Pre_GI: BLASTP Hits

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Query: NC_013941:699286:713302 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 713302, End: 713685, Length: 384

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:531000:545846545846546229384Escherichia coli B str. REL606 chromosome, complete genomeputative antitermination protein2e-70263
NC_012947:3231893:323945032394503239833384Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeantitermination Q family protein2e-70263
NC_011751:643976:660844660844661227384Escherichia coli UMN026 chromosome, complete genomeputative antitermination protein Q-like protein; DLP12 prophage2e-70263
NC_000913:558920:573179573179573562384Escherichia coli K12, complete genomeDLP12 prophage; predicted antitermination protein1e-69260
NC_010473:498252:512511512511512894384Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted antitermination protein1e-69260
CU928145:824367:836045836045836428384Escherichia coli 55989 chromosome, complete genomeputative antitermination protein Q homolog; DLP12 prophage1e-69260
AC_000091:558920:573179573179573562384Escherichia coli W3110 DNA, complete genomepredicted antitermination protein1e-69260
NC_011748:824367:836045836045836428384Escherichia coli 55989, complete genomeputative antitermination protein Q homolog; DLP12 prophage1e-69260
NC_012759:461680:475939475939476322384Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative antitermination protein1e-69260
NC_011742:1177946:119687911968791197262384Escherichia coli S88 chromosome, complete genomeantitermination protein Q3e-68256
NC_008563:1175035:119335711933571193740384Escherichia coli APEC O1, complete genomeantitermination protein Q-like protein3e-68256
NC_007946:1239278:125595512559551256353399Escherichia coli UTI89, complete genomelambdoid prophage DLP12 antitermination protein Q-like protein4e-68256
NC_004431:1401681:141942014194201419818399Escherichia coli CFT073, complete genomeAntitermination protein Q homolog from lambdoid prophage DLP124e-68256
NC_011415:2153243:215451321545132154896384Escherichia coli SE11 chromosome, complete genomeputative phage antitermination protein1e-61234
NC_011740:2769961:277950927795092779901393Escherichia fergusonii ATCC 35469, complete genomeputative antitermination protein Q homolog; DLP12 prophage1e-57221
NC_011751:1405381:142486214248621425254393Escherichia coli UMN026 chromosome, complete genomeputative antitermination protein Q-like protein; DLP12 prophage3e-57219
NC_012947:2189533:219279821927982193175378Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeantitermination Q family protein1e-56218
NC_009800:1657550:167335316733531673730378Escherichia coli HS, complete genomephage antitermination Q type 1 family1e-56218
NC_013008:2910567:291966629196662920100435Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantitermination protein Q of bacteriophage2e-56217
NC_011353:2957962:296479529647952965229435Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantitermination protein Q2e-56217
NC_013361:1558423:157854315785431578977435Escherichia coli O26:H11 str. 11368 chromosome, complete genomelate gene regulator Q5e-56216
NC_011745:3245000:325088132508813251273393Escherichia coli ED1a chromosome, complete genomeAntitermination protein Q from prophage3e-56216
NC_016822:3065426:306786630678663068252387Shigella sonnei 53G, complete genomeantitermination protein Q-like protein3e-55213
NC_007384:2933625:293656229365622936948387Shigella sonnei Ss046, complete genomeantitermination protein Q-like protein3e-55213
NC_002655:1332961:135107213510721351506435Escherichia coli O157:H7 EDL933, complete genomeantitermination protein Q of bacteriophage BP-933W3e-54209
NC_013364:3312379:333313233331323333566435Escherichia coli O111:H- str. 11128, complete genomeputative late gene regulator Q3e-53206
NC_013892:2005480:200646020064602006879420Xenorhabdus bovienii SS-2004 chromosome, complete genomeDLP12 prophage; antitermination protein Q6e-50195
NC_007712:2028500:207390420739042074269366Sodalis glossinidius str. 'morsitans', complete genomephage antitermination protein1e-36151
NC_010658:1933605:195794919579491958329381Shigella boydii CDC 3083-94, complete genomephage antitermination Q type 1 family2e-29127
NC_003197:2327474:233918423391842339552369Salmonella typhimurium LT2, complete genomeputative phage antiterminator7e-27119
NC_016810:2325190:233690023369002337268369Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein7e-27119
NC_016857:2325190:233690023369002337268369Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative phage antiterminator7e-27119
NC_016863:2324293:233892923389292339297369Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage antiterminator7e-27119
NC_010102:683444:706260706260706625366Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-27119
NC_016856:2379027:239073723907372391102366Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phage antiterminator7e-27119
NC_016860:2323017:233472723347272335092366Salmonella enterica subsp. enterica serovar Typhimurium strputative phage antiterminator7e-27119
NC_016612:3803130:382259638225963822940345Klebsiella oxytoca KCTC 1686 chromosome, complete genomeantitermination protein from phage origin2e-26117
NC_015224:2095816:210684221068422107261420Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phage antitermination protein2e-25114
NC_017060:59500:973869738697733348Rahnella aquatilis HX2 plasmid PRA1, complete sequenceantitermination protein from phage origin3e-25114
NC_008800:2013450:202082920208292021248420Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phage antitermination protein8e-25112
NC_017047:1906000:191302719130271913380354Rahnella aquatilis HX2 chromosome, complete genomeantitermination protein from phage origin2e-24110
NC_011283:3379181:341122534112253411569345Klebsiella pneumoniae 342 chromosome, complete genomeantitermination protein Q1e-23108
NC_014562:1772842:178064217806421781175534Pantoea vagans C9-1 chromosome, complete genomeAntitermination protein Q6e-23105
NC_013941:3182576:318698331869833187405423Escherichia coli O55:H7 str. CB9615 chromosome, complete genometranscriptional regulator3e-22103
NC_014228:3282500:332272133227213323098378Xenorhabdus nematophila ATCC 19061, complete genomeputative antitermination protein Q9e-22102
NC_009708:2537557:254690925469092547355447Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage antitermination protein Q8e-22102
NC_014838:218000:236913236913237341429Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceantitermination Q family protein8e-22102
NC_013961:3413011:342919234291923429554363Erwinia amylovora, complete genomeAntitermination protein Q6e-22102
NC_013971:335247:341828341828342190363Erwinia amylovora ATCC 49946 chromosome, complete genomephage antitermination protein6e-22102
NC_015968:3301958:330667533066753307079405Enterobacter asburiae LF7a chromosome, complete genomeantitermination Q family protein2e-1891.3
NC_006155:172313:183509183509183880372Yersinia pseudotuberculosis IP 32953, complete genomeprobable phage antitermination protein Q2e-1374.3
NC_010634:166900:178101178101178472372Yersinia pseudotuberculosis PB1/+, complete genomeputative phage antitermination protein Q2e-1374.3