Pre_GI: BLASTP Hits

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Query: NC_013943:1019213:1032995 Denitrovibrio acetiphilus DSM 12809 chromosome, complete genome

Start: 1032995, End: 1033477, Length: 483

Host Lineage: Denitrovibrio acetiphilus; Denitrovibrio; Deferribacteraceae; Deferribacterales; Deferribacteres; Bacteria

General Information: Isolation: Oil reservoir model column; Country: Norway; Temp: Mesophile; Habitat: Fresh water, Marine. This organism was first isolated from an oil reservoir modeling column under nitrate enrichment and reduces nitrate to ammonia. Stimulating the growth of nitrate-reducing bacterium in an oil well may prevent the growth of sulfate-reducing bacterium which cause reservoir souring by the production of H2S.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015311:720631:726166726166726678513Prevotella denticola F0289 chromosome, complete genomeSigma-70 region 23e-1787.4
NC_016109:5290000:529044352904435291108666Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor1e-1582
NC_014758:10687:185401854018992453Calditerrivibrio nitroreducens DSM 19672 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily3e-1477.4
NC_003909:1205605:122684212268421227327486Bacillus cereus ATCC 10987, complete genomeRNA polymerase sigma-70 factor4e-1477
NC_004663:4373902:437668943766894377198510Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor2e-1374.7
NC_016627:762000:776639776639777193555Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor5e-1270.1
NC_016631:3114000:313063631306363131205570Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit6e-1269.7
NC_004193:1335626:133948713394871340014528Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase ECF-type sigma factor9e-1269.3
NC_008536:5192235:520295352029535203483531Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1065.5
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit2e-1064.7
NC_009012:3224000:322403932240393224593555Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1063.5
NC_009615:3581619:358324535832453583757513Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor1e-0962.4
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor1e-0962.4
NC_015436:440033:442515442515443042528Spirochaeta coccoides DSM 17374 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0961.2
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0961.2
NC_011830:3369282:338259733825973383103507Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0961.2
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE4e-0960.8
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0960.8
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU6e-0960.1
NC_016627:4270949:428432542843254284810486Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0858.9
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW1e-0858.9
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W1e-0858.9
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W1e-0858.9
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW1e-0858.9
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor1e-0858.9
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW1e-0858.9
NC_015953:4908069:492497149249714925813843Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0858.9
NC_014650:1942935:196065919606591961171513Geobacillus sp. Y4.1MC1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0858.9
NC_010161:2050816:207017720701772070731555Bartonella tribocorum CIP 105476, complete genomeRNA polymerase sigma factor1e-0858.9
NC_003450:788000:804408804408805028621Corynebacterium glutamicum ATCC 13032, complete genomeRNA polymerase sigma factor RpoE2e-0858.5
NC_009342:951761:964659964659965279621Corynebacterium glutamicum R chromosome, complete genomeRNA polymerase sigma factor RpoE2e-0858.5
NC_012811:139498:143577143577144257681Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0858.5
NC_011757:1067543:107244910724491073129681Methylobacterium chloromethanicum CM4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0858.5
NC_009012:2953638:301233430123343012897564Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.2
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor2e-0857.8
NC_018679:2211000:223032922303292230931603Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeECF subfamily RNA polymerase sigma-24 factor3e-0857.8
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H4e-0857.4
NC_014932:1232346:130281113028111303365555Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma factor, ecr subfamily4e-0857.4
NC_005966:1780468:178413917841391784624486Acinetobacter sp. ADP1, complete genomealternative RNAP sigma factor required for fecA promoter recognition and ferric citrate transport; activated by FecR4e-0857
NC_009921:4757148:477616347761634776723561Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857
NC_012590:193895:211507211507212055549Corynebacterium aurimucosum ATCC 700975, complete genomeECF-family sigma factor C6e-0856.6
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0856.6
NC_015172:1075592:107559210755921076101510Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0856.6
NC_005956:1572500:159013115901311590685555Bartonella henselae str. Houston-1, complete genomeRNA polymerase sigma-70 factor8e-0856.2
NC_017075:1970168:197477419747741975262489Rubrivivax gelatinosus IL144, complete genomeECF subfamily RNA polymerase sigma-70 factor7e-0856.2
NC_016776:1470596:149332214933221493837516Bacteroides fragilis 638R, complete genomeputative RNA polymerase ECF-type sigma factor9e-0855.8
NC_010320:671699:672453672453672983531Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase sigma factor SigY1e-0755.8
NC_012811:959725:963246963246963947702Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase ECF-type sigma factor1e-0755.8
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor2e-0755.5
NC_015589:3241364:324630432463043246867564Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0755.5
NC_012846:1888000:190443319044331904987555Bartonella grahamii as4aup, complete genomeRNA polymerase sigma factor1e-0755.5
NC_012673:1540000:154720815472081547783576Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.1
NC_007907:2306561:230812823081282308652525Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0755.1
NC_016048:2907702:297798929779892978513525Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase ECF subfamily sigma factor2e-0755.1
NC_020301:1486695:150583015058301506384555Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeRNA polymerase sigma factor2e-0755.1
NC_019897:3810000:385687138568713857380510Thermobacillus composti KWC4 chromosome, complete genomeSigM family RNA polymerase sigma factor2e-0755.1
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)3e-0754.7
NC_007517:3151742:315661031566103157230621Geobacter metallireducens GS-15, complete genomeRNA polymerase sigma-70 factor3e-0754.7
NC_015966:1145974:116775911677591168322564Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0754.7
NC_017243:424132:440723440723441268546Brachyspira intermedia PWS/A chromosome, complete genomeR polymerase sigma-70 factor 22e-0754.7
NC_019896:1483073:148418814841881484718531Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA polymerase sigma factor SigZ3e-0754.3
NC_004663:3801071:380107138010713801646576Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor3e-0754.3
NC_009614:1071548:108075110807511081263513Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase ECF-type sigma factor3e-0754.3
NC_009668:1726000:173066117306611731212552Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceECF subfamily RNA polymerase sigma-24 factor3e-0754.3
NC_015160:3749636:375426437542643754857594Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.3
NC_014311:1106871:112273411227341123375642Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor, sigma-243e-0754.3
NC_008536:2961460:296649229664922967064573Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0753.9
NC_012912:1200000:122636512263651226940576Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0753.9
NC_012796:1645856:164776616477661648332567Desulfovibrio magneticus RS-1, complete genomeRNA polymerase ECF-type sigma factor4e-0753.9
NC_014375:1146328:117242311724231172977555Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0753.5
NC_010510:139685:160605160605161294690Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0753.5
NC_011830:1190502:120506412050641205564501Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0753.5
NC_012880:3241886:326005132600513260626576Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0753.1
NC_012225:1657248:166270016627001663245546Brachyspira hyodysenteriae WA1, complete genomeR polymerase sigma-70 factor 27e-0753.1
NC_010322:768849:792731792731793237507Pseudomonas putida GB-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-0652.8
NC_020300:1344453:136080613608061361360555Bartonella australis Aust/NH1, complete genomeRNA polymerase sigma factor1e-0652.8
NC_016622:1599681:160103816010381601589552Azospirillum lipoferum 4B, complete genomeECF family sigma factor1e-0652.4
AC_000091:4501430:452239445223944522915522Escherichia coli W3110 DNA, complete genomeRNA polymerase, sigma 19 factor2e-0652
NC_010473:4596500:461754546175454618066522Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; RNA polymerase, sigma 19 factor2e-0652
NC_012759:4433500:445447244544724454993522Escherichia coli BW2952 chromosome, complete genomeRNA polymerase sigma factor FecI2e-0652
NC_016822:4889656:489396448939644894485522Shigella sonnei 53G, complete genomeRNA polymerase sigma factor FecI2e-0652
NC_016627:689406:701226701226701768543Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0652
NC_012982:711122:746813746813747382570Hirschia baltica ATCC 49814, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0651.6
NC_012491:1187864:119296911929691193538570Brevibacillus brevis NBRC 100599, complete genomeRNA polymerase ECF-type sigma factor2e-0651.6
NC_014933:602312:614199614199614702504Bacteroides helcogenes P 36-108 chromosome, complete genomeRNA polymerase, sigma subunit, ECF family3e-0651.2
NC_017273:352150:380081380081380596516Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completeECF subfamily RNA polymerase sigma-24 subunit3e-0651.2
NC_021150:201237:217624217624218127504Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor, FecI family2e-0651.2
NC_012560:201237:217624217624218127504Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma factor, FecI family2e-0651.2
NC_007951:2206263:220626322062632207000738Burkholderia xenovorans LB400 chromosome 1, complete sequenceSigma-24 (FecI)2e-0651.2
NC_010172:480000:497599497599498279681Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0651.2
NC_010162:3177324:317671931767193177327609Sorangium cellulosum 'So ce 56', complete genomeECF family RNA polymerase sigma factor3e-0650.8
NC_015577:383071:383071383071383628558Treponema azotonutricium ZAS-9 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-0650.4
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0650.4
NC_015277:5211779:522919252291925229782591Sphingobacterium sp. 21 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0650.1
NC_014483:4740214:475311047531104753685576Paenibacillus polymyxa E681 chromosome, complete genomeDNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein5e-0650.1
NC_021184:4095276:411103041110304111635606Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family7e-0649.7