796:985000:998898998898999455558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0550.1